data_2OMF
#
_model_server_result.job_id            xS1Zmx3dmfqEG_WhNERd-g 
_model_server_result.datetime_utc      '2024-11-27 04:19:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2omf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":354}' 
#
_entry.id    2OMF 
#
_exptl.entry_id    2OMF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              306.438 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2OMF 
_cell.length_a            118.5 
_cell.length_b            118.5 
_cell.length_c            52.7 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2OMF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        150 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 3 2 1' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 59.25 102.62401 0 
3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -59.25 102.62401 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
#
_chem_comp.formula           'C16 H34 O5' 
_chem_comp.formula_weight    306.438 
_chem_comp.id                C8E 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 C8E sing 70 n n 
C1 H11 C8E sing 71 n n 
C1 H12 C8E sing 72 n n 
C1 H13 C8E sing 73 n n 
C2 C3 C8E sing 74 n n 
C2 H21 C8E sing 75 n n 
C2 H22 C8E sing 76 n n 
C3 C4 C8E sing 77 n n 
C3 H31 C8E sing 78 n n 
C3 H32 C8E sing 79 n n 
C4 C5 C8E sing 80 n n 
C4 H41 C8E sing 81 n n 
C4 H42 C8E sing 82 n n 
C5 C6 C8E sing 83 n n 
C5 H51 C8E sing 84 n n 
C5 H52 C8E sing 85 n n 
C6 C7 C8E sing 86 n n 
C6 H61 C8E sing 87 n n 
C6 H62 C8E sing 88 n n 
C7 C8 C8E sing 89 n n 
C7 H71 C8E sing 90 n n 
C7 H72 C8E sing 91 n n 
C8 O9 C8E sing 92 n n 
C8 H81 C8E sing 93 n n 
C8 H82 C8E sing 94 n n 
O9 C10 C8E sing 95 n n 
C10 C11 C8E sing 96 n n 
C10 H101 C8E sing 97 n n 
C10 H102 C8E sing 98 n n 
C11 O12 C8E sing 99 n n 
C11 H111 C8E sing 100 n n 
C11 H112 C8E sing 101 n n 
O12 C13 C8E sing 102 n n 
C13 C14 C8E sing 103 n n 
C13 H131 C8E sing 104 n n 
C13 H132 C8E sing 105 n n 
C14 O15 C8E sing 106 n n 
C14 H141 C8E sing 107 n n 
C14 H142 C8E sing 108 n n 
O15 C16 C8E sing 109 n n 
C16 C17 C8E sing 110 n n 
C16 H161 C8E sing 111 n n 
C16 H162 C8E sing 112 n n 
C17 O18 C8E sing 113 n n 
C17 H171 C8E sing 114 n n 
C17 H172 C8E sing 115 n n 
O18 C19 C8E sing 116 n n 
C19 C20 C8E sing 117 n n 
C19 H191 C8E sing 118 n n 
C19 H192 C8E sing 119 n n 
C20 O21 C8E sing 120 n n 
C20 H201 C8E sing 121 n n 
C20 H202 C8E sing 122 n n 
O21 HO2 C8E sing 123 n n 
#
_atom_sites.entry_id                     2OMF 
_atom_sites.fract_transf_matrix[1][1]    0.008439 
_atom_sites.fract_transf_matrix[1][2]    0.004872 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009744 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018975 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 C8E A 1 341 341 C8E C8E . 
C 2 C8E A 1 342 342 C8E C8E . 
D 2 C8E A 1 343 343 C8E C8E . 
E 2 C8E A 1 344 344 C8E C8E . 
F 2 C8E A 1 345 345 C8E C8E . 
G 2 C8E A 1 346 346 C8E C8E . 
H 2 C8E A 1 347 347 C8E C8E . 
I 2 C8E A 1 348 348 C8E C8E . 
J 2 C8E A 1 349 349 C8E C8E . 
K 2 C8E A 1 350 350 C8E C8E . 
L 2 C8E A 1 353 353 C8E C8E . 
M 2 C8E A 1 354 354 C8E C8E . 
N 3 HOH A 1 401 401 HOH HOH . 
N 3 HOH A 2 402 402 HOH HOH . 
N 3 HOH A 3 403 403 HOH HOH . 
N 3 HOH A 4 404 404 HOH HOH . 
N 3 HOH A 5 405 405 HOH HOH . 
N 3 HOH A 6 406 406 HOH HOH . 
N 3 HOH A 7 407 407 HOH HOH . 
N 3 HOH A 8 408 408 HOH HOH . 
N 3 HOH A 9 409 409 HOH HOH . 
N 3 HOH A 10 410 410 HOH HOH . 
N 3 HOH A 11 411 411 HOH HOH . 
N 3 HOH A 12 412 412 HOH HOH . 
N 3 HOH A 13 413 413 HOH HOH . 
N 3 HOH A 14 414 414 HOH HOH . 
N 3 HOH A 15 415 415 HOH HOH . 
N 3 HOH A 16 416 416 HOH HOH . 
N 3 HOH A 17 417 417 HOH HOH . 
N 3 HOH A 18 418 418 HOH HOH . 
N 3 HOH A 19 419 419 HOH HOH . 
N 3 HOH A 20 420 420 HOH HOH . 
N 3 HOH A 21 421 421 HOH HOH . 
N 3 HOH A 22 422 422 HOH HOH . 
N 3 HOH A 23 423 423 HOH HOH . 
N 3 HOH A 24 424 424 HOH HOH . 
N 3 HOH A 25 425 425 HOH HOH . 
N 3 HOH A 26 426 426 HOH HOH . 
N 3 HOH A 27 427 427 HOH HOH . 
N 3 HOH A 28 428 428 HOH HOH . 
N 3 HOH A 29 429 429 HOH HOH . 
N 3 HOH A 30 430 430 HOH HOH . 
N 3 HOH A 31 431 431 HOH HOH . 
N 3 HOH A 32 434 434 HOH HOH . 
N 3 HOH A 33 435 435 HOH HOH . 
N 3 HOH A 34 436 436 HOH HOH . 
N 3 HOH A 35 437 437 HOH HOH . 
N 3 HOH A 36 438 438 HOH HOH . 
N 3 HOH A 37 439 439 HOH HOH . 
N 3 HOH A 38 440 440 HOH HOH . 
N 3 HOH A 39 441 441 HOH HOH . 
N 3 HOH A 40 442 442 HOH HOH . 
N 3 HOH A 41 443 443 HOH HOH . 
N 3 HOH A 42 444 444 HOH HOH . 
N 3 HOH A 43 445 445 HOH HOH . 
N 3 HOH A 44 446 446 HOH HOH . 
N 3 HOH A 45 447 447 HOH HOH . 
N 3 HOH A 46 448 448 HOH HOH . 
N 3 HOH A 47 449 449 HOH HOH . 
N 3 HOH A 48 450 450 HOH HOH . 
N 3 HOH A 49 451 451 HOH HOH . 
N 3 HOH A 50 452 452 HOH HOH . 
N 3 HOH A 51 453 453 HOH HOH . 
N 3 HOH A 52 454 454 HOH HOH . 
N 3 HOH A 53 455 455 HOH HOH . 
N 3 HOH A 54 456 456 HOH HOH . 
N 3 HOH A 55 457 457 HOH HOH . 
N 3 HOH A 56 458 458 HOH HOH . 
N 3 HOH A 57 460 460 HOH HOH . 
N 3 HOH A 58 461 461 HOH HOH . 
N 3 HOH A 59 462 462 HOH HOH . 
N 3 HOH A 60 463 463 HOH HOH . 
N 3 HOH A 61 464 464 HOH HOH . 
N 3 HOH A 62 465 465 HOH HOH . 
N 3 HOH A 63 466 466 HOH HOH . 
N 3 HOH A 64 469 469 HOH HOH . 
N 3 HOH A 65 470 470 HOH HOH . 
N 3 HOH A 66 471 471 HOH HOH . 
N 3 HOH A 67 472 472 HOH HOH . 
N 3 HOH A 68 473 473 HOH HOH . 
N 3 HOH A 69 475 475 HOH HOH . 
N 3 HOH A 70 476 476 HOH HOH . 
N 3 HOH A 71 477 477 HOH HOH . 
N 3 HOH A 72 478 478 HOH HOH . 
N 3 HOH A 73 479 479 HOH HOH . 
N 3 HOH A 74 480 480 HOH HOH . 
N 3 HOH A 75 481 481 HOH HOH . 
N 3 HOH A 76 482 482 HOH HOH . 
N 3 HOH A 77 483 483 HOH HOH . 
N 3 HOH A 78 484 484 HOH HOH . 
N 3 HOH A 79 487 487 HOH HOH . 
N 3 HOH A 80 488 488 HOH HOH . 
N 3 HOH A 81 490 490 HOH HOH . 
N 3 HOH A 82 491 491 HOH HOH . 
N 3 HOH A 83 492 492 HOH HOH . 
N 3 HOH A 84 493 493 HOH HOH . 
N 3 HOH A 85 494 494 HOH HOH . 
N 3 HOH A 86 495 495 HOH HOH . 
N 3 HOH A 87 496 496 HOH HOH . 
N 3 HOH A 88 497 497 HOH HOH . 
N 3 HOH A 89 498 498 HOH HOH . 
N 3 HOH A 90 499 499 HOH HOH . 
N 3 HOH A 91 500 500 HOH HOH . 
N 3 HOH A 92 501 501 HOH HOH . 
N 3 HOH A 93 503 503 HOH HOH . 
N 3 HOH A 94 504 504 HOH HOH . 
N 3 HOH A 95 505 505 HOH HOH . 
N 3 HOH A 96 506 506 HOH HOH . 
N 3 HOH A 97 507 507 HOH HOH . 
N 3 HOH A 98 508 508 HOH HOH . 
N 3 HOH A 99 509 509 HOH HOH . 
N 3 HOH A 100 511 511 HOH HOH . 
N 3 HOH A 101 512 512 HOH HOH . 
N 3 HOH A 102 513 513 HOH HOH . 
N 3 HOH A 103 514 514 HOH HOH . 
N 3 HOH A 104 515 515 HOH HOH . 
N 3 HOH A 105 516 516 HOH HOH . 
N 3 HOH A 106 518 518 HOH HOH . 
N 3 HOH A 107 524 524 HOH HOH . 
N 3 HOH A 108 526 526 HOH HOH . 
N 3 HOH A 109 527 527 HOH HOH . 
N 3 HOH A 110 530 530 HOH HOH . 
N 3 HOH A 111 531 531 HOH HOH . 
N 3 HOH A 112 532 532 HOH HOH . 
N 3 HOH A 113 533 533 HOH HOH . 
N 3 HOH A 114 534 534 HOH HOH . 
N 3 HOH A 115 535 535 HOH HOH . 
N 3 HOH A 116 537 537 HOH HOH . 
N 3 HOH A 117 538 538 HOH HOH . 
N 3 HOH A 118 541 541 HOH HOH . 
N 3 HOH A 119 545 545 HOH HOH . 
N 3 HOH A 120 547 547 HOH HOH . 
N 3 HOH A 121 549 549 HOH HOH . 
N 3 HOH A 122 550 550 HOH HOH . 
N 3 HOH A 123 553 553 HOH HOH . 
N 3 HOH A 124 554 554 HOH HOH . 
N 3 HOH A 125 555 555 HOH HOH . 
N 3 HOH A 126 556 556 HOH HOH . 
N 3 HOH A 127 557 557 HOH HOH . 
N 3 HOH A 128 558 558 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 C8E . . . M 2 -21.344 39.388 27.527 1 51.45 ? C4 C8E 354 A 1 
HETATM 2 C C5 C8E . . . M 2 -21.028 37.941 27.867 1 47.83 ? C5 C8E 354 A 1 
HETATM 3 C C6 C8E . . . M 2 -20.312 37.836 29.208 1 46.09 ? C6 C8E 354 A 1 
HETATM 4 C C7 C8E . . . M 2 -19.488 36.562 29.285 1 45.03 ? C7 C8E 354 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#