data_2O9J # _model_server_result.job_id 5VdN7k5FPPGXh52gcB_CaQ _model_server_result.datetime_utc '2024-11-06 01:33:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2o9j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1001}' # _entry.id 2O9J # _exptl.entry_id 2O9J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 336.384 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "(6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.1 _cell.angle_gamma 90 _cell.entry_id 2O9J _cell.length_a 175.383 _cell.length_b 69.875 _cell.length_c 143.411 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2O9J _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 876 A CYS 876 1_555 A SG CYS 888 A CYS 888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 A OD2 ASP 351 A ASP 351 1_555 B MG MG . A MG 995 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc2 A OD1 ASP 351 A ASP 351 1_555 D MG MF4 . A MF4 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc3 A O THR 353 A THR 353 1_555 B MG MG . A MG 995 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.909 ? metalc ? metalc4 A OD1 ASP 703 A ASP 703 1_555 B MG MG . A MG 995 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.85 ? metalc ? metalc5 A OD2 ASP 703 A ASP 703 1_555 B MG MG . A MG 995 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.084 ? metalc ? metalc6 A O LYS 712 A LYS 712 1_555 C NA NA . A NA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? metalc ? metalc7 A O ALA 714 A ALA 714 1_555 C NA NA . A NA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? metalc ? metalc8 B MG MG . A MG 995 1_555 D F4 MF4 . A MF4 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc9 B MG MG . A MG 995 1_555 F O HOH . A HOH 2061 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc10 B MG MG . A MG 995 1_555 F O HOH . A HOH 2071 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? # _chem_comp.formula 'C20 H20 N2 O3' _chem_comp.formula_weight 336.384 _chem_comp.id CZA _chem_comp.mon_nstd_flag . _chem_comp.name "(6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C6 CZA doub 83 n n C6 C3 CZA sing 84 n n C6 C5 CZA sing 85 n n C3 C4 CZA doub 86 n n C3 C2 CZA sing 87 n n C2 C1 CZA sing 88 n n C2 O1 CZA doub 89 n n C1 H11 CZA sing 90 n n C1 H12 CZA sing 91 n n C1 H13 CZA sing 92 n n C5 N1 CZA sing 93 n n C5 C7 CZA sing 94 n n C5 H5 CZA sing 95 n n C7 C8 CZA sing 96 n n C7 C15 CZA sing 97 n n C7 H7 CZA sing 98 n n C15 C14 CZA sing 99 n y C15 C16 CZA doub 100 n y C16 N2 CZA sing 101 n y C16 H161 CZA sing 102 n n N2 C17 CZA sing 103 n y N2 HN2 CZA sing 104 n n C17 C14 CZA sing 105 n y C17 C18 CZA doub 106 n y C14 C13 CZA doub 107 n y C18 C19 CZA sing 108 n y C18 H18 CZA sing 109 n n C19 C20 CZA