data_2OI0 # _model_server_result.job_id 9ZmNb2xwJBess-mWlDXA1Q _model_server_result.datetime_utc '2024-11-25 16:22:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2oi0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 2OI0 # _exptl.entry_id 2OI0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 311.42 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3S)-1-{[4-(BUT-2-YN-1-YLOXY)PHENYL]SULFONYL}PYRROLIDINE-3-THIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.58 _cell.angle_gamma 90 _cell.entry_id 2OI0 _cell.length_a 56.55 _cell.length_b 50.06 _cell.length_c 42.98 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OI0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 10 A CYS 225 1_555 A SG CYS 118 A CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 150 A CYS 365 1_555 A SG CYS 254 A CYS 469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf3 A SG CYS 208 A CYS 423 1_555 A SG CYS 238 A CYS 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc1 C S1 283 . A 283 1 1_555 B ZN ZN . A ZN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc2 B ZN ZN . A ZN 2 1_555 A NE2 HIS 190 A HIS 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc3 B ZN ZN . A ZN 2 1_555 A NE2 HIS 194 A HIS 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc4 B ZN ZN . A ZN 2 1_555 A NE2 HIS 200 A HIS 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? # _chem_comp.formula 'C14 H17 N O3 S2' _chem_comp.formula_weight 311.42 _chem_comp.id 283 _chem_comp.mon_nstd_flag . _chem_comp.name (3S)-1-{[4-(BUT-2-YN-1-YLOXY)PHENYL]SULFONYL}PYRROLIDINE-3-THIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 283 sing 1 n y C C4 283 doub 2 n y C H 283 sing 3 n n C1 C9 283 doub 4 n y C1 H1 283 sing 5 n n C2 C9 283 sing 6 n y C2 C3 283 doub 7 n y C2 H2 283 sing 8 n n C3 C4 283 sing 9 n y C3 H3 283 sing 10 n n C4 O 283 sing 11 n n O C5 283 sing 12 n n C5 C8 283 sing 13 n n C5 H51 283 sing 14 n n C5 H52 283 sing 15 n n C6 C7 283 sing 16 n n C6 H61 283 sing 17 n n C6 H62 283 sing 18 n n C6 H63 283 sing 19 n n C7 C8 283 trip 20 n n C9 S 283 sing 21 n n O1 S 283 doub 22 n n O2 S 283 doub 23 n n S N 283 sing 24 n n C10 N 283 sing 25 n n C10 C13 283 sing 26 n n C10 H101 283 sing 27 n n C10 H102 283 sing 28 n n N C11 283 sing 29 n n C11 C12 283 sing 30 n n C11 H111 283 sing 31 n n C11 H112 283 sing 32 n n C12 C13 283 sing 33 n n C12 S1 283 sing 34 n n C12 H12 283 sing 35 n n S1 HS1 283 sing 36 n n C13 H131 283 sing 37 n n C13 H132 283 sing 38 n n # _atom_sites.entry_id 2OI0 _atom_sites.fract_transf_matrix[1][1] 0.017683 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000797 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019976 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02329 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 2 2 ZN ZN . C 3 283 A 1 1 1 283 283 . D 4 HOH A 1 482 501 HOH HOH . D 4 HOH A 2 483 502 HOH HOH . D 4 HOH A 3 484 503 HOH HOH . D 4 HOH A 4 485 504 HOH HOH . D 4 HOH A 5 486 505 HOH HOH . D 4 HOH A 6 487 506 HOH HOH . D 4 HOH A 7 488 507 HOH HOH . D 4 HOH A 8 489 508 HOH HOH . D 4 HOH A 9 490 509 HOH HOH . D 4 HOH A 10 491 510 HOH HOH . D 4 HOH A 11 492 511 HOH HOH . D 4 HOH A 12 493 512 HOH HOH . D 4 HOH A 13 494 513 HOH HOH . D 4 HOH A 14 495 514 HOH HOH . D 4 HOH A 15 496 515 HOH HOH . D 4 HOH A 16 497 516 HOH HOH . D 4 HOH A 17 498 517 HOH HOH . D 4 HOH A 18 499 518 HOH HOH . D 4 HOH A 19 500 519 HOH HOH . D 4 HOH A 20 501 520 HOH HOH . D 4 HOH A 21 502 521 HOH HOH . D 4 HOH A 22 503 522 HOH HOH . D 4 HOH A 23 504 523 HOH HOH . D 4 HOH A 24 505 524 HOH HOH . D 4 HOH A 25 506 525 HOH HOH . D 4 HOH A 26 507 526 HOH HOH . D 4 HOH A 27 508 527 HOH HOH . D 4 HOH A 28 509 528 HOH HOH . D 4 HOH A 29 510 529 HOH HOH . D 4 HOH A 30 511 530 HOH HOH . D 4 HOH A 31 512 531 HOH HOH . D 4 HOH A 32 513 532 HOH HOH . D 4 HOH A 33 514 533 HOH HOH . D 4 HOH A 34 515 534 HOH HOH . D 4 HOH A 35 516 535 HOH HOH . D 4 HOH A 36 517 536 HOH HOH . D 4 HOH A 37 518 537 HOH HOH . D 4 HOH A 38 519 538 HOH HOH . D 4 HOH A 39 520 539 HOH HOH . D 4 HOH A 40 521 540 HOH HOH . D 4 HOH A 41 522 541 HOH HOH . D 4 HOH A 42 523 542 HOH HOH . D 4 HOH A 43 524 543 HOH HOH . D 4 HOH A 44 525 544 HOH HOH . D 4 HOH A 45 526 545 HOH HOH . D 4 HOH A 46 527 546 HOH HOH . D 4 HOH A 47 528 547 HOH HOH . D 4 HOH A 48 529 548 HOH HOH . D 4 HOH A 49 530 549 HOH HOH . D 4 HOH A 50 531 550 HOH HOH . D 4 HOH A 51 532 551 HOH HOH . D 4 HOH A 52 533 552 HOH HOH . D 4 HOH A 53 534 553 HOH HOH . D 4 HOH A 54 535 554 HOH HOH . D 4 HOH A 55 536 555 HOH HOH . D 4 HOH A 56 537 556 HOH HOH . D 4 HOH A 57 538 557 HOH HOH . D 4 HOH A 58 539 558 HOH HOH . D 4 HOH A 59 540 559 HOH HOH . D 4 HOH A 60 541 560 HOH HOH . D 4 HOH A 61 542 561 HOH HOH . D 4 HOH A 62 543 562 HOH HOH . D 4 HOH A 63 544 563 HOH HOH . D 4 HOH A 64 545 564 HOH HOH . D 4 HOH A 65 546 565 HOH HOH . D 4 HOH A 66 547 566 HOH HOH . D 4 HOH A 67 548 567 HOH HOH . D 4 HOH A 68 549 568 HOH HOH . D 4 HOH A 69 550 569 HOH HOH . D 4 HOH A 70 551 570 HOH HOH . D 4 HOH A 71 552 571 HOH HOH . D 4 HOH A 72 553 572 HOH HOH . D 4 HOH A 73 554 573 HOH HOH . D 4 HOH A 74 555 574 HOH HOH . D 4 HOH A 75 556 575 HOH HOH . D 4 HOH A 76 557 576 HOH HOH . D 4 HOH A 77 558 577 HOH HOH . D 4 HOH A 78 559 578 HOH HOH . D 4 HOH A 79 560 579 HOH HOH . D 4 HOH A 80 561 580 HOH HOH . D 4 HOH A 81 562 581 HOH HOH . D 4 HOH A 82 563 582 HOH HOH . D 4 HOH A 83 564 583 HOH HOH . D 4 HOH A 84 565 584 HOH HOH . D 4 HOH A 85 566 585 HOH HOH . D 4 HOH A 86 567 586 HOH HOH . D 4 HOH A 87 568 587 HOH HOH . D 4 HOH A 88 569 588 HOH HOH . D 4 HOH A 89 570 589 HOH HOH . D 4 HOH A 90 571 590 HOH HOH . D 4 HOH A 91 572 591 HOH HOH . D 4 HOH A 92 573 592 HOH HOH . D 4 HOH A 93 574 593 HOH HOH . D 4 HOH A 94 575 594 HOH HOH . D 4 HOH A 95 576 595 HOH HOH . D 4 HOH A 96 577 596 HOH HOH . D 4 HOH A 97 578 597 HOH HOH . D 4 HOH A 98 579 598 HOH HOH . D 4 HOH A 99 580 599 HOH HOH . D 4 HOH A 100 581 600 HOH HOH . D 4 HOH A 101 582 601 HOH HOH . D 4 HOH A 102 583 602 HOH HOH . D 4 HOH A 103 584 603 HOH HOH . D 4 HOH A 104 585 604 HOH HOH . D 4 HOH A 105 586 605 HOH HOH . D 4 HOH A 106 587 606 HOH HOH . D 4 HOH A 107 588 607 HOH HOH . D 4 HOH A 108 589 608 HOH HOH . D 4 HOH A 109 590 609 HOH HOH . D 4 HOH A 110 591 610 HOH HOH . D 4 HOH A 111 592 611 HOH HOH . D 4 HOH A 112 593 612 HOH HOH . D 4 HOH A 113 594 613 HOH HOH . D 4 HOH A 114 595 614 HOH HOH . D 4 HOH A 115 596 615 HOH HOH . D 4 HOH A 116 597 616 HOH HOH . D 4 HOH A 117 598 617 HOH HOH . D 4 HOH A 118 599 618 HOH HOH . D 4 HOH A 119 600 619 HOH HOH . D 4 HOH A 120 601 620 HOH HOH . D 4 HOH A 121 602 621 HOH HOH . D 4 HOH A 122 603 622 HOH HOH . D 4 HOH A 123 604 623 HOH HOH . D 4 HOH A 124 605 624 HOH HOH . D 4 HOH A 125 606 625 HOH HOH . D 4 HOH A 126 607 626 HOH HOH . D 4 HOH A 127 608 627 HOH HOH . D 4 HOH A 128 609 628 HOH HOH . D 4 HOH A 129 610 629 HOH HOH . D 4 HOH A 130 611 630 HOH HOH . D 4 HOH A 131 612 631 HOH HOH . D 4 HOH A 132 613 632 HOH HOH . D 4 HOH A 133 614 633 HOH HOH . D 4 HOH A 134 615 634 HOH HOH . D 4 HOH A 135 616 635 HOH HOH . D 4 HOH A 136 617 636 HOH HOH . D 4 HOH A 137 618 637 HOH HOH . D 4 HOH A 138 619 638 HOH HOH . D 4 HOH A 139 620 639 HOH HOH . D 4 HOH A 140 621 640 HOH HOH . D 4 HOH A 141 622 641 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C 283 . . . C 3 46.085 28.479 2.526 1 28.26 ? C 283 1 A 1 HETATM 2 C C1 283 . . . C 3 45.114 28.815 1.537 1 31.82 ? C1 283 1 A 1 HETATM 3 C C2 283 . . . C 3 43.368 28.517 3.175 1 32.12 ? C2 283 1 A 1 HETATM 4 C C3 283 . . . C 3 44.311 28.183 4.144 1 29.54 ? C3 283 1 A 1 HETATM 5 C C4 283 . . . C 3 45.666 28.162 3.839 1 27.27 ? C4 283 1 A 1 HETATM 6 O O 283 . . . C 3 46.472 27.817 4.923 1 26.79 ? O 283 1 A 1 HETATM 7 C C5 283 . . . C 3 47.914 27.774 4.76 1 27.49 ? C5 283 1 A 1 HETATM 8 C C6 283 . . . C 3 48.585 23.967 3.039 1 28.43 ? C6 283 1 A 1 HETATM 9 C C7 283 . . . C 3 48.412 25.301 3.69 1 29.94 ? C7 283 1 A 1 HETATM 10 C C8 283 . . . C 3 48.269 26.364 4.192 1 27.98 ? C8 283 1 A 1 HETATM 11 C C9 283 . . . C 3 43.753 28.833 1.884 1 33.06 ? C9 283 1 A 1 HETATM 12 O O1 283 . . . C 3 42.995 28.767 -0.494 1 38.51 ? O1 283 1 A 1 HETATM 13 O O2 283 . . . C 3 41.153 28.787 1.199 1 35.15 ? O2 283 1 A 1 HETATM 14 S S 283 . . . C 3 42.465 29.265 0.761 1 41.95 ? S 283 1 A 1 HETATM 15 C C10 283 . . . C 3 40.884 31.586 0.411 1 38.43 ? C10 283 1 A 1 HETATM 16 N N 283 . . . C 3 42.224 31.016 0.755 1 38.06 ? N 283 1 A 1 HETATM 17 C C11 283 . . . C 3 42.491 31.626 2.095 1 40.54 ? C11 283 1 A 1 HETATM 18 C C12 283 . . . C 3 41.2 31.432 2.888 1 37.83 ? C12 283 1 A 1 HETATM 19 S S1 283 . . . C 3 41.158 31.976 4.586 1 37.71 ? S1 283 1 A 1 HETATM 20 C C13 283 . . . C 3 40.29 31.901 1.762 1 37.81 ? C13 283 1 A 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #