data_2OFR # _model_server_result.job_id M5Odg3EhnCaAReVc5T9Zvw _model_server_result.datetime_utc '2024-11-18 09:53:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ofr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":186}' # _entry.id 2OFR # _exptl.entry_id 2OFR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 30.006 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRIC OXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.12 _cell.angle_gamma 90 _cell.entry_id 2OFR _cell.length_a 70.191 _cell.length_b 42.637 _cell.length_c 52.975 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OFR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 X CYS 2 1_555 A SG CYS 122 X CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 41 X CYS 41 1_555 A SG CYS 171 X CYS 171 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 41 X CYS 41 1_555 A SG CYS 171 X CYS 171 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.016 ? metalc ? metalc1 A NE2 HIS 59 X HIS 59 1_555 C FE HEM . X HEM 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc2 C FE HEM . X HEM 185 1_555 D N NO . X NO 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.748 ? # _chem_comp.formula 'N O' _chem_comp.formula_weight 30.006 _chem_comp.id NO _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRIC OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Nitrogen monoxide' # _chem_comp_bond.atom_id_1 N _chem_comp_bond.atom_id_2 O _chem_comp_bond.comp_id NO _chem_comp_bond.value_order doub _chem_comp_bond.pdbx_ordinal 319 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 2OFR _atom_sites.fract_transf_matrix[1][1] 0.014247 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001026 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023454 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018926 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 X 1 187 187 PO4 PO4 . C 3 HEM X 1 185 185 HEM HEM . D 4 NO X 1 186 186 NO NMO . E 5 HOH X 1 188 201 HOH HOH . E 5 HOH X 2 189 202 HOH HOH . E 5 HOH X 3 190 203 HOH HOH . E 5 HOH X 4 191 204 HOH HOH . E 5 HOH X 5 192 205 HOH HOH . E 5 HOH X 6 193 206 HOH HOH . E 5 HOH X 7 194 207 HOH HOH . E 5 HOH X 8 195 208 HOH HOH . E 5 HOH X 9 196 209 HOH HOH . E 5 HOH X 10 197 210 HOH HOH . E 5 HOH X 11 198 211 HOH HOH . E 5 HOH X 12 199 212 HOH HOH . E 5 HOH X 13 200 213 HOH HOH . E 5 HOH X 14 201 214 HOH HOH . E 5 HOH X 15 202 215 HOH HOH . E 5 HOH X 16 203 216 HOH HOH . E 5 HOH X 17 204 217 HOH HOH . E 5 HOH X 18 205 218 HOH HOH . E 5 HOH X 19 206 219 HOH HOH . E 5 HOH X 20 207 220 HOH HOH . E 5 HOH X 21 208 221 HOH HOH . E 5 HOH X 22 209 222 HOH HOH . E 5 HOH X 23 210 224 HOH HOH . E 5 HOH X 24 211 225 HOH HOH . E 5 HOH X 25 212 226 HOH HOH . E 5 HOH X 26 213 227 HOH HOH . E 5 HOH X 27 214 228 HOH HOH . E 5 HOH X 28 215 229 HOH HOH . E 5 HOH X 29 216 230 HOH HOH . E 5 HOH X 30 217 231 HOH HOH . E 5 HOH X 31 218 232 HOH HOH . E 5 HOH X 32 219 233 HOH HOH . E 5 HOH X 33 220 234 HOH HOH . E 5 HOH X 34 221 235 HOH HOH . E 5 HOH X 35 222 236 HOH HOH . E 5 HOH X 36 223 237 HOH HOH . E 5 HOH X 37 224 238 HOH HOH . E 5 HOH X 38 225 239 HOH HOH . E 5 HOH X 39 226 240 HOH HOH . E 5 HOH X 40 227 241 HOH HOH . E 5 HOH X 41 228 242 HOH HOH . E 5 HOH X 42 229 243 HOH HOH . E 5 HOH X 43 230 244 HOH HOH . E 5 HOH X 44 231 245 HOH HOH . E 5 HOH X 45 232 248 HOH HOH . E 5 HOH X 46 233 249 HOH HOH . E 5 HOH X 47 234 250 HOH HOH . E 5 HOH X 48 235 252 HOH HOH . E 5 HOH X 49 236 253 HOH HOH . E 5 HOH X 50 237 254 HOH HOH . E 5 HOH X 51 238 255 HOH HOH . E 5 HOH X 52 239 256 HOH HOH . E 5 HOH X 53 240 259 HOH HOH . E 5 HOH X 54 241 260 HOH HOH . E 5 HOH X 55 242 261 HOH HOH . E 5 HOH X 56 243 262 HOH HOH . E 5 HOH X 57 244 263 HOH HOH . E 5 HOH X 58 245 264 HOH HOH . E 5 HOH X 59 246 266 HOH HOH . E 5 HOH X 60 247 267 HOH HOH . E 5 HOH X 61 248 268 HOH HOH . E 5 HOH X 62 249 269 HOH HOH . E 5 HOH X 63 250 270 HOH HOH . E 5 HOH X 64 251 271 HOH HOH . E 5 HOH X 65 252 272 HOH HOH . E 5 HOH X 66 253 273 HOH HOH . E 5 HOH X 67 254 274 HOH HOH . E 5 HOH X 68 255 283 HOH HOH . E 5 HOH X 69 256 284 HOH HOH . E 5 HOH X 70 257 285 HOH HOH . E 5 HOH X 71 258 288 HOH HOH . E 5 HOH X 72 259 289 HOH HOH . E 5 HOH X 73 260 290 HOH HOH . E 5 HOH X 74 261 291 HOH HOH . E 5 HOH X 75 262 292 HOH HOH . E 5 HOH X 76 263 293 HOH HOH . E 5 HOH X 77 264 295 HOH HOH . E 5 HOH X 78 265 305 HOH HOH . E 5 HOH X 79 266 306 HOH HOH . E 5 HOH X 80 267 307 HOH HOH . E 5 HOH X 81 268 311 HOH HOH . E 5 HOH X 82 269 314 HOH HOH . E 5 HOH X 83 270 318 HOH HOH . E 5 HOH X 84 271 319 HOH HOH . E 5 HOH X 85 272 328 HOH HOH . E 5 HOH X 86 273 331 HOH HOH . E 5 HOH X 87 274 332 HOH HOH . E 5 HOH X 88 275 333 HOH HOH . E 5 HOH X 89 276 335 HOH HOH . E 5 HOH X 90 277 336 HOH HOH . E 5 HOH X 91 278 337 HOH HOH . E 5 HOH X 92 279 338 HOH HOH . E 5 HOH X 93 280 339 HOH HOH . E 5 HOH X 94 281 340 HOH HOH . E 5 HOH X 95 282 341 HOH HOH . E 5 HOH X 96 283 343 HOH HOH . E 5 HOH X 97 284 345 HOH HOH . E 5 HOH X 98 285 346 HOH HOH . E 5 HOH X 99 286 347 HOH HOH . E 5 HOH X 100 287 351 HOH HOH . E 5 HOH X 101 288 352 HOH HOH . E 5 HOH X 102 289 354 HOH HOH . E 5 HOH X 103 290 355 HOH HOH . E 5 HOH X 104 291 356 HOH HOH . E 5 HOH X 105 292 360 HOH HOH . E 5 HOH X 106 293 363 HOH HOH . E 5 HOH X 107 294 366 HOH HOH . E 5 HOH X 108 295 368 HOH HOH . E 5 HOH X 109 296 373 HOH HOH . E 5 HOH X 110 297 377 HOH HOH . E 5 HOH X 111 298 378 HOH HOH . E 5 HOH X 112 299 383 HOH HOH . E 5 HOH X 113 300 386 HOH HOH . E 5 HOH X 114 301 387 HOH HOH . E 5 HOH X 115 302 392 HOH HOH . E 5 HOH X 116 303 399 HOH HOH . E 5 HOH X 117 304 405 HOH HOH . E 5 HOH X 118 305 408 HOH HOH . E 5 HOH X 119 306 413 HOH HOH . E 5 HOH X 120 307 416 HOH HOH . E 5 HOH X 121 308 417 HOH HOH . E 5 HOH X 122 309 424 HOH HOH . E 5 HOH X 123 310 426 HOH HOH . E 5 HOH X 124 311 430 HOH HOH . E 5 HOH X 125 312 436 HOH HOH . E 5 HOH X 126 313 437 HOH HOH . E 5 HOH X 127 314 439 HOH HOH . E 5 HOH X 128 315 442 HOH HOH . E 5 HOH X 129 316 444 HOH HOH . E 5 HOH X 130 317 454 HOH HOH . E 5 HOH X 131 318 455 HOH HOH . E 5 HOH X 132 319 457 HOH HOH . E 5 HOH X 133 320 469 HOH HOH . E 5 HOH X 134 321 477 HOH HOH . E 5 HOH X 135 322 489 HOH HOH . E 5 HOH X 136 323 539 HOH HOH . E 5 HOH X 137 324 540 HOH HOH . E 5 HOH X 138 325 542 HOH HOH . E 5 HOH X 139 326 544 HOH HOH . E 5 HOH X 140 327 1 HOH HOH . E 5 HOH X 141 328 2 HOH HOH . E 5 HOH X 142 329 3 HOH HOH . E 5 HOH X 143 330 4 HOH HOH . E 5 HOH X 144 331 5 HOH HOH . E 5 HOH X 145 332 6 HOH HOH . E 5 HOH X 146 333 7 HOH HOH . E 5 HOH X 147 334 8 HOH HOH . E 5 HOH X 148 335 9 HOH HOH . E 5 HOH X 149 336 10 HOH HOH . E 5 HOH X 150 337 11 HOH HOH . E 5 HOH X 151 338 12 HOH HOH . E 5 HOH X 152 339 13 HOH HOH . E 5 HOH X 153 340 14 HOH HOH . E 5 HOH X 154 341 15 HOH HOH . E 5 HOH X 155 342 16 HOH HOH . E 5 HOH X 156 343 17 HOH HOH . E 5 HOH X 157 344 18 HOH HOH . E 5 HOH X 158 345 19 HOH HOH . E 5 HOH X 159 346 20 HOH HOH . E 5 HOH X 160 347 21 HOH HOH . E 5 HOH X 161 348 22 HOH HOH . E 5 HOH X 162 349 23 HOH HOH . E 5 HOH X 163 350 24 HOH HOH . E 5 HOH X 164 351 25 HOH HOH . E 5 HOH X 165 352 26 HOH HOH . E 5 HOH X 166 353 27 HOH HOH . E 5 HOH X 167 354 28 HOH HOH . E 5 HOH X 168 355 29 HOH HOH . E 5 HOH X 169 356 30 HOH HOH . E 5 HOH X 170 357 31 HOH HOH . E 5 HOH X 171 358 32 HOH HOH . E 5 HOH X 172 359 33 HOH HOH . E 5 HOH X 173 360 34 HOH HOH . E 5 HOH X 174 361 35 HOH HOH . E 5 HOH X 175 362 36 HOH HOH . E 5 HOH X 176 363 37 HOH HOH . E 5 HOH X 177 364 38 HOH HOH . E 5 HOH X 178 365 39 HOH HOH . E 5 HOH X 179 366 40 HOH HOH . E 5 HOH X 180 367 41 HOH HOH . E 5 HOH X 181 368 42 HOH HOH . E 5 HOH X 182 369 43 HOH HOH . E 5 HOH X 183 370 44 HOH HOH . E 5 HOH X 184 371 45 HOH HOH . E 5 HOH X 185 372 46 HOH HOH . E 5 HOH X 186 373 47 HOH HOH . E 5 HOH X 187 374 48 HOH HOH . E 5 HOH X 188 375 49 HOH HOH . E 5 HOH X 189 376 50 HOH HOH . E 5 HOH X 190 377 51 HOH HOH . E 5 HOH X 191 378 52 HOH HOH . E 5 HOH X 192 379 53 HOH HOH . E 5 HOH X 193 380 54 HOH HOH . E 5 HOH X 194 381 55 HOH HOH . E 5 HOH X 195 382 56 HOH HOH . E 5 HOH X 196 383 57 HOH HOH . E 5 HOH X 197 384 58 HOH HOH . E 5 HOH X 198 385 59 HOH HOH . E 5 HOH X 199 386 60 HOH HOH . E 5 HOH X 200 387 61 HOH HOH . E 5 HOH X 201 388 62 HOH HOH . E 5 HOH X 202 389 63 HOH HOH . E 5 HOH X 203 390 64 HOH HOH . E 5 HOH X 204 391 65 HOH HOH . E 5 HOH X 205 392 66 HOH HOH . E 5 HOH X 206 393 67 HOH HOH . E 5 HOH X 207 394 68 HOH HOH . E 5 HOH X 208 395 69 HOH HOH . E 5 HOH X 209 396 70 HOH HOH . E 5 HOH X 210 397 71 HOH HOH . E 5 HOH X 211 398 72 HOH HOH . E 5 HOH X 212 399 73 HOH HOH . E 5 HOH X 213 400 74 HOH HOH . E 5 HOH X 214 401 75 HOH HOH . E 5 HOH X 215 402 76 HOH HOH . E 5 HOH X 216 403 77 HOH HOH . E 5 HOH X 217 404 78 HOH HOH . E 5 HOH X 218 405 79 HOH HOH . E 5 HOH X 219 406 80 HOH HOH . E 5 HOH X 220 407 81 HOH HOH . E 5 HOH X 221 408 82 HOH HOH . E 5 HOH X 222 409 83 HOH HOH . E 5 HOH X 223 410 84 HOH HOH . E 5 HOH X 224 411 85 HOH HOH . E 5 HOH X 225 412 86 HOH HOH . E 5 HOH X 226 413 87 HOH HOH . E 5 HOH X 227 414 88 HOH HOH . E 5 HOH X 228 415 89 HOH HOH . E 5 HOH X 229 416 90 HOH HOH . E 5 HOH X 230 417 91 HOH HOH . E 5 HOH X 231 418 92 HOH HOH . E 5 HOH X 232 419 93 HOH HOH . E 5 HOH X 233 420 94 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO . . . D 4 10.889 19.141 35.011 1 7.31 ? N NO 186 X 1 HETATM 2 O O NO . . . D 4 9.963 18.625 34.236 1 15.24 ? O NO 186 X 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 667 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 2 #