data_2OGI # _model_server_result.job_id hby8-SX0b29MYhIw5wuw9Q _model_server_result.datetime_utc '2024-12-21 17:13:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ogi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":400}' # _entry.id 2OGI # _exptl.entry_id 2OGI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.29 _cell.angle_gamma 90 _cell.entry_id 2OGI _cell.length_a 65.841 _cell.length_b 52.535 _cell.length_c 70.022 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OGI _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 21 A HIS 20 1_555 A N MSE 22 A MSE 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale2 A C MSE 22 A MSE 21 1_555 A N MSE 23 A MSE 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale3 A C MSE 23 A MSE 22 1_555 A N SER 24 A SER 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale4 A C GLN 124 A GLN 123 1_555 A N MSE 125 A MSE 124 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 A C GLN 124 A GLN 123 1_555 A N MSE 125 A MSE 124 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale6 A C MSE 125 A MSE 124 1_555 A N SER 126 A SER 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 B C MSE 2 B MSE 1 1_555 B N THR 3 B THR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale8 B C HIS 21 B HIS 20 1_555 B N MSE 22 B MSE 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale9 B C MSE 22 B MSE 21 1_555 B N MSE 23 B MSE 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale10 B C MSE 23 B MSE 22 1_555 B N SER 24 B SER 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale11 B C GLN 124 B GLN 123 1_555 B N MSE 125 B MSE 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale12 B C MSE 125 B MSE 124 1_555 B N SER 126 B SER 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? metalc ? metalc1 A NE2 HIS 30 A HIS 29 1_555 C FE FE . A FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc2 A NE2 HIS 59 A HIS 58 1_555 C FE FE . A FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc3 A OD2 ASP 60 A ASP 59 1_555 C FE FE . A FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc4 A OD1 ASP 60 A ASP 59 1_555 D FE FE . A FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc5 A NE2 HIS 92 A HIS 91 1_555 D FE FE . A FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc6 A NE2 HIS 118 A HIS 117 1_555 D FE FE . A FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc7 A OD1 ASP 136 A ASP 135 1_555 C FE FE . A FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc8 C FE FE . A FE 301 1_555 H O3B GDP . A GDP 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc9 C FE FE . A FE 301 1_555 M O HOH . A HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? metalc ? metalc10 D FE FE . A FE 302 1_555 H O1A GDP . A GDP 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc11 D FE FE . A FE 302 1_555 H O2B GDP . A GDP 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc12 D FE FE . A FE 302 1_555 M O HOH . A HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc13 B NE2 HIS 30 B HIS 29 1_555 I FE FE . B FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc14 B NE2 HIS 59 B HIS 58 1_555 I FE FE . B FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc15 B OD2 ASP 60 B ASP 59 1_555 I FE FE . B FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc16 B OD1 ASP 60 B ASP 59 1_555 J FE FE . B FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc17 B NE2 HIS 92 B HIS 91 1_555 J FE FE . B FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc18 B NE2 HIS 118 B HIS 117 1_555 J FE FE . B FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc19 B OD1 ASP 136 B ASP 135 1_555 I FE FE . B FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc20 I FE FE . B FE 301 1_555 K O3B GDP . B GDP 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc21 I FE FE . B FE 301 1_555 N O HOH . B HOH 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? metalc ? metalc22 J FE FE . B FE 302 1_555 K O1A GDP . B GDP 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc23 J FE FE . B FE 302 1_555 K O2B GDP . B GDP 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc24 J FE FE . B FE 302 1_555 N O HOH . B HOH 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 70 n n PB O2B GDP sing 71 n n PB O3B GDP sing 72 n n PB O3A GDP sing 73 n n O2B HOB2 GDP sing 74 n n O3B HOB3 GDP sing 75 n n O3A PA GDP sing 76 n n PA O1A GDP doub 77 n n PA O2A GDP sing 78 n n PA O5' GDP sing 79 n n O2A HOA2 GDP sing 80 n n O5' C5' GDP sing 81 n n C5' C4' GDP sing 82 n n C5' H5' GDP sing 83 n n C5' "H5''" GDP sing 84 n n C4' O4' GDP sing 85 n n C4' C3' GDP sing 86 n n C4' H4' GDP sing 87 n n O4' C1' GDP sing 88 n n C3' O3' GDP sing 89 n n C3' C2' GDP sing 90 n n C3' H3' GDP sing 91 n n O3' HO3' GDP sing 92 n n C2' O2' GDP sing 93 n n C2' C1' GDP sing 94 n n C2' H2' GDP sing 95 n n O2' HO2' GDP sing 96 n n C1' N9 GDP sing 97 n n C1' H1' GDP sing 98 n n N9 C8 GDP sing 99 n y N9 C4 GDP sing 100 n y C8 N7 GDP doub 101 n y C8 H8 GDP sing 102 n n N7 C5 GDP sing 103 n y C5 C6 GDP sing 104 n n C5 C4 GDP doub 105 n y C6 O6 GDP doub 106 n n C6 N1 GDP sing 107 n n N1 C2 GDP sing 108 n n N1 HN1 GDP sing 109 n n C2 N2 GDP sing 110 n n C2 N3 GDP doub 111 n n N2 HN21 GDP sing 112 n n N2 HN22 GDP sing 113 n n N3 C4 GDP sing 114 n n # _atom_sites.entry_id 2OGI _atom_sites.fract_transf_matrix[1][1] 0.01519 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00685 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01904 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01567 