data_2OBP # _model_server_result.job_id MMnYlEvxIFR4Bgcsiff8_Q _model_server_result.datetime_utc '2024-12-26 15:53:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2obp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":96}' # _entry.id 2OBP # _exptl.entry_id 2OBP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2OBP _cell.length_a 76.58 _cell.length_b 76.58 _cell.length_c 137.86 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OBP _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PRO 49 A PRO 48 1_555 A N MSE 50 A MSE 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C MSE 50 A MSE 49 1_555 A N SER 51 A SER 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale3 B C PRO 49 B PRO 48 1_555 B N MSE 50 B MSE 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale4 B C MSE 50 B MSE 49 1_555 B N SER 51 B SER 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 243 n n N O2 NO3 sing 244 n n N O3 NO3 sing 245 n n # _atom_sites.entry_id 2OBP _atom_sites.fract_transf_matrix[1][1] 0.01306 _atom_sites.fract_transf_matrix[1][2] 0.00754 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01508 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00725 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NO3 A 1 96 1 NO3 NO3 . D 3 CL B 1 96 2 CL CL . E 4 HOH A 1 97 7 HOH HOH . E 4 HOH A 2 98 9 HOH HOH . E 4 HOH A 3 99 10 HOH HOH . E 4 HOH A 4 100 12 HOH HOH . E 4 HOH A 5 101 14 HOH HOH . E 4 HOH A 6 102 21 HOH HOH . E 4 HOH A 7 103 26 HOH HOH . E 4 HOH A 8 104 27 HOH HOH . E 4 HOH A 9 105 31 HOH HOH . E 4 HOH A 10 106 32 HOH HOH . E 4 HOH A 11 107 34 HOH HOH . E 4 HOH A 12 108 35 HOH HOH . E 4 HOH A 13 109 36 HOH HOH . E 4 HOH A 14 110 37 HOH HOH . E 4 HOH A 15 111 38 HOH HOH . E 4 HOH A 16 112 40 HOH HOH . E 4 HOH A 17 113 45 HOH HOH . E 4 HOH A 18 114 46 HOH HOH . E 4 HOH A 19 115 48 HOH HOH . E 4 HOH A 20 116 49 HOH HOH . E 4 HOH A 21 117 52 HOH HOH . E 4 HOH A 22 118 58 HOH HOH . E 4 HOH A 23 119 59 HOH HOH . E 4 HOH A 24 120 60 HOH HOH . E 4 HOH A 25 121 61 HOH HOH . E 4 HOH A 26 122 63 HOH HOH . E 4 HOH A 27 123 65 HOH HOH . E 4 HOH A 28 124 67 HOH HOH . E 4 HOH A 29 125 70 HOH HOH . E 4 HOH A 30 126 74 HOH HOH . E 4 HOH A 31 127 75 HOH HOH . E 4 HOH A 32 128 76 HOH HOH . E 4 HOH A 33 129 78 HOH HOH . E 4 HOH A 34 130 79 HOH HOH . E 4 HOH A 35 131 81 HOH HOH . E 4 HOH A 36 132 82 HOH HOH . E 4 HOH A 37 133 83 HOH HOH . E 4 HOH A 38 134 87 HOH HOH . E 4 HOH A 39 135 88 HOH HOH . E 4 HOH A 40 136 89 HOH HOH . E 4 HOH A 41 137 92 HOH HOH . E 4 HOH A 42 138 94 HOH HOH . E 4 HOH A 43 139 95 HOH HOH . E 4 HOH A 44 140 96 HOH HOH . E 4 HOH A 45 141 97 HOH HOH . E 4 HOH A 46 142 99 HOH HOH . E 4 HOH A 47 143 102 HOH HOH . E 4 HOH A 48 144 103 HOH HOH . E 4 HOH A 49 145 105 HOH HOH . E 4 HOH A 50 146 106 HOH HOH . E 4 HOH A 51 147 107 HOH HOH . E 4 HOH A 52 148 109 HOH HOH . E 4 HOH A 53 149 110 HOH HOH . E 4 HOH A 54 150 113 HOH HOH . E 4 HOH A 55 151 116 HOH HOH . E 4 HOH A 56 152 121 HOH HOH . E 4 HOH A 57 153 122 HOH HOH . E 4 HOH A 58 154 124 HOH HOH . E 4 HOH A 59 155 125 HOH HOH . E 4 HOH A 60 156 126 HOH HOH . E 4 HOH A 61 157 127 HOH HOH . E 4 HOH A 62 158 128 HOH HOH . E 4 HOH A 63 159 130 HOH HOH . E 4 HOH A 64 160 140 HOH HOH . E 4 HOH A 65 161 142 HOH HOH . E 4 HOH A 66 162 143 HOH HOH . E 4 HOH A 67 163 145 HOH HOH . E 4 HOH A 68 164 146 HOH HOH . E 4 HOH A 69 165 147 HOH HOH . E 4 HOH A 70 166 148 HOH HOH . E 4 HOH A 71 167 149 HOH HOH . E 4 HOH A 72 168 150 HOH HOH . E 4 HOH A 73 169 151 HOH HOH . E 4 HOH A 74 170 152 HOH HOH . E 4 HOH A 75 171 153 HOH HOH . E 4 HOH A 76 172 156 HOH HOH . E 4 HOH A 77 173 157 HOH HOH . E 4 HOH A 78 174 159 HOH HOH . E 4 HOH A 79 175 160 HOH HOH . E 4 HOH A 80 176 162 HOH HOH . E 4 HOH A 81 177 164 HOH HOH . E 4 HOH A 82 178 166 HOH HOH . E 4 HOH A 83 179 167 HOH HOH . E 4 HOH A 84 180 168 HOH HOH . F 4 HOH B 1 97 3 HOH HOH . F 4 HOH B 2 98 4 HOH HOH . F 4 HOH B 3 99 5 HOH HOH . F 4 HOH B 4 100 6 HOH HOH . F 4 HOH B 5 101 8 HOH HOH . F 4 HOH B 6 102 11 HOH HOH . F 4 HOH B 7 103 13 HOH HOH . F 4 HOH B 8 104 15 HOH HOH . F 4 HOH B 9 105 16 HOH HOH . F 4 HOH B 10 106 17 HOH HOH . F 4 HOH B 11 107 18 HOH HOH . F 4 HOH B 12 108 19 HOH HOH . F 4 HOH B 13 109 20 HOH HOH . F 4 HOH B 14 110 22 HOH HOH . F 4 HOH B 15 111 23 HOH HOH . F 4 HOH B 16 112 24 HOH HOH . F 4 HOH B 17 113 25 HOH HOH . F 4 HOH B 18 114 28 HOH HOH . F 4 HOH B 19 115 29 HOH HOH . F 4 HOH B 20 116 30 HOH HOH . F 4 HOH B 21 117 33 HOH HOH . F 4 HOH B 22 118 39 HOH HOH . F 4 HOH B 23 119 41 HOH HOH . F 4 HOH B 24 120 42 HOH HOH . F 4 HOH B 25 121 43 HOH HOH . F 4 HOH B 26 122 44 HOH HOH . F 4 HOH B 27 123 47 HOH HOH . F 4 HOH B 28 124 50 HOH HOH . F 4 HOH B 29 125 51 HOH HOH . F 4 HOH B 30 126 53 HOH HOH . F 4 HOH B 31 127 54 HOH HOH . F 4 HOH B 32 128 55 HOH HOH . F 4 HOH B 33 129 56 HOH HOH . F 4 HOH B 34 130 57 HOH HOH . F 4 HOH B 35 131 62 HOH HOH . F 4 HOH B 36 132 64 HOH HOH . F 4 HOH B 37 133 66 HOH HOH . F 4 HOH B 38 134 68 HOH HOH . F 4 HOH B 39 135 69 HOH HOH . F 4 HOH B 40 136 71 HOH HOH . F 4 HOH B 41 137 72 HOH HOH . F 4 HOH B 42 138 73 HOH HOH . F 4 HOH B 43 139 77 HOH HOH . F 4 HOH B 44 140 80 HOH HOH . F 4 HOH B 45 141 84 HOH HOH . F 4 HOH B 46 142 85 HOH HOH . F 4 HOH B 47 143 86 HOH HOH . F 4 HOH B 48 144 90 HOH HOH . F 4 HOH B 49 145 91 HOH HOH . F 4 HOH B 50 146 93 HOH HOH . F 4 HOH B 51 147 98 HOH HOH . F 4 HOH B 52 148 100 HOH HOH . F 4 HOH B 53 149 101 HOH HOH . F 4 HOH B 54 150 104 HOH HOH . F 4 HOH B 55 151 108 HOH HOH . F 4 HOH B 56 152 111 HOH HOH . F 4 HOH B 57 153 112 HOH HOH . F 4 HOH B 58 154 114 HOH HOH . F 4 HOH B 59 155 115 HOH HOH . F 4 HOH B 60 156 117 HOH HOH . F 4 HOH B 61 157 118 HOH HOH . F 4 HOH B 62 158 119 HOH HOH . F 4 HOH B 63 159 120 HOH HOH . F 4 HOH B 64 160 123 HOH HOH . F 4 HOH B 65 161 129 HOH HOH . F 4 HOH B 66 162 131 HOH HOH . F 4 HOH B 67 163 132 HOH HOH . F 4 HOH B 68 164 133 HOH HOH . F 4 HOH B 69 165 134 HOH HOH . F 4 HOH B 70 166 135 HOH HOH . F 4 HOH B 71 167 136 HOH HOH . F 4 HOH B 72 168 137 HOH HOH . F 4 HOH B 73 169 138 HOH HOH . F 4 HOH B 74 170 139 HOH HOH . F 4 HOH B 75 171 141 HOH HOH . F 4 HOH B 76 172 144 HOH HOH . F 4 HOH B 77 173 154 HOH HOH . F 4 HOH B 78 174 155 HOH HOH . F 4 HOH B 79 175 158 HOH HOH . F 4 HOH B 80 176 161 HOH HOH . F 4 HOH B 81 177 163 HOH HOH . F 4 HOH B 82 178 165 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . C 2 38.01 46.918 24.26 1 45.61 ? N NO3 96 A 1 HETATM 2 O O1 NO3 . . . C 2 38.174 45.6 23.897 1 39.8 ? O1 NO3 96 A 1 HETATM 3 O O2 NO3 . . . C 2 37.816 47.232 25.602 1 47.22 ? O2 NO3 96 A 1 HETATM 4 O O3 NO3 . . . C 2 38.056 47.911 23.242 1 47.68 ? O3 NO3 96 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 4 #