data_2OHU # _model_server_result.job_id ou4UwjBSf5SAakD8Qf3cdQ _model_server_result.datetime_utc '2024-11-25 02:46:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ohu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":389}' # _entry.id 2OHU # _exptl.entry_id 2OHU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2OHU _cell.length_a 102.162 _cell.length_b 102.162 _cell.length_c 168.385 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OHU _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 172 A CYS 155 1_555 A SG CYS 376 A CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf2 A SG CYS 234 A CYS 217 1_555 A SG CYS 399 A CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 A SG CYS 286 A CYS 269 1_555 A SG CYS 336 A CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 2OHU _atom_sites.fract_transf_matrix[1][1] 0.009788 _atom_sites.fract_transf_matrix[1][2] 0.005651 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011303 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005939 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 386 301 IOD IOD . C 2 IOD A 1 387 302 IOD IOD . D 2 IOD A 1 388 303 IOD IOD . E 3 DMS A 1 389 304 DMS DMS . F 4 IP7 A 1 390 1 IP7 IP7 . G 5 HOH A 1 391 2 HOH HOH . G 5 HOH A 2 392 3 HOH HOH . G 5 HOH A 3 393 4 HOH HOH . G 5 HOH A 4 394 5 HOH HOH . G 5 HOH A 5 395 6 HOH HOH . G 5 HOH A 6 396 7 HOH HOH . G 5 HOH A 7 397 8 HOH HOH . G 5 HOH A 8 398 9 HOH HOH . G 5 HOH A 9 399 10 HOH HOH . G 5 HOH A 10 400 11 HOH HOH . G 5 HOH A 11 401 12 HOH HOH . G 5 HOH A 12 402 13 HOH HOH . G 5 HOH A 13 403 15 HOH HOH . G 5 HOH A 14 404 17 HOH HOH . G 5 HOH A 15 405 19 HOH HOH . G 5 HOH A 16 406 21 HOH HOH . G 5 HOH A 17 407 22 HOH HOH . G 5 HOH A 18 408 24 HOH HOH . G 5 HOH A 19 409 25 HOH HOH . G 5 HOH A 20 410 27 HOH HOH . G 5 HOH A 21 411 28 HOH HOH . G 5 HOH A 22 412 29 HOH HOH . G 5 HOH A 23 413 31 HOH HOH . G 5 HOH A 24 414 32 HOH HOH . G 5 HOH A 25 415 33 HOH HOH . G 5 HOH A 26 416 34 HOH HOH . G 5 HOH A 27 417 35 HOH HOH . G 5 HOH A 28 418 36 HOH HOH . G 5 HOH A 29 419 37 HOH HOH . G 5 HOH A 30 420 39 HOH HOH . G 5 HOH A 31 421 40 HOH HOH . G 5 HOH A 32 422 41 HOH HOH . G 5 HOH A 33 423 45 HOH HOH . G 5 HOH A 34 424 46 HOH HOH . G 5 HOH A 35 425 47 HOH HOH . G 5 HOH A 36 426 48 HOH HOH . G 5 HOH A 37 427 49 HOH HOH . G 5 HOH A 38 428 50 HOH HOH . G 5 HOH A 39 429 52 HOH HOH . G 5 HOH A 40 430 53 HOH HOH . G 5 HOH A 41 431 55 HOH HOH . G 5 HOH A 42 432 57 HOH HOH . G 5 HOH A 43 433 59 HOH HOH . G 5 HOH A 44 434 61 HOH HOH . G 5 HOH A 45 435 62 HOH HOH . G 5 HOH A 46 436 65 HOH HOH . G 5 HOH A 47 437 68 HOH HOH . G 5 HOH A 48 438 69 HOH HOH . G 5 HOH A 49 439 71 HOH HOH . G 5 HOH A 50 440 73 HOH HOH . G 5 HOH A 51 441 74 HOH HOH . G 5 HOH A 52 442 75 HOH HOH . G 5 HOH A 53 443 76 HOH HOH . G 5 HOH A 54 444 79 HOH HOH . G 5 HOH A 55 445 80 HOH HOH . G 5 HOH A 56 446 81 HOH HOH . G 5 HOH A 57 447 85 HOH HOH . G 5 HOH A 58 448 86 HOH HOH . G 5 HOH A 59 449 87 HOH HOH . G 5 HOH A 60 450 90 HOH HOH . G 5 HOH A 61 451 91 HOH HOH . G 5 HOH A 62 452 92 HOH HOH . G 5 HOH A 63 453 94 HOH HOH . G 5 HOH A 64 454 96 HOH HOH . G 5 HOH A 65 455 99 HOH HOH . G 5 HOH A 66 456 100 HOH HOH . G 5 HOH A 67 457 101 HOH HOH . G 5 HOH A 68 458 102 HOH HOH . G 5 HOH A 69 459 112 HOH HOH . G 5 HOH A 70 460 114 HOH HOH . G 5 HOH A 71 461 116 HOH HOH . G 5 HOH A 72 462 117 HOH HOH . G 5 HOH A 73 463 118 HOH HOH . G 5 HOH A 74 464 119 HOH HOH . G 5 HOH A 75 465 120 HOH HOH . G 5 HOH A 76 466 122 HOH HOH . G 5 HOH A 77 467 124 HOH HOH . G 5 HOH A 78 468 126 HOH HOH . G 5 HOH A 79 469 127 HOH HOH . G 5 HOH A 80 470 128 HOH HOH . G 5 HOH A 81 471 130 HOH HOH . G 5 HOH A 82 472 131 HOH HOH . G 5 HOH A 83 473 133 HOH HOH . G 5 HOH A 84 474 138 HOH HOH . G 5 HOH A 85 475 139 HOH HOH . G 5 HOH A 86 476 142 HOH HOH . G 5 HOH A 87 477 143 HOH HOH . G 5 HOH A 88 478 146 HOH HOH . G 5 HOH A 89 479 151 HOH HOH . G 5 HOH A 90 480 154 HOH HOH . G 5 HOH A 91 481 157 HOH HOH . G 5 HOH A 92 482 162 HOH HOH . G 5 HOH A 93 483 165 HOH HOH . G 5 HOH A 94 484 166 HOH HOH . G 5 HOH A 95 485 173 HOH HOH . G 5 HOH A 96 486 175 HOH HOH . G 5 HOH A 97 487 180 HOH HOH . G 5 HOH A 98 488 181 HOH HOH . G 5 HOH A 99 489 183 HOH HOH . G 5 HOH A 100 490 184 HOH HOH . G 5 HOH A 101 491 185 HOH HOH . G 5 HOH A 102 492 186 HOH HOH . G 5 HOH A 103 493 188 HOH HOH . G 5 HOH A 104 494 190 HOH HOH . G 5 HOH A 105 495 191 HOH HOH . G 5 HOH A 106 496 192 HOH HOH . G 5 HOH A 107 497 194 HOH HOH . G 5 HOH A 108 498 195 HOH HOH . G 5 HOH A 109 499 196 HOH HOH . G 5 HOH A 110 500 200 HOH HOH . G 5 HOH A 111 501 201 HOH HOH . G 5 HOH A 112 502 202 HOH HOH . G 5 HOH A 113 503 203 HOH HOH . G 5 HOH A 114 504 204 HOH HOH . G 5 HOH A 115 505 205 HOH HOH . G 5 HOH A 116 506 206 HOH HOH . G 5 HOH A 117 507 207 HOH HOH . G 5 HOH A 118 508 209 HOH HOH . G 5 HOH A 119 509 213 HOH HOH . G 5 HOH A 120 510 214 HOH HOH . G 5 HOH A 121 511 216 HOH HOH . G 5 HOH A 122 512 218 HOH HOH . G 5 HOH A 123 513 219 HOH HOH . G 5 HOH A 124 514 221 HOH HOH . G 5 HOH A 125 515 224 HOH HOH . G 5 HOH A 126 516 226 HOH HOH . G 5 HOH A 127 517 227 HOH HOH . G 5 HOH A 128 518 230 HOH HOH . G 5 HOH A 129 519 231 HOH HOH . G 5 HOH A 130 520 232 HOH HOH . G 5 HOH A 131 521 235 HOH HOH . G 5 HOH A 132 522 238 HOH HOH . G 5 HOH A 133 523 241 HOH HOH . G 5 HOH A 134 524 248 HOH HOH . G 5 HOH A 135 525 257 HOH HOH . G 5 HOH A 136 526 258 HOH HOH . G 5 HOH A 137 527 261 HOH HOH . G 5 HOH A 138 528 262 HOH HOH . G 5 HOH A 139 529 263 HOH HOH . G 5 HOH A 140 530 264 HOH HOH . G 5 HOH A 141 531 267 HOH HOH . G 5 HOH A 142 532 268 HOH HOH . G 5 HOH A 143 533 270 HOH HOH . G 5 HOH A 144 534 272 HOH HOH . G 5 HOH A 145 535 274 HOH HOH . G 5 HOH A 146 536 275 HOH HOH . G 5 HOH A 147 537 276 HOH HOH . G 5 HOH A 148 538 277 HOH HOH . G 5 HOH A 149 539 278 HOH HOH . G 5 HOH A 150 540 279 HOH HOH . G 5 HOH A 151 541 280 HOH HOH . G 5 HOH A 152 542 281 HOH HOH . G 5 HOH A 153 543 282 HOH HOH . G 5 HOH A 154 544 283 HOH HOH . G 5 HOH A 155 545 284 HOH HOH . G 5 HOH A 156 546 285 HOH HOH . G 5 HOH A 157 547 286 HOH HOH . G 5 HOH A 158 548 287 HOH HOH . G 5 HOH A 159 549 288 HOH HOH . G 5 HOH A 160 550 289 HOH HOH . G 5 HOH A 161 551 290 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . E 3 61.667 70.961 6.378 1 58.27 ? S DMS 389 A 1 HETATM 2 O O DMS . . . E 3 62.743 69.614 6.848 1 63.94 ? O DMS 389 A 1 HETATM 3 C C1 DMS . . . E 3 60.103 70.802 7.278 1 59.95 ? C1 DMS 389 A 1 HETATM 4 C C2 DMS . . . E 3 62.301 72.477 7.156 1 66.38 ? C2 DMS 389 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #