data_2O6H # _model_server_result.job_id od4BCnspok2q-DV3bjQDBQ _model_server_result.datetime_utc '2024-11-26 02:06:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2o6h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":302}' # _entry.id 2O6H # _exptl.entry_id 2O6H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2O6H _cell.length_a 97.649 _cell.length_b 97.649 _cell.length_c 175.4 _cell.Z_PDB 30 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2O6H _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA,PQS pentameric 5 author_and_software_defined_assembly 1 PISA decameric 10 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 116.933333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 I N N ? 2 K N N ? 2 L N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ALA 67 A ALA 67 1_555 F CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.111 ? metalc ? metalc2 A OE1 GLU 73 A GLU 73 1_555 F CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.94 ? metalc ? metalc3 A OE1 GLU 124 A GLU 124 1_555 G CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.914 ? metalc ? metalc4 A OE2 GLU 124 A GLU 124 1_555 G CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.008 ? metalc ? metalc5 F CA CA . A CA 301 1_555 E O ALA 67 E ALA 67 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.936 ? metalc ? metalc6 F CA CA . A CA 301 1_555 E OE1 GLU 73 E GLU 73 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.075 ? metalc ? metalc7 Q O HOH . A HOH 404 6_655 L CA CA . C CA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.002 ? metalc ? metalc8 B O ALA 67 B ALA 67 1_555 I CA CA . B CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.96 ? metalc ? metalc9 B OE1 GLU 73 B GLU 73 1_555 I CA CA . B CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? metalc ? metalc10 I CA CA . B CA 303 1_555 D O ALA 67 D ALA 67 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.008 ? metalc ? metalc11 I CA CA . B CA 303 1_555 D OE1 GLU 73 D GLU 73 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.855 ? metalc ? metalc12 C O ALA 67 C ALA 67 1_555 K CA CA . C CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? metalc ? metalc13 C OE1 GLU 73 C GLU 73 1_555 K CA CA . C CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.087 ? metalc ? metalc14 C OE1 GLU 73 C GLU 73 6_555 K CA CA . C CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? metalc ? metalc15 C OE1 GLU 124 C GLU 124 1_555 L CA CA . C CA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.835 ? metalc ? metalc16 C OE2 GLU 124 C GLU 124 1_555 L CA CA . C CA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.933 ? metalc ? metalc17 D OD1 ASP 24 D ASP 24 1_555 N CA CA . D CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.224 ? metalc ? metalc18 D OD1 ASP 25 D ASP 25 4_556 N CA CA . D CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.067 ? metalc ? metalc19 D OD2 ASP 28 D ASP 28 4_556 N CA CA . D CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? metalc ? metalc20 N CA CA . D CA 306 1_555 T O HOH . D HOH 484 4_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.968 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2O6H _atom_sites.fract_transf_matrix[1][1] 0.010241 _atom_sites.fract_transf_matrix[1][2] 0.005913 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011825 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005701 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 CA A 1 301 301 CA CA . G 2 CA A 1 302 302 CA CA . H 3 INI A 1 201 201 INI INI . I 2 CA B 1 303 303 CA CA . J 3 INI B 1 202 202 INI INI . K 2 CA C 1 304 304 CA CA . L 2 CA C 1 305 305 CA CA . M 3 INI C 1 203 203 INI INI . N 2 CA D 1 306 306 CA CA . O 3 INI D 1 204 204 INI INI . P 3 INI E 1 205 205 INI INI . Q 4 HOH A 1 401 401 HOH HOH . Q 4 HOH A 2 403 403 HOH HOH . Q 4 HOH A 3 404 404 HOH HOH . Q 4 HOH A 4 405 405 HOH HOH . Q 4 HOH A 5 406 406 HOH HOH . Q 4 HOH A 6 407 407 HOH HOH . Q 4 HOH A 7 408 408 HOH HOH . Q 4 HOH A 8 411 411 HOH HOH . Q 4 HOH A 9 412 412 HOH HOH . Q 4 HOH A 10 414 414 HOH HOH . Q 4 HOH A 11 416 416 HOH HOH . Q 4 HOH A 12 420 420 HOH HOH . Q 4 HOH A 13 421 421 HOH HOH . Q 4 HOH A 14 475 475 HOH HOH . Q 4 HOH A 15 476 476 HOH HOH . Q 4 HOH A 16 477 477 HOH HOH . Q 4 HOH A 17 479 479 HOH HOH . R 4 HOH B 1 415 415 HOH HOH . R 4 HOH B 2 417 417 HOH HOH . R 4 HOH B 3 418 418 HOH HOH . R 4 HOH B 4 419 419 HOH HOH . R 4 HOH B 5 422 422 HOH HOH . R 4 HOH B 6 423 423 HOH HOH . R 4 HOH B 7 424 424 HOH HOH . R 4 HOH B 8 425 425 HOH HOH . R 4 HOH B 9 426 426 HOH HOH . R 4 HOH B 10 427 427 HOH HOH . R 4 HOH B 11 428 428 HOH HOH . R 4 HOH B 12 429 429 HOH HOH . R 4 HOH B 13 430 430 HOH HOH . R 4 HOH B 14 431 431 HOH HOH . R 4 HOH B 15 433 433 HOH HOH . R 4 HOH B 16 434 434 HOH HOH . R 4 HOH B 17 435 435 HOH HOH . R 4 HOH B 18 480 480 HOH HOH . R 4 HOH B 19 481 481 HOH HOH . R 4 HOH B 20 482 482 HOH HOH . R 4 HOH B 21 483 483 HOH HOH . S 4 HOH C 1 432 432 HOH HOH . S 4 HOH C 2 436 436 HOH HOH . S 4 HOH C 3 437 437 HOH HOH . S 4 HOH C 4 438 438 HOH HOH . S 4 HOH C 5 439 439 HOH HOH . S 4 HOH C 6 440 440 HOH HOH . S 4 HOH C 7 441 441 HOH HOH . S 4 HOH C 8 442 442 HOH HOH . S 4 HOH C 9 443 443 HOH HOH . S 4 HOH C 10 444 444 HOH HOH . S 4 HOH C 11 445 445 HOH HOH . S 4 HOH C 12 446 446 HOH HOH . S 4 HOH C 13 478 478 HOH HOH . T 4 HOH D 1 447 447 HOH HOH . T 4 HOH D 2 448 448 HOH HOH . T 4 HOH D 3 449 449 HOH HOH . T 4 HOH D 4 450 450 HOH HOH . T 4 HOH D 5 451 451 HOH HOH . T 4 HOH D 6 452 452 HOH HOH . T 4 HOH D 7 454 454 HOH HOH . T 4 HOH D 8 455 455 HOH HOH . T 4 HOH D 9 456 456 HOH HOH . T 4 HOH D 10 457 457 HOH HOH . T 4 HOH D 11 458 458 HOH HOH . T 4 HOH D 12 460 460 HOH HOH . T 4 HOH D 13 469 469 HOH HOH . T 4 HOH D 14 474 474 HOH HOH . T 4 HOH D 15 484 484 HOH HOH . T 4 HOH D 16 486 486 HOH HOH . T 4 HOH D 17 487 487 HOH HOH . U 4 HOH E 1 402 402 HOH HOH . U 4 HOH E 2 409 409 HOH HOH . U 4 HOH E 3 410 410 HOH HOH . U 4 HOH E 4 413 413 HOH HOH . U 4 HOH E 5 453 453 HOH HOH . U 4 HOH E 6 459 459 HOH HOH . U 4 HOH E 7 461 461 HOH HOH . U 4 HOH E 8 462 462 HOH HOH . U 4 HOH E 9 463 463 HOH HOH . U 4 HOH E 10 464 464 HOH HOH . U 4 HOH E 11 465 465 HOH HOH . U 4 HOH E 12 466 466 HOH HOH . U 4 HOH E 13 467 467 HOH HOH . U 4 HOH E 14 468 468 HOH HOH . U 4 HOH E 15 470 470 HOH HOH . U 4 HOH E 16 471 471 HOH HOH . U 4 HOH E 17 472 472 HOH HOH . U 4 HOH E 18 473 473 HOH HOH . U 4 HOH E 19 485 485 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x 18.045 _atom_site.Cartn_y 69.369 _atom_site.Cartn_z 53.078 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.91 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #