data_2OBM # _model_server_result.job_id cUcNdTcpkc3coxN8UTVYwg _model_server_result.datetime_utc '2025-04-10 16:24:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2obm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 2OBM # _exptl.entry_id 2OBM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2OBM _cell.length_a 84.131 _cell.length_b 78.69 _cell.length_c 53.07 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OBM _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 229 A ASN 328 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? metalc ? metalc2 A OD1 ASN 229 A ASN 328 2_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? metalc ? metalc3 A OD1 ASP 234 A ASP 333 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? metalc ? metalc4 A OD1 ASP 234 A ASP 333 2_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc5 B CA CA . A CA 1001 1_555 D O HOH . A HOH 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc6 B CA CA . A CA 1001 1_555 D O HOH . A HOH 1003 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2OBM _atom_sites.fract_transf_matrix[1][1] 0.011886 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012708 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018843 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 1001 1001 CA CA . C 3 ADP A 1 600 600 ADP ADP . D 4 HOH A 1 1002 1 HOH HOH . D 4 HOH A 2 1003 2 HOH HOH . D 4 HOH A 3 1004 3 HOH HOH . D 4 HOH A 4 1005 4 HOH HOH . D 4 HOH A 5 1006 5 HOH HOH . D 4 HOH A 6 1007 7 HOH HOH . D 4 HOH A 7 1008 8 HOH HOH . D 4 HOH A 8 1009 9 HOH HOH . D 4 HOH A 9 1010 10 HOH HOH . D 4 HOH A 10 1011 11 HOH HOH . D 4 HOH A 11 1012 12 HOH HOH . D 4 HOH A 12 1013 14 HOH HOH . D 4 HOH A 13 1014 15 HOH HOH . D 4 HOH A 14 1015 16 HOH HOH . D 4 HOH A 15 1016 19 HOH HOH . D 4 HOH A 16 1017 20 HOH HOH . D 4 HOH A 17 1018 21 HOH HOH . D 4 HOH A 18 1019 22 HOH HOH . D 4 HOH A 19 1020 23 HOH HOH . D 4 HOH A 20 1021 24 HOH HOH . D 4 HOH A 21 1022 26 HOH HOH . D 4 HOH A 22 1023 29 HOH HOH . D 4 HOH A 23 1024 31 HOH HOH . D 4 HOH A 24 1025 34 HOH HOH . D 4 HOH A 25 1026 35 HOH HOH . D 4 HOH A 26 1027 36 HOH HOH . D 4 HOH A 27 1028 37 HOH HOH . D 4 HOH A 28 1029 38 HOH HOH . D 4 HOH A 29 1030 39 HOH HOH . D 4 HOH A 30 1031 41 HOH HOH . D 4 HOH A 31 1032 42 HOH HOH . D 4 HOH A 32 1033 43 HOH HOH . D 4 HOH A 33 1034 44 HOH HOH . D 4 HOH A 34 1035 45 HOH HOH . D 4 HOH A 35 1036 46 HOH HOH . D 4 HOH A 36 1037 51 HOH HOH . D 4 HOH A 37 1038 54 HOH HOH . D 4 HOH A 38 1039 57 HOH HOH . D 4 HOH A 39 1040 62 HOH HOH . D 4 HOH A 40 1041 65 HOH HOH . D 4 HOH A 41 1042 68 HOH HOH . D 4 HOH A 42 1043 72 HOH HOH . D 4 HOH A 43 1044 77 HOH HOH . D 4 HOH A 44 1045 80 HOH HOH . D 4 HOH A 45 1046 81 HOH HOH . D 4 HOH A 46 1047 84 HOH HOH . D 4 HOH A 47 1048 86 HOH HOH . D 4 HOH A 48 1049 87 HOH HOH . D 4 HOH A 49 1050 88 HOH HOH . D 4 HOH A 50 1051 91 HOH HOH . D 4 HOH A 51 1052 95 HOH HOH . D 4 HOH A 52 1053 109 HOH HOH . D 4 HOH A 53 1054 112 HOH HOH . D 4 HOH A 54 1055 114 HOH HOH . D 4 HOH A 55 1056 117 HOH HOH . D 4 HOH A 56 1057 142 HOH HOH . D 4 HOH A 57 1058 147 HOH HOH . D 4 HOH A 58 1059 155 HOH HOH . D 4 HOH A 59 1060 156 HOH HOH . D 4 HOH A 60 1061 157 HOH HOH . D 4 HOH A 61 1062 158 HOH HOH . D 4 HOH A 62 1063 163 HOH HOH . D 4 HOH A 63 1064 172 HOH HOH . D 4 HOH A 64 1065 173 HOH HOH . D 4 HOH A 65 1066 174 HOH HOH . D 4 HOH A 66 1067 175 HOH HOH . D 4 HOH A 67 1068 176 HOH HOH . D 4 HOH A 68 1069 186 HOH HOH . D 4 HOH A 69 1070 188 HOH HOH . D 4 HOH A 70 1071 197 HOH HOH . D 4 HOH A 71 1072 203 HOH HOH . D 4 HOH A 72 1073 212 HOH HOH . D 4 HOH A 73 1074 229 HOH HOH . D 4 HOH A 74 1075 242 HOH HOH . D 4 HOH A 75 1076 243 HOH HOH . D 4 HOH A 76 1077 245 HOH HOH . D 4 HOH A 77 1078 247 HOH HOH . D 4 HOH A 78 1079 248 HOH HOH . D 4 HOH A 79 1080 250 HOH HOH . D 4 HOH A 80 1081 251 HOH HOH . D 4 HOH A 81 1082 252 HOH HOH . D 4 HOH A 82 1083 254 HOH HOH . D 4 HOH A 83 1084 256 HOH HOH . D 4 HOH A 84 1085 260 HOH HOH . D 4 HOH A 85 1086 261 HOH HOH . D 4 HOH A 86 1087 262 HOH HOH . D 4 HOH A 87 1088 266 HOH HOH . D 4 HOH A 88 1089 267 HOH HOH . D 4 HOH A 89 1090 268 HOH HOH . D 4 HOH A 90 1091 269 HOH HOH . D 4 HOH A 91 1092 270 HOH HOH . D 4 HOH A 92 1093 271 HOH HOH . D 4 HOH A 93 1094 273 HOH HOH . D 4 HOH A 94 1095 274 HOH HOH . D 4 HOH A 95 1096 275 HOH HOH . D 4 HOH A 96 1097 276 HOH HOH . D 4 HOH A 97 1098 278 HOH HOH . D 4 HOH A 98 1099 279 HOH HOH . D 4 HOH A 99 1100 280 HOH HOH . D 4 HOH A 100 1101 281 HOH HOH . D 4 HOH A 101 1102 282 HOH HOH . D 4 HOH A 102 1103 283 HOH HOH . D 4 HOH A 103 1104 284 HOH HOH . D 4 HOH A 104 1105 286 HOH HOH . D 4 HOH A 105 1106 287 HOH HOH . D 4 HOH A 106 1107 288 HOH HOH . D 4 HOH A 107 1108 291 HOH HOH . D 4 HOH A 108 1109 292 HOH HOH . D 4 HOH A 109 1110 293 HOH HOH . D 4 HOH A 110 1111 294 HOH HOH . D 4 HOH A 111 1112 295 HOH HOH . D 4 HOH A 112 1113 296 HOH HOH . D 4 HOH A 113 1114 297 HOH HOH . D 4 HOH A 114 1115 298 HOH HOH . D 4 HOH A 115 1116 299 HOH HOH . D 4 HOH A 116 1117 300 HOH HOH . D 4 HOH A 117 1118 305 HOH HOH . D 4 HOH A 118 1119 306 HOH HOH . D 4 HOH A 119 1120 308 HOH HOH . D 4 HOH A 120 1121 309 HOH HOH . D 4 HOH A 121 1122 310 HOH HOH . D 4 HOH A 122 1123 311 HOH HOH . D 4 HOH A 123 1124 312 HOH HOH . D 4 HOH A 124 1125 313 HOH HOH . D 4 HOH A 125 1126 314 HOH HOH . D 4 HOH A 126 1127 315 HOH HOH . D 4 HOH A 127 1128 317 HOH HOH . D 4 HOH A 128 1129 319 HOH HOH . D 4 HOH A 129 1130 320 HOH HOH . D 4 HOH A 130 1131 321 HOH HOH . D 4 HOH A 131 1132 322 HOH HOH . D 4 HOH A 132 1133 323 HOH HOH . D 4 HOH A 133 1134 325 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -0.009 _atom_site.Cartn_y 0.002 _atom_site.Cartn_z -0.103 _atom_site.occupancy 0.3 _atom_site.B_iso_or_equiv 52.59 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #