data_2OH3 # _model_server_result.job_id yZEQes-UNBWSFXByGGLOPw _model_server_result.datetime_utc '2025-02-28 20:59:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2oh3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 2OH3 # _exptl.entry_id 2OH3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2OH3 _cell.length_a 64.36 _cell.length_b 75.28 _cell.length_c 89.79 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OH3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 64.36 75.28 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 29 A ASP 28 1_555 A N MSE 30 A MSE 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C MSE 30 A MSE 29 1_555 A N MSE 31 A MSE 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 A C MSE 31 A MSE 30 1_555 A N GLU 32 A GLU 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C ASP 45 A ASP 44 1_555 A N MSE 46 A MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale5 A C MSE 46 A MSE 45 1_555 A N ALA 47 A ALA 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 A C LEU 69 A LEU 68 1_555 A N MSE 70 A MSE 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale7 A C MSE 70 A MSE 69 1_555 A N SER 71 A SER 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 A C LEU 91 A LEU 90 1_555 A N MSE 92 A MSE 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale9 A C MSE 92 A MSE 91 1_555 A N THR 93 A THR 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale10 A C GLY 108 A GLY 107 1_555 A N MSE 109 A MSE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale11 A C MSE 109 A MSE 108 1_555 A N GLU 110 A GLU 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? metalc ? metalc1 A OE1 GLU 105 A GLU 104 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc2 A OE2 GLU 105 A GLU 104 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? metalc ? metalc3 A OE1 GLU 135 A GLU 134 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.871 ? metalc ? metalc4 A ND1 HIS 138 A HIS 137 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc5 B ZN ZN . A ZN 300 1_555 C N1 IMD . A IMD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 247 n n C1 C2 PGE sing 248 n n C1 H1 PGE sing 249 n n C1 H12 PGE sing 250 n n O1 HO1 PGE sing 251 n n C2 O2 PGE sing 252 n n C2 H2 PGE sing 253 n n C2 H22 PGE sing 254 n n O2 C3 PGE sing 255 n n C3 C4 PGE sing 256 n n C3 H3 PGE sing 257 n n C3 H32 PGE sing 258 n n C4 O3 PGE sing 259 n n C4 H4 PGE sing 260 n n C4 H42 PGE sing 261 n n O4 C6 PGE sing 262 n n O4 HO4 PGE sing 263 n n C6 C5 PGE sing 264 n n C6 H6 PGE sing 265 n n C6 H62 PGE sing 266 n n C5 O3 PGE sing 267 n n C5 H5 PGE sing 268 n n C5 H52 PGE sing 269 n n # _atom_sites.entry_id 2OH3 _atom_sites.fract_transf_matrix[1][1] 0.01554 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01328 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01114 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 300 300 ZN ZN . C 3 IMD A 1 301 1 IMD IMD . D 4 PGE A 1 302 2 PGE PGE . E 4 PGE A 1 303 3 PGE PGE . F 5 HOH A 1 304 4 HOH HOH . F 5 HOH A 2 305 5 HOH HOH . F 5 HOH A 3 306 6 HOH HOH . F 5 HOH A 4 307 7 HOH HOH . F 5 HOH A 5 308 8 HOH HOH . F 5 HOH A 6 309 9 HOH HOH . F 5 HOH A 7 310 10 HOH HOH . F 5 HOH A 8 311 11 HOH HOH . F 5 HOH A 9 312 12 HOH HOH . F 5 HOH A 10 313 13 HOH HOH . F 5 HOH A 11 314 14 HOH HOH . F 5 HOH A 12 315 15 HOH HOH . F 5 HOH A 13 316 16 HOH HOH . F 5 HOH A 14 317 17 HOH HOH . F 5 HOH A 15 318 18 HOH HOH . F 5 HOH A 16 319 19 HOH HOH . F 5 HOH A 17 320 20 HOH HOH . F 5 HOH A 18 321 21 HOH HOH . F 5 HOH A 19 322 22 HOH HOH . F 5 HOH A 20 323 23 HOH HOH . F 5 HOH A 21 324 24 HOH HOH . F 5 HOH A 22 325 25 HOH HOH . F 5 HOH A 23 326 26 HOH HOH . F 5 HOH A 24 327 27 HOH HOH . F 5 HOH A 25 328 28 HOH HOH . F 5 HOH A 26 329 29 HOH HOH . F 5 HOH A 27 330 30 HOH HOH . F 5 HOH A 28 331 31 HOH HOH . F 5 HOH A 29 332 32 HOH HOH . F 5 HOH A 30 333 33 HOH HOH . F 5 HOH A 31 334 34 HOH HOH . F 5 HOH A 32 335 35 HOH HOH . F 5 HOH A 33 336 36 HOH HOH . F 5 HOH A 34 337 37 HOH HOH . F 5 HOH A 35 338 38 HOH HOH . F 5 HOH A 36 339 39 HOH HOH . F 5 HOH A 37 340 40 HOH HOH . F 5 HOH A 38 341 41 HOH HOH . F 5 HOH A 39 342 42 HOH HOH . F 5 HOH A 40 343 43 HOH HOH . F 5 HOH A 41 344 44 HOH HOH . F 5 HOH A 42 345 45 HOH HOH . F 5 HOH A 43 346 46 HOH HOH . F 5 HOH A 44 347 47 HOH HOH . F 5 HOH A 45 348 48 HOH HOH . F 5 HOH A 46 349 49 HOH HOH . F 5 HOH A 47 350 50 HOH HOH . F 5 HOH A 48 351 51 HOH HOH . F 5 HOH A 49 352 52 HOH HOH . F 5 HOH A 50 353 53 HOH HOH . F 5 HOH A 51 354 54 HOH HOH . F 5 HOH A 52 355 55 HOH HOH . F 5 HOH A 53 356 56 HOH HOH . F 5 HOH A 54 357 57 HOH HOH . F 5 HOH A 55 358 58 HOH HOH . F 5 HOH A 56 359 59 HOH HOH . F 5 HOH A 57 360 60 HOH HOH . F 5 HOH A 58 361 61 HOH HOH . F 5 HOH A 59 362 62 HOH HOH . F 5 HOH A 60 363 63 HOH HOH . F 5 HOH A 61 364 64 HOH HOH . F 5 HOH A 62 365 65 HOH HOH . F 5 HOH A 63 366 66 HOH HOH . F 5 HOH A 64 367 67 HOH HOH . F 5 HOH A 65 368 68 HOH HOH . F 5 HOH A 66 369 69 HOH HOH . F 5 HOH A 67 370 70 HOH HOH . F 5 HOH A 68 371 71 HOH HOH . F 5 HOH A 69 372 72 HOH HOH . F 5 HOH A 70 373 73 HOH HOH . F 5 HOH A 71 374 74 HOH HOH . F 5 HOH A 72 375 75 HOH HOH . F 5 HOH A 73 376 76 HOH HOH . F 5 HOH A 74 377 77 HOH HOH . F 5 HOH A 75 378 78 HOH HOH . F 5 HOH A 76 379 79 HOH HOH . F 5 HOH A 77 380 80 HOH HOH . F 5 HOH A 78 381 81 HOH HOH . F 5 HOH A 79 382 82 HOH HOH . F 5 HOH A 80 383 83 HOH HOH . F 5 HOH A 81 384 84 HOH HOH . F 5 HOH A 82 385 85 HOH HOH . F 5 HOH A 83 386 86 HOH HOH . F 5 HOH A 84 387 87 HOH HOH . F 5 HOH A 85 388 88 HOH HOH . F 5 HOH A 86 389 89 HOH HOH . F 5 HOH A 87 390 90 HOH HOH . F 5 HOH A 88 391 91 HOH HOH . F 5 HOH A 89 392 92 HOH HOH . F 5 HOH A 90 393 93 HOH HOH . F 5 HOH A 91 394 94 HOH HOH . F 5 HOH A 92 395 95 HOH HOH . F 5 HOH A 93 396 96 HOH HOH . F 5 HOH A 94 397 97 HOH HOH . F 5 HOH A 95 398 98 HOH HOH . F 5 HOH A 96 399 99 HOH HOH . F 5 HOH A 97 400 100 HOH HOH . F 5 HOH A 98 401 101 HOH HOH . F 5 HOH A 99 402 102 HOH HOH . F 5 HOH A 100 403 103 HOH HOH . F 5 HOH A 101 404 104 HOH HOH . F 5 HOH A 102 405 105 HOH HOH . F 5 HOH A 103 406 106 HOH HOH . F 5 HOH A 104 407 107 HOH HOH . F 5 HOH A 105 408 108 HOH HOH . F 5 HOH A 106 409 109 HOH HOH . F 5 HOH A 107 410 110 HOH HOH . F 5 HOH A 108 411 111 HOH HOH . F 5 HOH A 109 412 112 HOH HOH . F 5 HOH A 110 413 113 HOH HOH . F 5 HOH A 111 414 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . E 4 32.689 15.774 3.58 0.5 40.28 ? C1 PGE 303 A 1 HETATM 2 O O1 PGE . . . E 4 31.644 15.025 4.244 0.5 37.99 ? O1 PGE 303 A 1 HETATM 3 C C2 PGE . . . E 4 32.274 17.244 3.469 0.5 41.28 ? C2 PGE 303 A 1 HETATM 4 O O2 PGE . . . E 4 32.912 17.939 2.388 0.5 42.34 ? O2 PGE 303 A 1 HETATM 5 C C3 PGE . . . E 4 32.199 19.098 1.964 0.5 43.96 ? C3 PGE 303 A 1 HETATM 6 C C4 PGE . . . E 4 32.43 19.35 0.49 0.5 44.49 ? C4 PGE 303 A 1 HETATM 7 O O4 PGE . . . E 4 32.946 16.338 -2.741 0.5 49.36 ? O4 PGE 303 A 1 HETATM 8 C C6 PGE . . . E 4 31.783 16.975 -2.168 0.5 48.8 ? C6 PGE 303 A 1 HETATM 9 C C5 PGE . . . E 4 32.033 18.434 -1.747 0.5 47.64 ? C5 PGE 303 A 1 HETATM 10 O O3 PGE . . . E 4 31.504 18.713 -0.425 0.5 46.14 ? O3 PGE 303 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #