data_2O63 # _model_server_result.job_id fBsTDxL4sL6rtpEP24Vsdg _model_server_result.datetime_utc '2024-11-22 23:55:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2o63 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 2O63 # _exptl.entry_id 2O63 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2O63 _cell.length_a 98.711 _cell.length_b 98.711 _cell.length_c 80.596 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2O63 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 173 n y N1 C5 IMD sing 174 n y N1 HN1 IMD sing 175 n n C2 N3 IMD doub 176 n y C2 H2 IMD sing 177 n n N3 C4 IMD sing 178 n y N3 HN3 IMD sing 179 n n C4 C5 IMD doub 180 n y C4 H4 IMD sing 181 n n C5 H5 IMD sing 182 n n # _atom_sites.entry_id 2O63 _atom_sites.fract_transf_matrix[1][1] 0.010131 _atom_sites.fract_transf_matrix[1][2] 0.005849 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011698 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012408 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMD A 1 401 1 IMD IMD . C 2 IMD A 1 402 2 IMD IMD . D 2 IMD A 1 403 3 IMD IMD . E 3 MYC A 1 501 1 MYC MYC . F 4 HOH A 1 502 1 HOH HOH . F 4 HOH A 2 503 2 HOH HOH . F 4 HOH A 3 504 3 HOH HOH . F 4 HOH A 4 505 4 HOH HOH . F 4 HOH A 5 506 5 HOH HOH . F 4 HOH A 6 507 6 HOH HOH . F 4 HOH A 7 508 7 HOH HOH . F 4 HOH A 8 509 8 HOH HOH . F 4 HOH A 9 510 9 HOH HOH . F 4 HOH A 10 511 10 HOH HOH . F 4 HOH A 11 512 11 HOH HOH . F 4 HOH A 12 513 12 HOH HOH . F 4 HOH A 13 514 13 HOH HOH . F 4 HOH A 14 515 14 HOH HOH . F 4 HOH A 15 516 15 HOH HOH . F 4 HOH A 16 517 16 HOH HOH . F 4 HOH A 17 518 17 HOH HOH . F 4 HOH A 18 519 18 HOH HOH . F 4 HOH A 19 520 19 HOH HOH . F 4 HOH A 20 521 20 HOH HOH . F 4 HOH A 21 522 21 HOH HOH . F 4 HOH A 22 523 22 HOH HOH . F 4 HOH A 23 524 23 HOH HOH . F 4 HOH A 24 525 24 HOH HOH . F 4 HOH A 25 526 25 HOH HOH . F 4 HOH A 26 527 26 HOH HOH . F 4 HOH A 27 528 27 HOH HOH . F 4 HOH A 28 529 28 HOH HOH . F 4 HOH A 29 530 29 HOH HOH . F 4 HOH A 30 531 30 HOH HOH . F 4 HOH A 31 532 31 HOH HOH . F 4 HOH A 32 533 32 HOH HOH . F 4 HOH A 33 534 33 HOH HOH . F 4 HOH A 34 535 34 HOH HOH . F 4 HOH A 35 536 35 HOH HOH . F 4 HOH A 36 537 36 HOH HOH . F 4 HOH A 37 538 37 HOH HOH . F 4 HOH A 38 539 38 HOH HOH . F 4 HOH A 39 540 39 HOH HOH . F 4 HOH A 40 541 40 HOH HOH . F 4 HOH A 41 542 41 HOH HOH . F 4 HOH A 42 543 42 HOH HOH . F 4 HOH A 43 544 43 HOH HOH . F 4 HOH A 44 545 44 HOH HOH . F 4 HOH A 45 546 45 HOH HOH . F 4 HOH A 46 547 46 HOH HOH . F 4 HOH A 47 548 47 HOH HOH . F 4 HOH A 48 549 48 HOH HOH . F 4 HOH A 49 550 49 HOH HOH . F 4 HOH A 50 551 50 HOH HOH . F 4 HOH A 51 552 51 HOH HOH . F 4 HOH A 52 553 52 HOH HOH . F 4 HOH A 53 554 53 HOH HOH . F 4 HOH A 54 555 54 HOH HOH . F 4 HOH A 55 556 55 HOH HOH . F 4 HOH A 56 557 56 HOH HOH . F 4 HOH A 57 558 57 HOH HOH . F 4 HOH A 58 559 58 HOH HOH . F 4 HOH A 59 560 59 HOH HOH . F 4 HOH A 60 561 60 HOH HOH . F 4 HOH A 61 562 61 HOH HOH . F 4 HOH A 62 563 62 HOH HOH . F 4 HOH A 63 564 63 HOH HOH . F 4 HOH A 64 565 64 HOH HOH . F 4 HOH A 65 566 65 HOH HOH . F 4 HOH A 66 567 66 HOH HOH . F 4 HOH A 67 568 67 HOH HOH . F 4 HOH A 68 569 68 HOH HOH . F 4 HOH A 69 570 69 HOH HOH . F 4 HOH A 70 571 70 HOH HOH . F 4 HOH A 71 572 71 HOH HOH . F 4 HOH A 72 573 72 HOH HOH . F 4 HOH A 73 574 73 HOH HOH . F 4 HOH A 74 575 74 HOH HOH . F 4 HOH A 75 576 75 HOH HOH . F 4 HOH A 76 577 76 HOH HOH . F 4 HOH A 77 578 77 HOH HOH . F 4 HOH A 78 579 78 HOH HOH . F 4 HOH A 79 580 79 HOH HOH . F 4 HOH A 80 581 80 HOH HOH . F 4 HOH A 81 582 81 HOH HOH . F 4 HOH A 82 583 82 HOH HOH . F 4 HOH A 83 584 83 HOH HOH . F 4 HOH A 84 585 84 HOH HOH . F 4 HOH A 85 586 85 HOH HOH . F 4 HOH A 86 587 86 HOH HOH . F 4 HOH A 87 588 87 HOH HOH . F 4 HOH A 88 589 88 HOH HOH . F 4 HOH A 89 590 89 HOH HOH . F 4 HOH A 90 591 90 HOH HOH . F 4 HOH A 91 592 91 HOH HOH . F 4 HOH A 92 593 92 HOH HOH . F 4 HOH A 93 594 93 HOH HOH . F 4 HOH A 94 595 94 HOH HOH . F 4 HOH A 95 596 95 HOH HOH . F 4 HOH A 96 597 96 HOH HOH . F 4 HOH A 97 598 97 HOH HOH . F 4 HOH A 98 599 98 HOH HOH . F 4 HOH A 99 600 99 HOH HOH . F 4 HOH A 100 601 100 HOH HOH . F 4 HOH A 101 602 101 HOH HOH . F 4 HOH A 102 603 102 HOH HOH . F 4 HOH A 103 604 103 HOH HOH . F 4 HOH A 104 605 104 HOH HOH . F 4 HOH A 105 606 105 HOH HOH . F 4 HOH A 106 607 106 HOH HOH . F 4 HOH A 107 608 107 HOH HOH . F 4 HOH A 108 609 108 HOH HOH . F 4 HOH A 109 610 109 HOH HOH . F 4 HOH A 110 611 110 HOH HOH . F 4 HOH A 111 612 111 HOH HOH . F 4 HOH A 112 613 112 HOH HOH . F 4 HOH A 113 614 113 HOH HOH . F 4 HOH A 114 615 114 HOH HOH . F 4 HOH A 115 616 115 HOH HOH . F 4 HOH A 116 617 116 HOH HOH . F 4 HOH A 117 618 117 HOH HOH . F 4 HOH A 118 619 118 HOH HOH . F 4 HOH A 119 620 119 HOH HOH . F 4 HOH A 120 621 120 HOH HOH . F 4 HOH A 121 622 121 HOH HOH . F 4 HOH A 122 623 122 HOH HOH . F 4 HOH A 123 624 123 HOH HOH . F 4 HOH A 124 625 124 HOH HOH . F 4 HOH A 125 626 125 HOH HOH . F 4 HOH A 126 627 126 HOH HOH . F 4 HOH A 127 628 127 HOH HOH . F 4 HOH A 128 629 128 HOH HOH . F 4 HOH A 129 630 129 HOH HOH . F 4 HOH A 130 631 130 HOH HOH . F 4 HOH A 131 632 131 HOH HOH . F 4 HOH A 132 633 132 HOH HOH . F 4 HOH A 133 634 133 HOH HOH . F 4 HOH A 134 635 134 HOH HOH . F 4 HOH A 135 636 135 HOH HOH . F 4 HOH A 136 637 136 HOH HOH . F 4 HOH A 137 638 137 HOH HOH . F 4 HOH A 138 639 138 HOH HOH . F 4 HOH A 139 640 139 HOH HOH . F 4 HOH A 140 641 140 HOH HOH . F 4 HOH A 141 642 141 HOH HOH . F 4 HOH A 142 643 142 HOH HOH . F 4 HOH A 143 644 143 HOH HOH . F 4 HOH A 144 645 144 HOH HOH . F 4 HOH A 145 646 145 HOH HOH . F 4 HOH A 146 647 146 HOH HOH . F 4 HOH A 147 648 147 HOH HOH . F 4 HOH A 148 649 148 HOH HOH . F 4 HOH A 149 650 149 HOH HOH . F 4 HOH A 150 651 150 HOH HOH . F 4 HOH A 151 652 151 HOH HOH . F 4 HOH A 152 653 152 HOH HOH . F 4 HOH A 153 654 153 HOH HOH . F 4 HOH A 154 655 154 HOH HOH . F 4 HOH A 155 656 155 HOH HOH . F 4 HOH A 156 657 156 HOH HOH . F 4 HOH A 157 658 157 HOH HOH . F 4 HOH A 158 659 158 HOH HOH . F 4 HOH A 159 660 159 HOH HOH . F 4 HOH A 160 661 160 HOH HOH . F 4 HOH A 161 662 161 HOH HOH . F 4 HOH A 162 663 162 HOH HOH . F 4 HOH A 163 664 163 HOH HOH . F 4 HOH A 164 665 164 HOH HOH . F 4 HOH A 165 666 165 HOH HOH . F 4 HOH A 166 667 166 HOH HOH . F 4 HOH A 167 668 167 HOH HOH . F 4 HOH A 168 669 168 HOH HOH . F 4 HOH A 169 670 169 HOH HOH . F 4 HOH A 170 671 170 HOH HOH . F 4 HOH A 171 672 171 HOH HOH . F 4 HOH A 172 673 172 HOH HOH . F 4 HOH A 173 674 173 HOH HOH . F 4 HOH A 174 675 174 HOH HOH . F 4 HOH A 175 676 175 HOH HOH . F 4 HOH A 176 677 176 HOH HOH . F 4 HOH A 177 678 177 HOH HOH . F 4 HOH A 178 679 178 HOH HOH . F 4 HOH A 179 680 179 HOH HOH . F 4 HOH A 180 681 180 HOH HOH . F 4 HOH A 181 682 181 HOH HOH . F 4 HOH A 182 683 182 HOH HOH . F 4 HOH A 183 684 183 HOH HOH . F 4 HOH A 184 685 184 HOH HOH . F 4 HOH A 185 686 185 HOH HOH . F 4 HOH A 186 687 186 HOH HOH . F 4 HOH A 187 688 187 HOH HOH . F 4 HOH A 188 689 188 HOH HOH . F 4 HOH A 189 690 189 HOH HOH . F 4 HOH A 190 691 190 HOH HOH . F 4 HOH A 191 692 191 HOH HOH . F 4 HOH A 192 693 192 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . D 2 60.462 12.67 -7.215 1 41.71 ? N1 IMD 403 A 1 HETATM 2 C C2 IMD . . . D 2 60.536 12.123 -6.003 1 41.33 ? C2 IMD 403 A 1 HETATM 3 N N3 IMD . . . D 2 59.601 11.174 -5.863 1 40.1 ? N3 IMD 403 A 1 HETATM 4 C C4 IMD . . . D 2 58.93 11.12 -7.031 1 42.12 ? C4 IMD 403 A 1 HETATM 5 C C5 IMD . . . D 2 59.474 12.053 -7.891 1 42.68 ? C5 IMD 403 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 5 #