data_2OI4
#
_model_server_result.job_id            R9SpN_ZzqmyN5PB78hCluQ 
_model_server_result.datetime_utc      '2024-10-19 17:41:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2oi4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1002}' 
#
_entry.id    2OI4 
#
_exptl.entry_id    2OI4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2OI4 
_cell.length_a            98.104 
_cell.length_b            98.104 
_cell.length_c            80.672 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2OI4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     2OI4 
_atom_sites.fract_transf_matrix[1][1]    0.010193 
_atom_sites.fract_transf_matrix[1][2]    0.005885 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01177 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012396 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL X 1 1001 1 CL CL . 
C 3 JM1 X 1 1000 0 JM1 JM1 . 
D 4 EDO X 1 1002 1 EDO EDO . 
E 4 EDO X 1 1003 2 EDO EDO . 
F 4 EDO X 1 1004 3 EDO EDO . 
G 5 EPE X 1 2691 2691 EPE EPE . 
H 6 HOH X 1 2692 1 HOH HOH . 
H 6 HOH X 2 2693 2 HOH HOH . 
H 6 HOH X 3 2694 3 HOH HOH . 
H 6 HOH X 4 2695 4 HOH HOH . 
H 6 HOH X 5 2696 5 HOH HOH . 
H 6 HOH X 6 2697 6 HOH HOH . 
H 6 HOH X 7 2698 7 HOH HOH . 
H 6 HOH X 8 2699 8 HOH HOH . 
H 6 HOH X 9 2700 9 HOH HOH . 
H 6 HOH X 10 2701 10 HOH HOH . 
H 6 HOH X 11 2702 11 HOH HOH . 
H 6 HOH X 12 2703 12 HOH HOH . 
H 6 HOH X 13 2704 13 HOH HOH . 
H 6 HOH X 14 2705 14 HOH HOH . 
H 6 HOH X 15 2706 15 HOH HOH . 
H 6 HOH X 16 2707 16 HOH HOH . 
H 6 HOH X 17 2708 17 HOH HOH . 
H 6 HOH X 18 2709 18 HOH HOH . 
H 6 HOH X 19 2710 19 HOH HOH . 
H 6 HOH X 20 2711 20 HOH HOH . 
H 6 HOH X 21 2712 21 HOH HOH . 
H 6 HOH X 22 2713 22 HOH HOH . 
H 6 HOH X 23 2714 23 HOH HOH . 
H 6 HOH X 24 2715 24 HOH HOH . 
H 6 HOH X 25 2716 25 HOH HOH . 
H 6 HOH X 26 2717 26 HOH HOH . 
H 6 HOH X 27 2718 27 HOH HOH . 
H 6 HOH X 28 2719 28 HOH HOH . 
H 6 HOH X 29 2720 29 HOH HOH . 
H 6 HOH X 30 2721 30 HOH HOH . 
H 6 HOH X 31 2722 31 HOH HOH . 
H 6 HOH X 32 2723 32 HOH HOH . 
H 6 HOH X 33 2724 33 HOH HOH . 
H 6 HOH X 34 2725 34 HOH HOH . 
H 6 HOH X 35 2726 35 HOH HOH . 
H 6 HOH X 36 2727 36 HOH HOH . 
H 6 HOH X 37 2728 37 HOH HOH . 
H 6 HOH X 38 2729 38 HOH HOH . 
H 6 HOH X 39 2730 39 HOH HOH . 
H 6 HOH X 40 2731 40 HOH HOH . 
H 6 HOH X 41 2732 41 HOH HOH . 
H 6 HOH X 42 2733 42 HOH HOH . 
H 6 HOH X 43 2734 43 HOH HOH . 
H 6 HOH X 44 2735 44 HOH HOH . 
H 6 HOH X 45 2736 45 HOH HOH . 
H 6 HOH X 46 2737 46 HOH HOH . 
H 6 HOH X 47 2738 47 HOH HOH . 
H 6 HOH X 48 2739 48 HOH HOH . 
H 6 HOH X 49 2740 49 HOH HOH . 
H 6 HOH X 50 2741 50 HOH HOH . 
H 6 HOH X 51 2742 51 HOH HOH . 
H 6 HOH X 52 2743 52 HOH HOH . 
H 6 HOH X 53 2744 53 HOH HOH . 
H 6 HOH X 54 2745 54 HOH HOH . 
H 6 HOH X 55 2746 55 HOH HOH . 
H 6 HOH X 56 2747 56 HOH HOH . 
H 6 HOH X 57 2748 57 HOH HOH . 
H 6 HOH X 58 2749 58 HOH HOH . 
H 6 HOH X 59 2750 59 HOH HOH . 
H 6 HOH X 60 2751 60 HOH HOH . 
H 6 HOH X 61 2752 61 HOH HOH . 
H 6 HOH X 62 2753 62 HOH HOH . 
H 6 HOH X 63 2754 63 HOH HOH . 
H 6 HOH X 64 2755 64 HOH HOH . 
H 6 HOH X 65 2756 65 HOH HOH . 
H 6 HOH X 66 2757 66 HOH HOH . 
H 6 HOH X 67 2758 67 HOH HOH . 
H 6 HOH X 68 2759 68 HOH HOH . 
H 6 HOH X 69 2760 69 HOH HOH . 
H 6 HOH X 70 2761 70 HOH HOH . 
H 6 HOH X 71 2762 71 HOH HOH . 
H 6 HOH X 72 2763 72 HOH HOH . 
H 6 HOH X 73 2764 73 HOH HOH . 
H 6 HOH X 74 2765 74 HOH HOH . 
H 6 HOH X 75 2766 75 HOH HOH . 
H 6 HOH X 76 2767 76 HOH HOH . 
H 6 HOH X 77 2768 77 HOH HOH . 
H 6 HOH X 78 2769 78 HOH HOH . 
H 6 HOH X 79 2770 79 HOH HOH . 
H 6 HOH X 80 2771 80 HOH HOH . 
H 6 HOH X 81 2772 81 HOH HOH . 
H 6 HOH X 82 2773 82 HOH HOH . 
H 6 HOH X 83 2774 83 HOH HOH . 
H 6 HOH X 84 2775 84 HOH HOH . 
H 6 HOH X 85 2776 85 HOH HOH . 
H 6 HOH X 86 2777 86 HOH HOH . 
H 6 HOH X 87 2778 87 HOH HOH . 
H 6 HOH X 88 2779 88 HOH HOH . 
H 6 HOH X 89 2780 89 HOH HOH . 
H 6 HOH X 90 2781 90 HOH HOH . 
H 6 HOH X 91 2782 91 HOH HOH . 
H 6 HOH X 92 2783 92 HOH HOH . 
H 6 HOH X 93 2784 93 HOH HOH . 
H 6 HOH X 94 2785 94 HOH HOH . 
H 6 HOH X 95 2786 95 HOH HOH . 
H 6 HOH X 96 2787 96 HOH HOH . 
H 6 HOH X 97 2788 97 HOH HOH . 
H 6 HOH X 98 2789 98 HOH HOH . 
H 6 HOH X 99 2790 99 HOH HOH . 
H 6 HOH X 100 2791 100 HOH HOH . 
H 6 HOH X 101 2792 101 HOH HOH . 
H 6 HOH X 102 2793 102 HOH HOH . 
H 6 HOH X 103 2794 103 HOH HOH . 
H 6 HOH X 104 2795 104 HOH HOH . 
H 6 HOH X 105 2796 105 HOH HOH . 
H 6 HOH X 106 2797 106 HOH HOH . 
H 6 HOH X 107 2798 107 HOH HOH . 
H 6 HOH X 108 2799 108 HOH HOH . 
H 6 HOH X 109 2800 109 HOH HOH . 
H 6 HOH X 110 2801 110 HOH HOH . 
H 6 HOH X 111 2802 111 HOH HOH . 
H 6 HOH X 112 2803 112 HOH HOH . 
H 6 HOH X 113 2804 113 HOH HOH . 
H 6 HOH X 114 2805 114 HOH HOH . 
H 6 HOH X 115 2806 115 HOH HOH . 
H 6 HOH X 116 2807 116 HOH HOH . 
H 6 HOH X 117 2808 117 HOH HOH . 
H 6 HOH X 118 2809 118 HOH HOH . 
H 6 HOH X 119 2810 119 HOH HOH . 
H 6 HOH X 120 2811 120 HOH HOH . 
H 6 HOH X 121 2812 121 HOH HOH . 
H 6 HOH X 122 2813 122 HOH HOH . 
H 6 HOH X 123 2814 123 HOH HOH . 
H 6 HOH X 124 2815 124 HOH HOH . 
H 6 HOH X 125 2816 125 HOH HOH . 
H 6 HOH X 126 2817 126 HOH HOH . 
H 6 HOH X 127 2818 127 HOH HOH . 
H 6 HOH X 128 2819 128 HOH HOH . 
H 6 HOH X 129 2820 129 HOH HOH . 
H 6 HOH X 130 2821 130 HOH HOH . 
H 6 HOH X 131 2822 131 HOH HOH . 
H 6 HOH X 132 2823 132 HOH HOH . 
H 6 HOH X 133 2824 133 HOH HOH . 
H 6 HOH X 134 2825 134 HOH HOH . 
H 6 HOH X 135 2826 135 HOH HOH . 
H 6 HOH X 136 2827 136 HOH HOH . 
H 6 HOH X 137 2828 137 HOH HOH . 
H 6 HOH X 138 2829 138 HOH HOH . 
H 6 HOH X 139 2830 139 HOH HOH . 
H 6 HOH X 140 2831 140 HOH HOH . 
H 6 HOH X 141 2832 141 HOH HOH . 
H 6 HOH X 142 2833 142 HOH HOH . 
H 6 HOH X 143 2834 143 HOH HOH . 
H 6 HOH X 144 2835 144 HOH HOH . 
H 6 HOH X 145 2836 145 HOH HOH . 
H 6 HOH X 146 2837 146 HOH HOH . 
H 6 HOH X 147 2838 147 HOH HOH . 
H 6 HOH X 148 2839 148 HOH HOH . 
H 6 HOH X 149 2840 149 HOH HOH . 
H 6 HOH X 150 2841 150 HOH HOH . 
H 6 HOH X 151 2842 151 HOH HOH . 
H 6 HOH X 152 2843 152 HOH HOH . 
H 6 HOH X 153 2844 153 HOH HOH . 
H 6 HOH X 154 2845 154 HOH HOH . 
H 6 HOH X 155 2846 155 HOH HOH . 
H 6 HOH X 156 2847 156 HOH HOH . 
H 6 HOH X 157 2848 157 HOH HOH . 
H 6 HOH X 158 2849 158 HOH HOH . 
H 6 HOH X 159 2850 159 HOH HOH . 
H 6 HOH X 160 2851 160 HOH HOH . 
H 6 HOH X 161 2852 161 HOH HOH . 
H 6 HOH X 162 2853 162 HOH HOH . 
H 6 HOH X 163 2854 163 HOH HOH . 
H 6 HOH X 164 2855 164 HOH HOH . 
H 6 HOH X 165 2856 165 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 -12.692 -23.679 -1.476 1 59.89 ? C1 EDO 1002 X 1 
HETATM 2 O O1 EDO . . . D 4 -12.905 -25.101 -1.522 1 58.76 ? O1 EDO 1002 X 1 
HETATM 3 C C2 EDO . . . D 4 -12.399 -23.161 -2.881 1 62.19 ? C2 EDO 1002 X 1 
HETATM 4 O O2 EDO . . . D 4 -13.367 -23.672 -3.807 1 58.36 ? O2 EDO 1002 X 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#