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FE A 1 301 301 FE FE . D 2 FE A 1 302 302 FE FE . E 3 CL A 1 303 1 CL CL . F 3 CL A 1 304 2 CL CL . G 3 CL A 1 305 3 CL CL . H 4 GDP A 1 400 400 GDP GDP . I 2 FE B 1 301 301 FE FE . J 2 FE B 1 302 302 FE FE . K 4 GDP B 1 400 400 GDP GDP . L 5 MES B 1 401 4 MES MES . M 6 HOH A 1 401 6 HOH HOH . M 6 HOH A 2 402 7 HOH HOH . M 6 HOH A 3 403 12 HOH HOH . M 6 HOH A 4 404 13 HOH HOH . M 6 HOH A 5 405 15 HOH HOH . M 6 HOH A 6 406 16 HOH HOH . M 6 HOH A 7 407 17 HOH HOH . M 6 HOH A 8 408 19 HOH HOH . M 6 HOH A 9 409 30 HOH HOH . M 6 HOH A 10 410 32 HOH HOH . M 6 HOH A 11 411 33 HOH HOH . M 6 HOH A 12 412 40 HOH HOH . M 6 HOH A 13 413 42 HOH HOH . M 6 HOH A 14 414 48 HOH HOH . M 6 HOH A 15 415 52 HOH HOH . M 6 HOH A 16 416 55 HOH HOH . M 6 HOH A 17 417 57 HOH HOH . M 6 HOH A 18 418 59 HOH HOH . M 6 HOH A 19 419 66 HOH HOH . M 6 HOH A 20 420 69 HOH HOH . M 6 HOH A 21 421 70 HOH HOH . M 6 HOH A 22 422 71 HOH HOH . M 6 HOH A 23 423 73 HOH HOH . M 6 HOH A 24 424 74 HOH HOH . M 6 HOH A 25 425 77 HOH HOH . M 6 HOH A 26 426 78 HOH HOH . M 6 HOH A 27 427 80 HOH HOH . M 6 HOH A 28 428 82 HOH HOH . M 6 HOH A 29 429 83 HOH HOH . M 6 HOH A 30 430 88 HOH HOH . M 6 HOH A 31 431 90 HOH HOH . M 6 HOH A 32 432 91 HOH HOH . M 6 HOH A 33 433 92 HOH HOH . M 6 HOH A 34 434 100 HOH HOH . M 6 HOH A 35 435 101 HOH HOH . M 6 HOH A 36 436 102 HOH HOH . M 6 HOH A 37 437 104 HOH HOH . M 6 HOH A 38 438 105 HOH HOH . M 6 HOH A 39 439 106 HOH HOH . M 6 HOH A 40 440 107 HOH HOH . M 6 HOH A 41 441 108 HOH HOH . M 6 HOH A 42 442 112 HOH HOH . M 6 HOH A 43 443 114 HOH HOH . M 6 HOH A 44 444 116 HOH HOH . M 6 HOH A 45 445 117 HOH HOH . M 6 HOH A 46 446 119 HOH HOH . M 6 HOH A 47 447 121 HOH HOH . M 6 HOH A 48 448 124 HOH HOH . M 6 HOH A 49 449 127 HOH HOH . M 6 HOH A 50 450 129 HOH HOH . M 6 HOH A 51 451 131 HOH HOH . M 6 HOH A 52 452 133 HOH HOH . M 6 HOH A 53 453 134 HOH HOH . M 6 HOH A 54 454 136 HOH HOH . M 6 HOH A 55 455 137 HOH HOH . M 6 HOH A 56 456 139 HOH HOH . M 6 HOH A 57 457 141 HOH HOH . M 6 HOH A 58 458 143 HOH HOH . M 6 HOH A 59 459 146 HOH HOH . M 6 HOH A 60 460 148 HOH HOH . M 6 HOH A 61 461 149 HOH HOH . M 6 HOH A 62 462 156 HOH HOH . M 6 HOH A 63 463 157 HOH HOH . M 6 HOH A 64 464 158 HOH HOH . M 6 HOH A 65 465 161 HOH HOH . M 6 HOH A 66 466 162 HOH HOH . M 6 HOH A 67 467 163 HOH HOH . M 6 HOH A 68 468 167 HOH HOH . M 6 HOH A 69 469 170 HOH HOH . M 6 HOH A 70 470 171 HOH HOH . M 6 HOH A 71 471 172 HOH HOH . M 6 HOH A 72 472 175 HOH HOH . M 6 HOH A 73 473 176 HOH HOH . M 6 HOH A 74 474 177 HOH HOH . M 6 HOH A 75 475 179 HOH HOH . M 6 HOH A 76 476 183 HOH HOH . M 6 HOH A 77 477 184 HOH HOH . M 6 HOH A 78 478 186 HOH HOH . M 6 HOH A 79 479 188 HOH HOH . M 6 HOH A 80 480 190 HOH HOH . M 6 HOH A 81 481 191 HOH HOH . M 6 HOH A 82 482 193 HOH HOH . M 6 HOH A 83 483 197 HOH HOH . M 6 HOH A 84 484 202 HOH HOH . M 6 HOH A 85 485 205 HOH HOH . M 6 HOH A 86 486 207 HOH HOH . M 6 HOH A 87 487 211 HOH HOH . M 6 HOH A 88 488 213 HOH HOH . M 6 HOH A 89 489 214 HOH HOH . M 6 HOH A 90 490 215 HOH HOH . M 6 HOH A 91 491 216 HOH HOH . M 6 HOH A 92 492 218 HOH HOH . M 6 HOH A 93 493 220 HOH HOH . M 6 HOH A 94 494 221 HOH HOH . M 6 HOH A 95 495 222 HOH HOH . M 6 HOH A 96 496 223 HOH HOH . M 6 HOH A 97 497 225 HOH HOH . M 6 HOH A 98 498 227 HOH HOH . M 6 HOH A 99 499 228 HOH HOH . M 6 HOH A 100 500 229 HOH HOH . M 6 HOH A 101 501 230 HOH HOH . M 6 HOH A 102 502 231 HOH HOH . M 6 HOH A 103 503 233 HOH HOH . M 6 HOH A 104 504 236 HOH HOH . M 6 HOH A 105 505 237 HOH HOH . M 6 HOH A 106 506 238 HOH HOH . M 6 HOH A 107 507 240 HOH HOH . M 6 HOH A 108 508 242 HOH HOH . M 6 HOH A 109 509 244 HOH HOH . M 6 HOH A 110 510 247 HOH HOH . M 6 HOH A 111 511 250 HOH HOH . M 6 HOH A 112 512 251 HOH HOH . M 6 HOH A 113 513 252 HOH HOH . M 6 HOH A 114 514 253 HOH HOH . M 6 HOH A 115 515 254 HOH HOH . M 6 HOH A 116 516 256 HOH HOH . M 6 HOH A 117 517 257 HOH HOH . M 6 HOH A 118 518 258 HOH HOH . M 6 HOH A 119 519 263 HOH HOH . M 6 HOH A 120 520 264 HOH HOH . M 6 HOH A 121 521 266 HOH HOH . M 6 HOH A 122 522 268 HOH HOH . M 6 HOH A 123 523 271 HOH HOH . M 6 HOH A 124 524 273 HOH HOH . M 6 HOH A 125 525 274 HOH HOH . M 6 HOH A 126 526 275 HOH HOH . M 6 HOH A 127 527 276 HOH HOH . N 6 HOH B 1 402 5 HOH HOH . N 6 HOH B 2 403 8 HOH HOH . N 6 HOH B 3 404 9 HOH HOH . N 6 HOH B 4 405 10 HOH HOH . N 6 HOH B 5 406 11 HOH HOH . N 6 HOH B 6 407 14 HOH HOH . N 6 HOH B 7 408 18 HOH HOH . N 6 HOH B 8 409 20 HOH HOH . N 6 HOH B 9 410 21 HOH HOH . N 6 HOH B 10 411 22 HOH HOH . N 6 HOH B 11 412 23 HOH HOH . N 6 HOH B 12 413 24 HOH HOH . N 6 HOH B 13 414 25 HOH HOH . N 6 HOH B 14 415 26 HOH HOH . N 6 HOH B 15 416 27 HOH HOH . N 6 HOH B 16 417 28 HOH HOH . N 6 HOH B 17 418 29 HOH HOH . N 6 HOH B 18 419 31 HOH HOH . N 6 HOH B 19 420 34 HOH HOH . N 6 HOH B 20 421 35 HOH HOH . N 6 HOH B 21 422 36 HOH HOH . N 6 HOH B 22 423 37 HOH HOH . N 6 HOH B 23 424 38 HOH HOH . N 6 HOH B 24 425 39 HOH HOH . N 6 HOH B 25 426 41 HOH HOH . N 6 HOH B 26 427 43 HOH HOH . N 6 HOH B 27 428 44 HOH HOH . N 6 HOH B 28 429 45 HOH HOH . N 6 HOH B 29 430 46 HOH HOH . N 6 HOH B 30 431 47 HOH HOH . N 6 HOH B 31 432 49 HOH HOH . N 6 HOH B 32 433 50 HOH HOH . N 6 HOH B 33 434 51 HOH HOH . N 6 HOH B 34 435 53 HOH HOH . N 6 HOH B 35 436 54 HOH HOH . N 6 HOH B 36 437 56 HOH HOH . N 6 HOH B 37 438 58 HOH HOH . N 6 HOH B 38 439 60 HOH HOH . N 6 HOH B 39 440 61 HOH HOH . N 6 HOH B 40 441 62 HOH HOH . N 6 HOH B 41 442 63 HOH HOH . N 6 HOH B 42 443 64 HOH HOH . N 6 HOH B 43 444 65 HOH HOH . N 6 HOH B 44 445 67 HOH HOH . N 6 HOH B 45 446 68 HOH HOH . N 6 HOH B 46 447 72 HOH HOH . N 6 HOH B 47 448 75 HOH HOH . N 6 HOH B 48 449 76 HOH HOH . N 6 HOH B 49 450 79 HOH HOH . N 6 HOH B 50 451 81 HOH HOH . N 6 HOH B 51 452 84 HOH HOH . N 6 HOH B 52 453 85 HOH HOH . N 6 HOH B 53 454 86 HOH HOH . N 6 HOH B 54 455 87 HOH HOH . N 6 HOH B 55 456 89 HOH HOH . N 6 HOH B 56 457 93 HOH HOH . N 6 HOH B 57 458 94 HOH HOH . N 6 HOH B 58 459 95 HOH HOH . N 6 HOH B 59 460 96 HOH HOH . N 6 HOH B 60 461 97 HOH HOH . N 6 HOH B 61 462 98 HOH HOH . N 6 HOH B 62 463 99 HOH HOH . N 6 HOH B 63 464 103 HOH HOH . N 6 HOH B 64 465 109 HOH HOH . N 6 HOH B 65 466 110 HOH HOH . N 6 HOH B 66 467 111 HOH HOH . N 6 HOH B 67 468 113 HOH HOH . N 6 HOH B 68 469 115 HOH HOH . N 6 HOH B 69 470 118 HOH HOH . N 6 HOH B 70 471 120 HOH HOH . N 6 HOH B 71 472 122 HOH HOH . N 6 HOH B 72 473 123 HOH HOH . N 6 HOH B 73 474 125 HOH HOH . N 6 HOH B 74 475 126 HOH HOH . N 6 HOH B 75 476 128 HOH HOH . N 6 HOH B 76 477 130 HOH HOH . N 6 HOH B 77 478 132 HOH HOH . N 6 HOH B 78 479 135 HOH HOH . N 6 HOH B 79 480 138 HOH HOH . N 6 HOH B 80 481 140 HOH HOH . N 6 HOH B 81 482 142 HOH HOH . N 6 HOH B 82 483 144 HOH HOH . N 6 HOH B 83 484 145 HOH HOH . N 6 HOH B 84 485 147 HOH HOH . N 6 HOH B 85 486 150 HOH HOH . N 6 HOH B 86 487 151 HOH HOH . N 6 HOH B 87 488 152 HOH HOH . N 6 HOH B 88 489 153 HOH HOH . N 6 HOH B 89 490 154 HOH HOH . N 6 HOH B 90 491 155 HOH HOH . N 6 HOH B 91 492 159 HOH HOH . N 6 HOH B 92 493 160 HOH HOH . N 6 HOH B 93 494 164 HOH HOH . N 6 HOH B 94 495 165 HOH HOH . N 6 HOH B 95 496 166 HOH HOH . N 6 HOH B 96 497 168 HOH HOH . N 6 HOH B 97 498 169 HOH HOH . N 6 HOH B 98 499 173 HOH HOH . N 6 HOH B 99 500 174 HOH HOH . N 6 HOH B 100 501 178 HOH HOH . N 6 HOH B 101 502 180 HOH HOH . N 6 HOH B 102 503 181 HOH HOH . N 6 HOH B 103 504 182 HOH HOH . N 6 HOH B 104 505 185 HOH HOH . N 6 HOH B 105 506 187 HOH HOH . N 6 HOH B 106 507 189 HOH HOH . N 6 HOH B 107 508 192 HOH HOH . N 6 HOH B 108 509 194 HOH HOH . N 6 HOH B 109 510 195 HOH HOH . N 6 HOH B 110 511 196 HOH HOH . N 6 HOH B 111 512 198 HOH HOH . N 6 HOH B 112 513 199 HOH HOH . N 6 HOH B 113 514 200 HOH HOH . N 6 HOH B 114 515 201 HOH HOH . N 6 HOH B 115 516 203 HOH HOH . N 6 HOH B 116 517 204 HOH HOH . N 6 HOH B 117 518 206 HOH HOH . N 6 HOH B 118 519 208 HOH HOH . N 6 HOH B 119 520 209 HOH HOH . N 6 HOH B 120 521 210 HOH HOH . N 6 HOH B 121 522 212 HOH HOH . N 6 HOH B 122 523 217 HOH HOH . N 6 HOH B 123 524 219 HOH HOH . N 6 HOH B 124 525 224 HOH HOH . N 6 HOH B 125 526 226 HOH HOH . N 6 HOH B 126 527 232 HOH HOH . N 6 HOH B 127 528 234 HOH HOH . N 6 HOH B 128 529 235 HOH HOH . N 6 HOH B 129 530 239 HOH HOH . N 6 HOH B 130 531 241 HOH HOH . N 6 HOH B 131 532 243 HOH HOH . N 6 HOH B 132 533 245 HOH HOH . N 6 HOH B 133 534 246 HOH HOH . N 6 HOH B 134 535 248 HOH HOH . N 6 HOH B 135 536 249 HOH HOH . N 6 HOH B 136 537 255 HOH HOH . N 6 HOH B 137 538 259 HOH HOH . N 6 HOH B 138 539 260 HOH HOH . N 6 HOH B 139 540 261 HOH HOH . N 6 HOH B 140 541 262 HOH HOH . N 6 HOH B 141 542 265 HOH HOH . N 6 HOH B 142 543 267 HOH HOH . N 6 HOH B 143 544 269 HOH HOH . N 6 HOH B 144 545 270 HOH HOH . N 6 HOH B 145 546 272 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . H 4 3.706 16.696 33.177 1 32.18 ? PB GDP 400 A 1 HETATM 2 O O1B GDP . . . H 4 4.976 17.1 33.887 1 33.28 ? O1B GDP 400 A 1 HETATM 3 O O2B GDP . . . H 4 3.284 17.856 32.279 1 25.21 ? O2B GDP 400 A 1 HETATM 4 O O3B GDP . . . H 4 3.849 15.365 32.437 1 31.25 ? O3B GDP 400 A 1 HETATM 5 O O3A GDP . . . H 4 2.641 16.394 34.386 1 35.46 ? O3A GDP 400 A 1 HETATM 6 P PA GDP . . . H 4 1.341 17.285 34.802 1 32.61 ? PA GDP 400 A 1 HETATM 7 O O1A GDP . . . H 4 0.643 18.076 33.725 1 29.51 ? O1A GDP 400 A 1 HETATM 8 O O2A GDP . . . H 4 0.367 16.395 35.572 1 25.36 ? O2A GDP 400 A 1 HETATM 9 O O5' GDP . . . H 4 1.864 18.32 35.961 1 34.9 ? O5' GDP 400 A 1 HETATM 10 C C5' GDP . . . H 4 2.993 19.161 35.831 1 44.96 ? C5' GDP 400 A 1 HETATM 11 C C4' GDP . . . H 4 3.263 19.843 37.181 1 37.31 ? C4' GDP 400 A 1 HETATM 12 O O4' GDP . . . H 4 2.078 20.544 37.57 1 36.37 ? O4' GDP 400 A 1 HETATM 13 C C3' GDP . . . H 4 3.659 18.93 38.355 1 42.31 ? C3' GDP 400 A 1 HETATM 14 O O3' GDP . . . H 4 4.859 19.422 38.968 1 42.69 ? O3' GDP 400 A 1 HETATM 15 C C2' GDP . . . H 4 2.532 19.033 39.355 1 39.21 ? C2' GDP 400 A 1 HETATM 16 O O2' GDP . . . H 4 2.977 19.011 40.711 1 41.1 ? O2' GDP 400 A 1 HETATM 17 C C1' GDP . . . H 4 2.018 20.415 38.989 1 33.62 ? C1' GDP 400 A 1 HETATM 18 N N9 GDP . . . H 4 0.685 20.643 39.561 1 32.51 ? N9 GDP 400 A 1 HETATM 19 C C8 GDP . . . H 4 -0.34 19.801 39.581 1 25.1 ? C8 GDP 400 A 1 HETATM 20 N N7 GDP . . . H 4 -1.406 20.373 40.208 1 32.14 ? N7 GDP 400 A 1 HETATM 21 C C5 GDP . . . H 4 -0.994 21.598 40.629 1 33.04 ? C5 GDP 400 A 1 HETATM 22 C C6 GDP . . . H 4 -1.565 22.703 41.416 1 28.02 ? C6 GDP 400 A 1 HETATM 23 O O6 GDP . . . H 4 -2.743 22.538 41.81 1 30.04 ? O6 GDP 400 A 1 HETATM 24 N N1 GDP . . . H 4 -0.778 23.814 41.646 1 34.52 ? N1 GDP 400 A 1 HETATM 25 C C2 GDP . . . H 4 0.528 23.908 41.199 1 30.99 ? C2 GDP 400 A 1 HETATM 26 N N2 GDP . . . H 4 1.324 25.023 41.456 1 33.88 ? N2 GDP 400 A 1 HETATM 27 N N3 GDP . . . H 4 1.102 22.903 40.468 1 30.57 ? N3 GDP 400 A 1 HETATM 28 C C4 GDP . . . H 4 0.394 21.776 40.177 1 31.75 ? C4 GDP 400 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #