data_2O5Z # _model_server_result.job_id 6yYL38ojeIY-jsKUWYkarA _model_server_result.datetime_utc '2024-11-26 08:22:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2o5z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":313}' # _entry.id 2O5Z # _exptl.entry_id 2O5Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 23 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2O5Z _cell.length_a 127.328 _cell.length_b 127.328 _cell.length_c 91.963 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2O5Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA,PQS dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 2 1,2 B,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,BA 3 1,2 A,C,D,E,F,G,H,I,J,K,L,AA 3 3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_554 x-y,-y,-z-1/3 1 0 0 0 -1 0 0 0 -1 0 0 -30.654333 3 'crystal symmetry operation' 3_654 -x+y+1,-x,z-1/3 -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 127.328 0 -30.654333 4 'crystal symmetry operation' 4_655 y+1,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 127.328 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 93 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? disulf ? disulf2 A SG CYS 139 L CYS 134 1_555 A SG CYS 199 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? disulf ? disulf4 B SG CYS 146 H CYS 142 1_555 B SG CYS 202 H CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 342 n n S O2 SO4 doub 343 n n S O3 SO4 sing 344 n n S O4 SO4 sing 345 n n # _atom_sites.entry_id 2O5Z _atom_sites.fract_transf_matrix[1][1] 0.007854 _atom_sites.fract_transf_matrix[1][2] 0.004534 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009069 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010874 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 L 1 302 2 SO4 SO4 . D 3 SO4 L 1 304 4 SO4 SO4 . E 3 SO4 L 1 305 5 SO4 SO4 . F 3 SO4 L 1 308 8 SO4 SO4 . G 3 SO4 L 1 311 11 SO4 SO4 . H 3 SO4 L 1 312 12 SO4 SO4 . I 3 SO4 L 1 314 14 SO4 SO4 . J 3 SO4 L 1 316 16 SO4 SO4 . K 3 SO4 L 1 319 19 SO4 SO4 . L 3 SO4 L 1 322 22 SO4 SO4 . M 3 SO4 H 1 301 1 SO4 SO4 . N 3 SO4 H 1 303 3 SO4 SO4 . O 3 SO4 H 1 306 6 SO4 SO4 . P 3 SO4 H 1 307 7 SO4 SO4 . Q 3 SO4 H 1 309 9 SO4 SO4 . R 3 SO4 H 1 310 10 SO4 SO4 . S 3 SO4 H 1 313 13 SO4 SO4 . T 3 SO4 H 1 315 15 SO4 SO4 . U 3 SO4 H 1 317 17 SO4 SO4 . V 3 SO4 H 1 318 18 SO4 SO4 . W 3 SO4 H 1 320 20 SO4 SO4 . X 3 SO4 H 1 321 21 SO4 SO4 . Y 3 SO4 H 1 323 23 SO4 SO4 . Z 4 ANO H 1 501 1 ANO ANO . AA 5 HOH L 1 323 2 HOH HOH . AA 5 HOH L 2 324 4 HOH HOH . AA 5 HOH L 3 325 5 HOH HOH . AA 5 HOH L 4 326 8 HOH HOH . AA 5 HOH L 5 327 9 HOH HOH . AA 5 HOH L 6 328 10 HOH HOH . AA 5 HOH L 7 329 11 HOH HOH . AA 5 HOH L 8 330 12 HOH HOH . AA 5 HOH L 9 331 13 HOH HOH . AA 5 HOH L 10 332 14 HOH HOH . AA 5 HOH L 11 333 16 HOH HOH . AA 5 HOH L 12 334 17 HOH HOH . AA 5 HOH L 13 335 21 HOH HOH . AA 5 HOH L 14 336 23 HOH HOH . AA 5 HOH L 15 337 24 HOH HOH . AA 5 HOH L 16 338 26 HOH HOH . AA 5 HOH L 17 339 32 HOH HOH . AA 5 HOH L 18 340 33 HOH HOH . AA 5 HOH L 19 341 35 HOH HOH . AA 5 HOH L 20 342 36 HOH HOH . AA 5 HOH L 21 343 38 HOH HOH . AA 5 HOH L 22 344 40 HOH HOH . AA 5 HOH L 23 345 44 HOH HOH . AA 5 HOH L 24 346 45 HOH HOH . AA 5 HOH L 25 347 46 HOH HOH . AA 5 HOH L 26 348 49 HOH HOH . AA 5 HOH L 27 349 50 HOH HOH . AA 5 HOH L 28 350 60 HOH HOH . AA 5 HOH L 29 351 61 HOH HOH . AA 5 HOH L 30 352 63 HOH HOH . AA 5 HOH L 31 353 66 HOH HOH . AA 5 HOH L 32 354 69 HOH HOH . AA 5 HOH L 33 355 70 HOH HOH . AA 5 HOH L 34 356 71 HOH HOH . AA 5 HOH L 35 357 73 HOH HOH . AA 5 HOH L 36 358 74 HOH HOH . AA 5 HOH L 37 359 82 HOH HOH . AA 5 HOH L 38 360 84 HOH HOH . AA 5 HOH L 39 361 86 HOH HOH . AA 5 HOH L 40 362 88 HOH HOH . AA 5 HOH L 41 363 89 HOH HOH . AA 5 HOH L 42 364 91 HOH HOH . AA 5 HOH L 43 365 93 HOH HOH . AA 5 HOH L 44 366 94 HOH HOH . AA 5 HOH L 45 367 96 HOH HOH . AA 5 HOH L 46 368 99 HOH HOH . AA 5 HOH L 47 369 101 HOH HOH . AA 5 HOH L 48 370 103 HOH HOH . AA 5 HOH L 49 371 106 HOH HOH . AA 5 HOH L 50 372 109 HOH HOH . AA 5 HOH L 51 373 110 HOH HOH . AA 5 HOH L 52 374 111 HOH HOH . AA 5 HOH L 53 375 113 HOH HOH . AA 5 HOH L 54 376 114 HOH HOH . AA 5 HOH L 55 377 115 HOH HOH . AA 5 HOH L 56 378 117 HOH HOH . AA 5 HOH L 57 379 118 HOH HOH . AA 5 HOH L 58 380 119 HOH HOH . AA 5 HOH L 59 381 121 HOH HOH . AA 5 HOH L 60 382 123 HOH HOH . AA 5 HOH L 61 383 124 HOH HOH . AA 5 HOH L 62 384 125 HOH HOH . AA 5 HOH L 63 385 126 HOH HOH . AA 5 HOH L 64 386 130 HOH HOH . AA 5 HOH L 65 387 131 HOH HOH . AA 5 HOH L 66 388 136 HOH HOH . AA 5 HOH L 67 389 137 HOH HOH . AA 5 HOH L 68 390 138 HOH HOH . AA 5 HOH L 69 391 142 HOH HOH . AA 5 HOH L 70 392 144 HOH HOH . AA 5 HOH L 71 393 146 HOH HOH . AA 5 HOH L 72 394 148 HOH HOH . AA 5 HOH L 73 395 149 HOH HOH . AA 5 HOH L 74 396 150 HOH HOH . AA 5 HOH L 75 397 154 HOH HOH . AA 5 HOH L 76 398 155 HOH HOH . AA 5 HOH L 77 399 156 HOH HOH . AA 5 HOH L 78 400 157 HOH HOH . AA 5 HOH L 79 401 158 HOH HOH . AA 5 HOH L 80 402 159 HOH HOH . AA 5 HOH L 81 403 162 HOH HOH . AA 5 HOH L 82 404 164 HOH HOH . AA 5 HOH L 83 405 169 HOH HOH . AA 5 HOH L 84 406 170 HOH HOH . AA 5 HOH L 85 407 171 HOH HOH . AA 5 HOH L 86 408 172 HOH HOH . AA 5 HOH L 87 409 174 HOH HOH . BA 5 HOH H 1 324 1 HOH HOH . BA 5 HOH H 2 325 3 HOH HOH . BA 5 HOH H 3 326 6 HOH HOH . BA 5 HOH H 4 327 7 HOH HOH . BA 5 HOH H 5 328 15 HOH HOH . BA 5 HOH H 6 329 18 HOH HOH . BA 5 HOH H 7 330 19 HOH HOH . BA 5 HOH H 8 331 20 HOH HOH . BA 5 HOH H 9 332 22 HOH HOH . BA 5 HOH H 10 333 25 HOH HOH . BA 5 HOH H 11 334 27 HOH HOH . BA 5 HOH H 12 335 28 HOH HOH . BA 5 HOH H 13 336 29 HOH HOH . BA 5 HOH H 14 337 30 HOH HOH . BA 5 HOH H 15 338 31 HOH HOH . BA 5 HOH H 16 339 34 HOH HOH . BA 5 HOH H 17 340 37 HOH HOH . BA 5 HOH H 18 341 39 HOH HOH . BA 5 HOH H 19 342 41 HOH HOH . BA 5 HOH H 20 343 42 HOH HOH . BA 5 HOH H 21 344 43 HOH HOH . BA 5 HOH H 22 345 47 HOH HOH . BA 5 HOH H 23 346 48 HOH HOH . BA 5 HOH H 24 347 51 HOH HOH . BA 5 HOH H 25 348 52 HOH HOH . BA 5 HOH H 26 349 53 HOH HOH . BA 5 HOH H 27 350 54 HOH HOH . BA 5 HOH H 28 351 55 HOH HOH . BA 5 HOH H 29 352 56 HOH HOH . BA 5 HOH H 30 353 57 HOH HOH . BA 5 HOH H 31 354 58 HOH HOH . BA 5 HOH H 32 355 59 HOH HOH . BA 5 HOH H 33 356 62 HOH HOH . BA 5 HOH H 34 357 64 HOH HOH . BA 5 HOH H 35 358 65 HOH HOH . BA 5 HOH H 36 359 67 HOH HOH . BA 5 HOH H 37 360 68 HOH HOH . BA 5 HOH H 38 361 72 HOH HOH . BA 5 HOH H 39 362 75 HOH HOH . BA 5 HOH H 40 363 76 HOH HOH . BA 5 HOH H 41 364 77 HOH HOH . BA 5 HOH H 42 365 78 HOH HOH . BA 5 HOH H 43 366 79 HOH HOH . BA 5 HOH H 44 367 80 HOH HOH . BA 5 HOH H 45 368 81 HOH HOH . BA 5 HOH H 46 369 83 HOH HOH . BA 5 HOH H 47 370 85 HOH HOH . BA 5 HOH H 48 371 87 HOH HOH . BA 5 HOH H 49 372 90 HOH HOH . BA 5 HOH H 50 373 92 HOH HOH . BA 5 HOH H 51 374 95 HOH HOH . BA 5 HOH H 52 375 97 HOH HOH . BA 5 HOH H 53 376 98 HOH HOH . BA 5 HOH H 54 377 100 HOH HOH . BA 5 HOH H 55 378 102 HOH HOH . BA 5 HOH H 56 379 104 HOH HOH . BA 5 HOH H 57 380 105 HOH HOH . BA 5 HOH H 58 381 107 HOH HOH . BA 5 HOH H 59 382 108 HOH HOH . BA 5 HOH H 60 383 112 HOH HOH . BA 5 HOH H 61 384 116 HOH HOH . BA 5 HOH H 62 385 120 HOH HOH . BA 5 HOH H 63 386 122 HOH HOH . BA 5 HOH H 64 387 127 HOH HOH . BA 5 HOH H 65 388 128 HOH HOH . BA 5 HOH H 66 389 129 HOH HOH . BA 5 HOH H 67 390 132 HOH HOH . BA 5 HOH H 68 391 133 HOH HOH . BA 5 HOH H 69 392 134 HOH HOH . BA 5 HOH H 70 393 135 HOH HOH . BA 5 HOH H 71 394 139 HOH HOH . BA 5 HOH H 72 395 140 HOH HOH . BA 5 HOH H 73 396 141 HOH HOH . BA 5 HOH H 74 397 143 HOH HOH . BA 5 HOH H 75 398 145 HOH HOH . BA 5 HOH H 76 399 147 HOH HOH . BA 5 HOH H 77 400 151 HOH HOH . BA 5 HOH H 78 401 152 HOH HOH . BA 5 HOH H 79 402 153 HOH HOH . BA 5 HOH H 80 403 160 HOH HOH . BA 5 HOH H 81 404 161 HOH HOH . BA 5 HOH H 82 405 163 HOH HOH . BA 5 HOH H 83 406 165 HOH HOH . BA 5 HOH H 84 407 166 HOH HOH . BA 5 HOH H 85 408 167 HOH HOH . BA 5 HOH H 86 409 168 HOH HOH . BA 5 HOH H 87 410 173 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . S 3 58.234 -2.514 -51.082 0.5 49.51 ? S SO4 313 H 1 HETATM 2 O O1 SO4 . . . S 3 59.676 -2.438 -50.834 0.5 43.73 ? O1 SO4 313 H 1 HETATM 3 O O2 SO4 . . . S 3 57.619 -1.3 -50.542 0.5 49.95 ? O2 SO4 313 H 1 HETATM 4 O O3 SO4 . . . S 3 57.563 -3.663 -50.454 0.5 31.93 ? O3 SO4 313 H 1 HETATM 5 O O4 SO4 . . . S 3 58.078 -2.588 -52.536 0.5 39.87 ? O4 SO4 313 H 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #