data_2OK9 # _model_server_result.job_id 30Byje1BJQdoRCoiAZ0OXA _model_server_result.datetime_utc '2024-10-14 12:25:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ok9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":248}' # _entry.id 2OK9 # _exptl.entry_id 2OK9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 277.941 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'p-Bromophenacyl bromide' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.64 _cell.angle_gamma 90 _cell.entry_id 2OK9 _cell.length_a 38.602 _cell.length_b 70.002 _cell.length_c 43.787 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OK9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 27 1_555 A SG CYS 115 A CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 28 A CYS 29 1_555 A SG CYS 44 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf3 A SG CYS 43 A CYS 44 1_555 A SG CYS 95 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 A SG CYS 49 A CYS 50 1_555 A SG CYS 121 A CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf5 A SG CYS 50 A CYS 51 1_555 A SG CYS 88 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 A SG CYS 57 A CYS 61 1_555 A SG CYS 81 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf7 A SG CYS 75 A CYS 84 1_555 A SG CYS 86 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf8 B SG CYS 26 B CYS 27 1_555 B SG CYS 115 B CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf9 B SG CYS 28 B CYS 29 1_555 B SG CYS 44 B CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf10 B SG CYS 43 B CYS 44 1_555 B SG CYS 95 B CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf11 B SG CYS 49 B CYS 50 1_555 B SG CYS 121 B CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf12 B SG CYS 50 B CYS 51 1_555 B SG CYS 88 B CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf13 B SG CYS 57 B CYS 61 1_555 B SG CYS 81 B CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf14 B SG CYS 75 B CYS 84 1_555 B SG CYS 86 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? covale ? covale1 A ND1 HIS 47 A HIS 48 1_555 C CH PBP . A PBP 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.547 ? covale ? covale2 B ND1 HIS 47 B HIS 48 1_555 E CH PBP . B PBP 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.555 ? # _chem_comp.formula 'C8 H6 Br2 O' _chem_comp.formula_weight 277.941 _chem_comp.id PBP _chem_comp.mon_nstd_flag . _chem_comp.name 'p-Bromophenacyl bromide' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CH CR PBP sing 248 n n CH HH1 PBP sing 249 n n CH HH2 PBP sing 250 n n CG CD1 PBP doub 251 n y CG CD2 PBP sing 252 n y CG CR PBP sing 253 n n CD1 CE1 PBP sing 254 n y CD1 HD1 PBP sing 255 n n CE1 CZ PBP doub 256 n y CE1 HE1 PBP sing 257 n n CD2 CE2 PBP doub 258 n y CD2 HD2 PBP sing 259 n n CE2 CZ PBP sing 260 n y CE2 HE2 PBP sing 261 n n CZ BR PBP sing 262 n n CR O PBP doub 263 n n CH BR2 PBP sing 264 n n # _atom_sites.entry_id 2OK9 _atom_sites.fract_transf_matrix[1][1] 0.025905 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00581 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014285 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023405 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PBP A 1 248 248 PBP PBP . D 3 IPA A 1 202 202 IPA IPA . E 2 PBP B 1 248 248 PBP PBP . F 3 IPA B 1 201 201 IPA IPA . G 4 HOH A 1 249 2 HOH HOH . G 4 HOH A 2 250 3 HOH HOH . G 4 HOH A 3 251 5 HOH HOH . G 4 HOH A 4 252 6 HOH HOH . G 4 HOH A 5 253 7 HOH HOH . G 4 HOH A 6 254 9 HOH HOH . G 4 HOH A 7 255 12 HOH HOH . G 4 HOH A 8 256 13 HOH HOH . G 4 HOH A 9 257 14 HOH HOH . G 4 HOH A 10 258 15 HOH HOH . G 4 HOH A 11 259 17 HOH HOH . G 4 HOH A 12 260 18 HOH HOH . G 4 HOH A 13 261 19 HOH HOH . G 4 HOH A 14 262 20 HOH HOH . G 4 HOH A 15 263 22 HOH HOH . G 4 HOH A 16 264 25 HOH HOH . G 4 HOH A 17 265 28 HOH HOH . G 4 HOH A 18 266 29 HOH HOH . G 4 HOH A 19 267 33 HOH HOH . G 4 HOH A 20 268 34 HOH HOH . G 4 HOH A 21 269 35 HOH HOH . G 4 HOH A 22 270 36 HOH HOH . G 4 HOH A 23 271 37 HOH HOH . G 4 HOH A 24 272 41 HOH HOH . G 4 HOH A 25 273 43 HOH HOH . G 4 HOH A 26 274 48 HOH HOH . G 4 HOH A 27 275 50 HOH HOH . G 4 HOH A 28 276 53 HOH HOH . G 4 HOH A 29 277 54 HOH HOH . G 4 HOH A 30 278 55 HOH HOH . G 4 HOH A 31 279 59 HOH HOH . G 4 HOH A 32 280 60 HOH HOH . G 4 HOH A 33 281 62 HOH HOH . G 4 HOH A 34 282 63 HOH HOH . G 4 HOH A 35 283 65 HOH HOH . G 4 HOH A 36 284 67 HOH HOH . G 4 HOH A 37 285 69 HOH HOH . G 4 HOH A 38 286 70 HOH HOH . G 4 HOH A 39 287 71 HOH HOH . G 4 HOH A 40 288 72 HOH HOH . G 4 HOH A 41 289 77 HOH HOH . G 4 HOH A 42 290 79 HOH HOH . G 4 HOH A 43 291 80 HOH HOH . G 4 HOH A 44 292 81 HOH HOH . G 4 HOH A 45 293 82 HOH HOH . G 4 HOH A 46 294 83 HOH HOH . G 4 HOH A 47 295 86 HOH HOH . G 4 HOH A 48 296 87 HOH HOH . G 4 HOH A 49 297 90 HOH HOH . G 4 HOH A 50 298 93 HOH HOH . G 4 HOH A 51 299 94 HOH HOH . G 4 HOH A 52 300 95 HOH HOH . G 4 HOH A 53 301 97 HOH HOH . G 4 HOH A 54 302 100 HOH HOH . G 4 HOH A 55 303 106 HOH HOH . G 4 HOH A 56 304 107 HOH HOH . G 4 HOH A 57 305 109 HOH HOH . G 4 HOH A 58 306 110 HOH HOH . G 4 HOH A 59 307 112 HOH HOH . G 4 HOH A 60 308 115 HOH HOH . G 4 HOH A 61 309 118 HOH HOH . G 4 HOH A 62 310 120 HOH HOH . G 4 HOH A 63 311 121 HOH HOH . G 4 HOH A 64 312 123 HOH HOH . G 4 HOH A 65 313 125 HOH HOH . G 4 HOH A 66 314 126 HOH HOH . G 4 HOH A 67 315 131 HOH HOH . G 4 HOH A 68 316 132 HOH HOH . G 4 HOH A 69 317 134 HOH HOH . G 4 HOH A 70 318 137 HOH HOH . G 4 HOH A 71 319 138 HOH HOH . G 4 HOH A 72 320 139 HOH HOH . G 4 HOH A 73 321 141 HOH HOH . G 4 HOH A 74 322 145 HOH HOH . G 4 HOH A 75 323 147 HOH HOH . G 4 HOH A 76 324 148 HOH HOH . G 4 HOH A 77 325 151 HOH HOH . G 4 HOH A 78 326 152 HOH HOH . H 4 HOH B 1 249 1 HOH HOH . H 4 HOH B 2 250 4 HOH HOH . H 4 HOH B 3 251 8 HOH HOH . H 4 HOH B 4 252 10 HOH HOH . H 4 HOH B 5 253 11 HOH HOH . H 4 HOH B 6 254 16 HOH HOH . H 4 HOH B 7 255 21 HOH HOH . H 4 HOH B 8 256 23 HOH HOH . H 4 HOH B 9 257 24 HOH HOH . H 4 HOH B 10 258 26 HOH HOH . H 4 HOH B 11 259 27 HOH HOH . H 4 HOH B 12 260 30 HOH HOH . H 4 HOH B 13 261 31 HOH HOH . H 4 HOH B 14 262 32 HOH HOH . H 4 HOH B 15 263 38 HOH HOH . H 4 HOH B 16 264 39 HOH HOH . H 4 HOH B 17 265 40 HOH HOH . H 4 HOH B 18 266 42 HOH HOH . H 4 HOH B 19 267 44 HOH HOH . H 4 HOH B 20 268 45 HOH HOH . H 4 HOH B 21 269 46 HOH HOH . H 4 HOH B 22 270 47 HOH HOH . H 4 HOH B 23 271 49 HOH HOH . H 4 HOH B 24 272 51 HOH HOH . H 4 HOH B 25 273 52 HOH HOH . H 4 HOH B 26 274 56 HOH HOH . H 4 HOH B 27 275 57 HOH HOH . H 4 HOH B 28 276 58 HOH HOH . H 4 HOH B 29 277 61 HOH HOH . H 4 HOH B 30 278 64 HOH HOH . H 4 HOH B 31 279 66 HOH HOH . H 4 HOH B 32 280 68 HOH HOH . H 4 HOH B 33 281 73 HOH HOH . H 4 HOH B 34 282 74 HOH HOH . H 4 HOH B 35 283 75 HOH HOH . H 4 HOH B 36 284 76 HOH HOH . H 4 HOH B 37 285 78 HOH HOH . H 4 HOH B 38 286 84 HOH HOH . H 4 HOH B 39 287 85 HOH HOH . H 4 HOH B 40 288 88 HOH HOH . H 4 HOH B 41 289 89 HOH HOH . H 4 HOH B 42 290 91 HOH HOH . H 4 HOH B 43 291 92 HOH HOH . H 4 HOH B 44 292 96 HOH HOH . H 4 HOH B 45 293 98 HOH HOH . H 4 HOH B 46 294 99 HOH HOH . H 4 HOH B 47 295 101 HOH HOH . H 4 HOH B 48 296 102 HOH HOH . H 4 HOH B 49 297 103 HOH HOH . H 4 HOH B 50 298 104 HOH HOH . H 4 HOH B 51 299 105 HOH HOH . H 4 HOH B 52 300 108 HOH HOH . H 4 HOH B 53 301 111 HOH HOH . H 4 HOH B 54 302 113 HOH HOH . H 4 HOH B 55 303 114 HOH HOH . H 4 HOH B 56 304 116 HOH HOH . H 4 HOH B 57 305 117 HOH HOH . H 4 HOH B 58 306 119 HOH HOH . H 4 HOH B 59 307 122 HOH HOH . H 4 HOH B 60 308 124 HOH HOH . H 4 HOH B 61 309 127 HOH HOH . H 4 HOH B 62 310 128 HOH HOH . H 4 HOH B 63 311 129 HOH HOH . H 4 HOH B 64 312 130 HOH HOH . H 4 HOH B 65 313 133 HOH HOH . H 4 HOH B 66 314 135 HOH HOH . H 4 HOH B 67 315 136 HOH HOH . H 4 HOH B 68 316 140 HOH HOH . H 4 HOH B 69 317 142 HOH HOH . H 4 HOH B 70 318 143 HOH HOH . H 4 HOH B 71 319 144 HOH HOH . H 4 HOH B 72 320 146 HOH HOH . H 4 HOH B 73 321 149 HOH HOH . H 4 HOH B 74 322 150 HOH HOH . H 4 HOH B 75 323 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CH PBP . . . C 2 21.832 37.06 31.454 1 36.06 ? CH PBP 248 A 1 HETATM 2 C CG PBP . . . C 2 23.321 36.956 33.56 1 39.64 ? CG PBP 248 A 1 HETATM 3 C CD1 PBP . . . C 2 24.606 36.898 34.152 1 39.6 ? CD1 PBP 248 A 1 HETATM 4 C CE1 PBP . . . C 2 24.731 36.857 35.532 1 39.81 ? CE1 PBP 248 A 1 HETATM 5 C CD2 PBP . . . C 2 22.179 36.97 34.399 1 38.4 ? CD2 PBP 248 A 1 HETATM 6 C CE2 PBP . . . C 2 22.307 36.927 35.786 1 37.07 ? CE2 PBP 248 A 1 HETATM 7 C CZ PBP . . . C 2 23.586 36.872 36.36 1 48.2 ? CZ PBP 248 A 1 HETATM 8 BR BR PBP . . . C 2 23.781 36.823 38.212 1 58.26 ? BR PBP 248 A 1 HETATM 9 C CR PBP . . . C 2 23.169 37 32.184 1 37.19 ? CR PBP 248 A 1 HETATM 10 O O PBP . . . C 2 24.178 36.981 31.479 1 32.43 ? O PBP 248 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 10 #