data_2OLO # _model_server_result.job_id OcWQEd52wyOwD5PpcaRV2A _model_server_result.datetime_utc '2024-11-14 04:38:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2olo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":3002}' # _entry.id 2OLO # _exptl.entry_id 2OLO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-2-METHYL-2,4-PENTANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 118.54 _cell.angle_gamma 90 _cell.entry_id 2OLO _cell.length_a 87.71 _cell.length_b 90.57 _cell.length_c 85.4 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OLO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 321 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 321 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C8M _struct_conn.ptnr2_label_comp_id FAD _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id FAD _struct_conn.ptnr2_auth_seq_id 1001 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.699 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id MPD _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-2-METHYL-2,4-PENTANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MPD sing 342 n n C1 H11 MPD sing 343 n n C1 H12 MPD sing 344 n n C1 H13 MPD sing 345 n n C2 O2 MPD sing 346 n n C2 CM MPD sing 347 n n C2 C3 MPD sing 348 n n O2 HO2 MPD sing 349 n n CM HM1 MPD sing 350 n n CM HM2 MPD sing 351 n n CM HM3 MPD sing 352 n n C3 C4 MPD sing 353 n n C3 H31 MPD sing 354 n n C3 H32 MPD sing 355 n n C4 O4 MPD sing 356 n n C4 C5 MPD sing 357 n n C4 H4 MPD sing 358 n n O4 HO4 MPD sing 359 n n C5 H51 MPD sing 360 n n C5 H52 MPD sing 361 n n C5 H53 MPD sing 362 n n # _atom_sites.entry_id 2OLO _atom_sites.fract_transf_matrix[1][1] 0.011401 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006201 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011041 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013329 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 1001 1001 FAD FAD . C 3 6PC A 1 2001 2001 6PC 6PC . D 4 MPD A 1 3001 3001 MPD MPD . E 4 MPD A 1 3002 3002 MPD MPD . F 5 HOH A 1 3003 1 HOH HOH . F 5 HOH A 2 3004 2 HOH HOH . F 5 HOH A 3 3005 3 HOH HOH . F 5 HOH A 4 3006 4 HOH HOH . F 5 HOH A 5 3007 5 HOH HOH . F 5 HOH A 6 3008 6 HOH HOH . F 5 HOH A 7 3009 7 HOH HOH . F 5 HOH A 8 3010 8 HOH HOH . F 5 HOH A 9 3011 9 HOH HOH . F 5 HOH A 10 3012 10 HOH HOH . F 5 HOH A 11 3013 11 HOH HOH . F 5 HOH A 12 3014 12 HOH HOH . F 5 HOH A 13 3015 13 HOH HOH . F 5 HOH A 14 3016 14 HOH HOH . F 5 HOH A 15 3017 15 HOH HOH . F 5 HOH A 16 3018 16 HOH HOH . F 5 HOH A 17 3019 17 HOH HOH . F 5 HOH A 18 3020 18 HOH HOH . F 5 HOH A 19 3021 19 HOH HOH . F 5 HOH A 20 3022 20 HOH HOH . F 5 HOH A 21 3023 21 HOH HOH . F 5 HOH A 22 3024 22 HOH HOH . F 5 HOH A 23 3025 23 HOH HOH . F 5 HOH A 24 3026 24 HOH HOH . F 5 HOH A 25 3027 26 HOH HOH . F 5 HOH A 26 3028 27 HOH HOH . F 5 HOH A 27 3029 28 HOH HOH . F 5 HOH A 28 3030 29 HOH HOH . F 5 HOH A 29 3031 30 HOH HOH . F 5 HOH A 30 3032 31 HOH HOH . F 5 HOH A 31 3033 33 HOH HOH . F 5 HOH A 32 3034 34 HOH HOH . F 5 HOH A 33 3035 35 HOH HOH . F 5 HOH A 34 3036 36 HOH HOH . F 5 HOH A 35 3037 37 HOH HOH . F 5 HOH A 36 3038 38 HOH HOH . F 5 HOH A 37 3039 39 HOH HOH . F 5 HOH A 38 3040 40 HOH HOH . F 5 HOH A 39 3041 41 HOH HOH . F 5 HOH A 40 3042 42 HOH HOH . F 5 HOH A 41 3043 43 HOH HOH . F 5 HOH A 42 3044 44 HOH HOH . F 5 HOH A 43 3045 45 HOH HOH . F 5 HOH A 44 3046 46 HOH HOH . F 5 HOH A 45 3047 47 HOH HOH . F 5 HOH A 46 3048 49 HOH HOH . F 5 HOH A 47 3049 50 HOH HOH . F 5 HOH A 48 3050 51 HOH HOH . F 5 HOH A 49 3051 52 HOH HOH . F 5 HOH A 50 3052 53 HOH HOH . F 5 HOH A 51 3053 54 HOH HOH . F 5 HOH A 52 3054 55 HOH HOH . F 5 HOH A 53 3055 56 HOH HOH . F 5 HOH A 54 3056 57 HOH HOH . F 5 HOH A 55 3057 58 HOH HOH . F 5 HOH A 56 3058 59 HOH HOH . F 5 HOH A 57 3059 60 HOH HOH . F 5 HOH A 58 3060 61 HOH HOH . F 5 HOH A 59 3061 62 HOH HOH . F 5 HOH A 60 3062 63 HOH HOH . F 5 HOH A 61 3063 64 HOH HOH . F 5 HOH A 62 3064 65 HOH HOH . F 5 HOH A 63 3065 66 HOH HOH . F 5 HOH A 64 3066 67 HOH HOH . F 5 HOH A 65 3067 68 HOH HOH . F 5 HOH A 66 3068 69 HOH HOH . F 5 HOH A 67 3069 70 HOH HOH . F 5 HOH A 68 3070 71 HOH HOH . F 5 HOH A 69 3071 72 HOH HOH . F 5 HOH A 70 3072 73 HOH HOH . F 5 HOH A 71 3073 74 HOH HOH . F 5 HOH A 72 3074 75 HOH HOH . F 5 HOH A 73 3075 76 HOH HOH . F 5 HOH A 74 3076 77 HOH HOH . F 5 HOH A 75 3077 78 HOH HOH . F 5 HOH A 76 3078 79 HOH HOH . F 5 HOH A 77 3079 80 HOH HOH . F 5 HOH A 78 3080 81 HOH HOH . F 5 HOH A 79 3081 82 HOH HOH . F 5 HOH A 80 3082 83 HOH HOH . F 5 HOH A 81 3083 84 HOH HOH . F 5 HOH A 82 3084 85 HOH HOH . F 5 HOH A 83 3085 86 HOH HOH . F 5 HOH A 84 3086 87 HOH HOH . F 5 HOH A 85 3087 88 HOH HOH . F 5 HOH A 86 3088 89 HOH HOH . F 5 HOH A 87 3089 90 HOH HOH . F 5 HOH A 88 3090 91 HOH HOH . F 5 HOH A 89 3091 92 HOH HOH . F 5 HOH A 90 3092 93 HOH HOH . F 5 HOH A 91 3093 94 HOH HOH . F 5 HOH A 92 3094 95 HOH HOH . F 5 HOH A 93 3095 96 HOH HOH . F 5 HOH A 94 3096 97 HOH HOH . F 5 HOH A 95 3097 98 HOH HOH . F 5 HOH A 96 3098 99 HOH HOH . F 5 HOH A 97 3099 100 HOH HOH . F 5 HOH A 98 3100 101 HOH HOH . F 5 HOH A 99 3101 102 HOH HOH . F 5 HOH A 100 3102 103 HOH HOH . F 5 HOH A 101 3103 104 HOH HOH . F 5 HOH A 102 3104 105 HOH HOH . F 5 HOH A 103 3105 107 HOH HOH . F 5 HOH A 104 3106 109 HOH HOH . F 5 HOH A 105 3107 110 HOH HOH . F 5 HOH A 106 3108 111 HOH HOH . F 5 HOH A 107 3109 112 HOH HOH . F 5 HOH A 108 3110 113 HOH HOH . F 5 HOH A 109 3111 114 HOH HOH . F 5 HOH A 110 3112 115 HOH HOH . F 5 HOH A 111 3113 116 HOH HOH . F 5 HOH A 112 3114 117 HOH HOH . F 5 HOH A 113 3115 118 HOH HOH . F 5 HOH A 114 3116 119 HOH HOH . F 5 HOH A 115 3117 120 HOH HOH . F 5 HOH A 116 3118 121 HOH HOH . F 5 HOH A 117 3119 122 HOH HOH . F 5 HOH A 118 3120 123 HOH HOH . F 5 HOH A 119 3121 125 HOH HOH . F 5 HOH A 120 3122 126 HOH HOH . F 5 HOH A 121 3123 127 HOH HOH . F 5 HOH A 122 3124 128 HOH HOH . F 5 HOH A 123 3125 129 HOH HOH . F 5 HOH A 124 3126 130 HOH HOH . F 5 HOH A 125 3127 131 HOH HOH . F 5 HOH A 126 3128 132 HOH HOH . F 5 HOH A 127 3129 133 HOH HOH . F 5 HOH A 128 3130 134 HOH HOH . F 5 HOH A 129 3131 135 HOH HOH . F 5 HOH A 130 3132 136 HOH HOH . F 5 HOH A 131 3133 137 HOH HOH . F 5 HOH A 132 3134 138 HOH HOH . F 5 HOH A 133 3135 139 HOH HOH . F 5 HOH A 134 3136 140 HOH HOH . F 5 HOH A 135 3137 141 HOH HOH . F 5 HOH A 136 3138 142 HOH HOH . F 5 HOH A 137 3139 143 HOH HOH . F 5 HOH A 138 3140 144 HOH HOH . F 5 HOH A 139 3141 145 HOH HOH . F 5 HOH A 140 3142 146 HOH HOH . F 5 HOH A 141 3143 147 HOH HOH . F 5 HOH A 142 3144 148 HOH HOH . F 5 HOH A 143 3145 149 HOH HOH . F 5 HOH A 144 3146 150 HOH HOH . F 5 HOH A 145 3147 151 HOH HOH . F 5 HOH A 146 3148 152 HOH HOH . F 5 HOH A 147 3149 153 HOH HOH . F 5 HOH A 148 3150 155 HOH HOH . F 5 HOH A 149 3151 156 HOH HOH . F 5 HOH A 150 3152 157 HOH HOH . F 5 HOH A 151 3153 158 HOH HOH . F 5 HOH A 152 3154 159 HOH HOH . F 5 HOH A 153 3155 160 HOH HOH . F 5 HOH A 154 3156 161 HOH HOH . F 5 HOH A 155 3157 162 HOH HOH . F 5 HOH A 156 3158 163 HOH HOH . F 5 HOH A 157 3159 164 HOH HOH . F 5 HOH A 158 3160 165 HOH HOH . F 5 HOH A 159 3161 166 HOH HOH . F 5 HOH A 160 3162 167 HOH HOH . F 5 HOH A 161 3163 168 HOH HOH . F 5 HOH A 162 3164 169 HOH HOH . F 5 HOH A 163 3165 171 HOH HOH . F 5 HOH A 164 3166 172 HOH HOH . F 5 HOH A 165 3167 173 HOH HOH . F 5 HOH A 166 3168 174 HOH HOH . F 5 HOH A 167 3169 175 HOH HOH . F 5 HOH A 168 3170 176 HOH HOH . F 5 HOH A 169 3171 178 HOH HOH . F 5 HOH A 170 3172 180 HOH HOH . F 5 HOH A 171 3173 181 HOH HOH . F 5 HOH A 172 3174 182 HOH HOH . F 5 HOH A 173 3175 183 HOH HOH . F 5 HOH A 174 3176 184 HOH HOH . F 5 HOH A 175 3177 185 HOH HOH . F 5 HOH A 176 3178 186 HOH HOH . F 5 HOH A 177 3179 187 HOH HOH . F 5 HOH A 178 3180 188 HOH HOH . F 5 HOH A 179 3181 189 HOH HOH . F 5 HOH A 180 3182 190 HOH HOH . F 5 HOH A 181 3183 191 HOH HOH . F 5 HOH A 182 3184 192 HOH HOH . F 5 HOH A 183 3185 193 HOH HOH . F 5 HOH A 184 3186 195 HOH HOH . F 5 HOH A 185 3187 196 HOH HOH . F 5 HOH A 186 3188 197 HOH HOH . F 5 HOH A 187 3189 198 HOH HOH . F 5 HOH A 188 3190 200 HOH HOH . F 5 HOH A 189 3191 202 HOH HOH . F 5 HOH A 190 3192 203 HOH HOH . F 5 HOH A 191 3193 204 HOH HOH . F 5 HOH A 192 3194 205 HOH HOH . F 5 HOH A 193 3195 206 HOH HOH . F 5 HOH A 194 3196 207 HOH HOH . F 5 HOH A 195 3197 208 HOH HOH . F 5 HOH A 196 3198 209 HOH HOH . F 5 HOH A 197 3199 210 HOH HOH . F 5 HOH A 198 3200 211 HOH HOH . F 5 HOH A 199 3201 212 HOH HOH . F 5 HOH A 200 3202 213 HOH HOH . F 5 HOH A 201 3203 214 HOH HOH . F 5 HOH A 202 3204 215 HOH HOH . F 5 HOH A 203 3205 216 HOH HOH . F 5 HOH A 204 3206 217 HOH HOH . F 5 HOH A 205 3207 218 HOH HOH . F 5 HOH A 206 3208 219 HOH HOH . F 5 HOH A 207 3209 220 HOH HOH . F 5 HOH A 208 3210 221 HOH HOH . F 5 HOH A 209 3211 222 HOH HOH . F 5 HOH A 210 3212 223 HOH HOH . F 5 HOH A 211 3213 224 HOH HOH . F 5 HOH A 212 3214 225 HOH HOH . F 5 HOH A 213 3215 226 HOH HOH . F 5 HOH A 214 3216 227 HOH HOH . F 5 HOH A 215 3217 228 HOH HOH . F 5 HOH A 216 3218 229 HOH HOH . F 5 HOH A 217 3219 230 HOH HOH . F 5 HOH A 218 3220 231 HOH HOH . F 5 HOH A 219 3221 232 HOH HOH . F 5 HOH A 220 3222 233 HOH HOH . F 5 HOH A 221 3223 234 HOH HOH . F 5 HOH A 222 3224 235 HOH HOH . F 5 HOH A 223 3225 236 HOH HOH . F 5 HOH A 224 3226 237 HOH HOH . F 5 HOH A 225 3227 238 HOH HOH . F 5 HOH A 226 3228 239 HOH HOH . F 5 HOH A 227 3229 242 HOH HOH . F 5 HOH A 228 3230 243 HOH HOH . F 5 HOH A 229 3231 245 HOH HOH . F 5 HOH A 230 3232 246 HOH HOH . F 5 HOH A 231 3233 247 HOH HOH . F 5 HOH A 232 3234 248 HOH HOH . F 5 HOH A 233 3235 249 HOH HOH . F 5 HOH A 234 3236 250 HOH HOH . F 5 HOH A 235 3237 251 HOH HOH . F 5 HOH A 236 3238 252 HOH HOH . F 5 HOH A 237 3239 253 HOH HOH . F 5 HOH A 238 3240 254 HOH HOH . F 5 HOH A 239 3241 255 HOH HOH . F 5 HOH A 240 3242 256 HOH HOH . F 5 HOH A 241 3243 257 HOH HOH . F 5 HOH A 242 3244 258 HOH HOH . F 5 HOH A 243 3245 259 HOH HOH . F 5 HOH A 244 3246 260 HOH HOH . F 5 HOH A 245 3247 261 HOH HOH . F 5 HOH A 246 3248 262 HOH HOH . F 5 HOH A 247 3249 263 HOH HOH . F 5 HOH A 248 3250 264 HOH HOH . F 5 HOH A 249 3251 265 HOH HOH . F 5 HOH A 250 3252 266 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MPD . . . E 4 -32.728 -15.245 25.637 1 52.31 ? C1 MPD 3002 A 1 HETATM 2 C C2 MPD . . . E 4 -31.658 -14.668 26.571 1 51.62 ? C2 MPD 3002 A 1 HETATM 3 O O2 MPD . . . E 4 -30.802 -15.713 27.019 1 50.94 ? O2 MPD 3002 A 1 HETATM 4 C CM MPD . . . E 4 -30.826 -13.651 25.811 1 52.18 ? CM MPD 3002 A 1 HETATM 5 C C3 MPD . . . E 4 -32.32 -13.972 27.791 1 52.2 ? C3 MPD 3002 A 1 HETATM 6 C C4 MPD . . . E 4 -33.201 -14.94 28.637 1 52.84 ? C4 MPD 3002 A 1 HETATM 7 O O4 MPD . . . E 4 -32.398 -16.015 29.18 1 54.25 ? O4 MPD 3002 A 1 HETATM 8 C C5 MPD . . . E 4 -33.831 -14.206 29.825 1 53.98 ? C5 MPD 3002 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 353 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 8 #