doub 110 n y C19 H19 CZA sing 111 n n C20 C13 CZA sing 112 n y C20 H20 CZA sing 113 n n C13 C12 CZA sing 114 n n C12 C8 CZA sing 115 n n C12 H121 CZA sing 116 n n C12 H122 CZA sing 117 n n C8 C9 CZA sing 118 n n C8 H8 CZA sing 119 n n C9 C10 CZA sing 120 n n C9 C11 CZA sing 121 n n C9 N1 CZA sing 122 n n C10 H101 CZA sing 123 n n C10 H102 CZA sing 124 n n C10 H103 CZA sing 125 n n C11 H111 CZA sing 126 n n C11 H112 CZA sing 127 n n C11 H113 CZA sing 128 n n N1 C4 CZA sing 129 n n C4 O3 CZA sing 130 n n O3 HO3 CZA sing 131 n n # _atom_sites.entry_id 2O9J _atom_sites.fract_transf_matrix[1][1] 0.005702 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001754 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014311 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007295 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 995 995 MG MG . C 3 NA A 1 997 997 NA NA . D 4 MF4 A 1 996 996 MF4 MF4 . E 5 CZA A 1 1001 1001 CZA CZA . F 6 HOH A 1 2001 2001 HOH HOH . F 6 HOH A 2 2002 2002 HOH HOH . F 6 HOH A 3 2003 2003 HOH HOH . F 6 HOH A 4 2004 2004 HOH HOH . F 6 HOH A 5 2005 2005 HOH HOH . F 6 HOH A 6 2006 2006 HOH HOH . F 6 HOH A 7 2007 2007 HOH HOH . F 6 HOH A 8 2008 2008 HOH HOH . F 6 HOH A 9 2009 2009 HOH HOH . F 6 HOH A 10 2010 2010 HOH HOH . F 6 HOH A 11 2011 2011 HOH HOH . F 6 HOH A 12 2012 2012 HOH HOH . F 6 HOH A 13 2013 2013 HOH HOH . F 6 HOH A 14 2014 2014 HOH HOH . F 6 HOH A 15 2015 2015 HOH HOH . F 6 HOH A 16 2016 2016 HOH HOH . F 6 HOH A 17 2017 2017 HOH HOH . F 6 HOH A 18 2018 2018 HOH HOH . F 6 HOH A 19 2019 2019 HOH HOH . F 6 HOH A 20 2020 2020 HOH HOH . F 6 HOH A 21 2021 2021 HOH HOH . F 6 HOH A 22 2022 2022 HOH HOH . F 6 HOH A 23 2023 2023 HOH HOH . F 6 HOH A 24 2024 2024 HOH HOH . F 6 HOH A 25 2025 2025 HOH HOH . F 6 HOH A 26 2026 2026 HOH HOH . F 6 HOH A 27 2027 2027 HOH HOH . F 6 HOH A 28 2028 2028 HOH HOH . F 6 HOH A 29 2029 2029 HOH HOH . F 6 HOH A 30 2030 2030 HOH HOH . F 6 HOH A 31 2031 2031 HOH HOH . F 6 HOH A 32 2032 2032 HOH HOH . F 6 HOH A 33 2033 2033 HOH HOH . F 6 HOH A 34 2034 2034 HOH HOH . F 6 HOH A 35 2035 2035 HOH HOH . F 6 HOH A 36 2036 2036 HOH HOH . F 6 HOH A 37 2037 2037 HOH HOH . F 6 HOH A 38 2038 2038 HOH HOH . F 6 HOH A 39 2039 2039 HOH HOH . F 6 HOH A 40 2040 2040 HOH HOH . F 6 HOH A 41 2041 2041 HOH HOH . F 6 HOH A 42 2042 2042 HOH HOH . F 6 HOH A 43 2043 2043 HOH HOH . F 6 HOH A 44 2044 2044 HOH HOH . F 6 HOH A 45 2045 2045 HOH HOH . F 6 HOH A 46 2046 2046 HOH HOH . F 6 HOH A 47 2047 2047 HOH HOH . F 6 HOH A 48 2048 2048 HOH HOH . F 6 HOH A 49 2049 2049 HOH HOH . F 6 HOH A 50 2050 2050 HOH HOH . F 6 HOH A 51 2051 2051 HOH HOH . F 6 HOH A 52 2052 2052 HOH HOH . F 6 HOH A 53 2053 2053 HOH HOH . F 6 HOH A 54 2054 2054 HOH HOH . F 6 HOH A 55 2055 2055 HOH HOH . F 6 HOH A 56 2056 2056 HOH HOH . F 6 HOH A 57 2057 2057 HOH HOH . F 6 HOH A 58 2058 2058 HOH HOH . F 6 HOH A 59 2059 2059 HOH HOH . F 6 HOH A 60 2060 2060 HOH HOH . F 6 HOH A 61 2061 2061 HOH HOH . F 6 HOH A 62 2062 2062 HOH HOH . F 6 HOH A 63 2063 2063 HOH HOH . F 6 HOH A 64 2064 2064 HOH HOH . F 6 HOH A 65 2065 2065 HOH HOH . F 6 HOH A 66 2066 2066 HOH HOH . F 6 HOH A 67 2067 2067 HOH HOH . F 6 HOH A 68 2068 2068 HOH HOH . F 6 HOH A 69 2069 2069 HOH HOH . F 6 HOH A 70 2070 2070 HOH HOH . F 6 HOH A 71 2071 2071 HOH HOH . F 6 HOH A 72 2072 2072 HOH HOH . F 6 HOH A 73 2073 2073 HOH HOH . F 6 HOH A 74 2074 2074 HOH HOH . F 6 HOH A 75 2075 2075 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 CZA . . . E 5 34.308 10.523 13.553 1 90.97 ? O2 CZA 1001 A 1 HETATM 2 C C6 CZA . . . E 5 34.159 11.013 12.368 1 90.6 ? C6 CZA 1001 A 1 HETATM 3 C C3 CZA . . . E 5 35.319 11.073 11.434 1 90.66 ? C3 CZA 1001 A 1 HETATM 4 C C2 CZA . . . E 5 36.709 10.575 11.598 1 91.28 ? C2 CZA 1001 A 1 HETATM 5 O O1 CZA . . . E 5 37.329 10.838 12.62 1 92.17 ? O1 CZA 1001 A 1 HETATM 6 C C1 CZA . . . E 5 37.265 9.764 10.459 1 91.1 ? C1 CZA 1001 A 1 HETATM 7 C C5 CZA . . . E 5 32.876 11.632 11.939 1 90.21 ? C5 CZA 1001 A 1 HETATM 8 C C7 CZA . . . E 5 31.682 10.867 11.381 1 89.73 ? C7 CZA 1001 A 1 HETATM 9 C C15 CZA . . . E 5 30.642 10.674 12.415 1 89.62 ? C15 CZA 1001 A 1 HETATM 10 C C16 CZA . . . E 5 30.667 9.798 13.481 1 89.65 ? C16 CZA 1001 A 1 HETATM 11 N N2 CZA . . . E 5 29.476 10.031 14.11 1 89.47 ? N2 CZA 1001 A 1 HETATM 12 C C17 CZA . . . E 5 28.767 10.996 13.465 1 89.39 ? C17 CZA 1001 A 1 HETATM 13 C C14 CZA . . . E 5 29.508 11.414 12.376 1 89.4 ? C14 CZA 1001 A 1 HETATM 14 C C18 CZA . . . E 5 27.528 11.601 13.673 1 89.44 ? C18 CZA 1001 A 1 HETATM 15 C C19 CZA . . . E 5 27.078 12.593 12.791 1 89.37 ? C19 CZA 1001 A 1 HETATM 16 C C20 CZA . . . E 5 27.854 12.991 11.699 1 89.18 ? C20 CZA 1001 A 1 HETATM 17 C C13 CZA . . . E 5 29.088 12.38 11.501 1 89.52 ? C13 CZA 1001 A 1 HETATM 18 C C12 CZA . . . E 5 30.014 12.722 10.361 1 89.82 ? C12 CZA 1001 A 1 HETATM 19 C C8 CZA . . . E 5 31.212 11.762 10.193 1 89.75 ? C8 CZA 1001 A 1 HETATM 20 C C9 CZA . . . E 5 32.414 12.606 9.753 1 89.95 ? C9 CZA 1001 A 1 HETATM 21 C C10 CZA . . . E 5 32.725 12.375 8.278 1 89.55 ? C10 CZA 1001 A 1 HETATM 22 C C11 CZA . . . E 5 32.176 14.082 10.039 1 89.92 ? C11 CZA 1001 A 1 HETATM 23 N N1 CZA . . . E 5 33.44 12.024 10.632 1 90.21 ? N1 CZA 1001 A 1 HETATM 24 C C4 CZA . . . E 5 34.692 11.738 10.264 1 90.41 ? C4 CZA 1001 A 1 HETATM 25 O O3 CZA . . . E 5 35.348 12.064 8.978 1 90.42 ? O3 CZA 1001 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 25 #