data_2ONB # _model_server_result.job_id 7T5whM7bmVcPiloB1KbGqw _model_server_result.datetime_utc '2024-11-25 01:53:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2onb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":316}' # _entry.id 2ONB # _exptl.entry_id 2ONB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2ONB _cell.length_a 95.69 _cell.length_b 95.69 _cell.length_c 82.503 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ONB _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 55.002 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 42 A ARG 42 1_555 A N CME 43 A CME 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C CME 43 A CME 43 1_555 A N GLY 44 A GLY 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale3 A C MET 179 A MET 179 1_555 A N CME 180 A CME 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C CME 180 A CME 180 1_555 A N ALA 181 A ALA 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 A C PRO 194 A PRO 194 1_555 A N CME 195 A CME 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale6 A C CME 195 A CME 195 1_555 A N HIS 196 A HIS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 A C LEU 198 A LEU 198 1_555 A N CME 199 A CME 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale8 A C CME 199 A CME 199 1_555 A N GLN 200 A GLN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 340 n n S O2 SO4 doub 341 n n S O3 SO4 sing 342 n n S O4 SO4 sing 343 n n # _atom_sites.entry_id 2ONB _atom_sites.fract_transf_matrix[1][1] 0.01045 _atom_sites.fract_transf_matrix[1][2] 0.006034 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012067 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012121 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 316 316 SO4 SO4 . C 3 EDO A 1 314 314 EDO EDO . D 4 7PA A 1 319 319 7PA 7PA . E 5 HOH A 1 320 1 HOH HOH . E 5 HOH A 2 321 3 HOH HOH . E 5 HOH A 3 322 4 HOH HOH . E 5 HOH A 4 323 5 HOH HOH . E 5 HOH A 5 324 6 HOH HOH . E 5 HOH A 6 325 7 HOH HOH . E 5 HOH A 7 326 8 HOH HOH . E 5 HOH A 8 327 11 HOH HOH . E 5 HOH A 9 328 13 HOH HOH . E 5 HOH A 10 329 14 HOH HOH . E 5 HOH A 11 330 15 HOH HOH . E 5 HOH A 12 331 16 HOH HOH . E 5 HOH A 13 332 18 HOH HOH . E 5 HOH A 14 333 20 HOH HOH . E 5 HOH A 15 334 22 HOH HOH . E 5 HOH A 16 335 23 HOH HOH . E 5 HOH A 17 336 24 HOH HOH . E 5 HOH A 18 337 25 HOH HOH . E 5 HOH A 19 338 26 HOH HOH . E 5 HOH A 20 339 29 HOH HOH . E 5 HOH A 21 340 30 HOH HOH . E 5 HOH A 22 341 31 HOH HOH . E 5 HOH A 23 342 32 HOH HOH . E 5 HOH A 24 343 33 HOH HOH . E 5 HOH A 25 344 34 HOH HOH . E 5 HOH A 26 345 35 HOH HOH . E 5 HOH A 27 346 36 HOH HOH . E 5 HOH A 28 347 37 HOH HOH . E 5 HOH A 29 348 38 HOH HOH . E 5 HOH A 30 349 39 HOH HOH . E 5 HOH A 31 350 41 HOH HOH . E 5 HOH A 32 351 43 HOH HOH . E 5 HOH A 33 352 44 HOH HOH . E 5 HOH A 34 353 45 HOH HOH . E 5 HOH A 35 354 48 HOH HOH . E 5 HOH A 36 355 52 HOH HOH . E 5 HOH A 37 356 57 HOH HOH . E 5 HOH A 38 357 58 HOH HOH . E 5 HOH A 39 358 61 HOH HOH . E 5 HOH A 40 359 62 HOH HOH . E 5 HOH A 41 360 64 HOH HOH . E 5 HOH A 42 361 66 HOH HOH . E 5 HOH A 43 362 71 HOH HOH . E 5 HOH A 44 363 74 HOH HOH . E 5 HOH A 45 364 77 HOH HOH . E 5 HOH A 46 365 79 HOH HOH . E 5 HOH A 47 366 82 HOH HOH . E 5 HOH A 48 367 83 HOH HOH . E 5 HOH A 49 368 84 HOH HOH . E 5 HOH A 50 369 86 HOH HOH . E 5 HOH A 51 370 87 HOH HOH . E 5 HOH A 52 371 89 HOH HOH . E 5 HOH A 53 372 96 HOH HOH . E 5 HOH A 54 373 97 HOH HOH . E 5 HOH A 55 374 100 HOH HOH . E 5 HOH A 56 375 101 HOH HOH . E 5 HOH A 57 376 102 HOH HOH . E 5 HOH A 58 377 106 HOH HOH . E 5 HOH A 59 378 108 HOH HOH . E 5 HOH A 60 379 109 HOH HOH . E 5 HOH A 61 380 112 HOH HOH . E 5 HOH A 62 381 113 HOH HOH . E 5 HOH A 63 382 114 HOH HOH . E 5 HOH A 64 383 116 HOH HOH . E 5 HOH A 65 384 121 HOH HOH . E 5 HOH A 66 385 122 HOH HOH . E 5 HOH A 67 386 134 HOH HOH . E 5 HOH A 68 387 136 HOH HOH . E 5 HOH A 69 388 142 HOH HOH . E 5 HOH A 70 389 144 HOH HOH . E 5 HOH A 71 390 146 HOH HOH . E 5 HOH A 72 391 147 HOH HOH . E 5 HOH A 73 392 149 HOH HOH . E 5 HOH A 74 393 159 HOH HOH . E 5 HOH A 75 394 162 HOH HOH . E 5 HOH A 76 395 163 HOH HOH . E 5 HOH A 77 396 168 HOH HOH . E 5 HOH A 78 397 169 HOH HOH . E 5 HOH A 79 398 174 HOH HOH . E 5 HOH A 80 399 183 HOH HOH . E 5 HOH A 81 400 184 HOH HOH . E 5 HOH A 82 401 202 HOH HOH . E 5 HOH A 83 402 204 HOH HOH . E 5 HOH A 84 403 208 HOH HOH . E 5 HOH A 85 404 210 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 57.637 -18.077 20.833 1 49.78 ? S SO4 316 A 1 HETATM 2 O O1 SO4 . . . B 2 58.776 -18.737 20.164 1 52.47 ? O1 SO4 316 A 1 HETATM 3 O O2 SO4 . . . B 2 58.162 -17.004 21.689 1 48.43 ? O2 SO4 316 A 1 HETATM 4 O O3 SO4 . . . B 2 56.904 -19.059 21.642 1 50.79 ? O3 SO4 316 A 1 HETATM 5 O O4 SO4 . . . B 2 56.728 -17.513 19.824 1 51.1 ? O4 SO4 316 A 1 # _model_server_stats.io_time_ms 96 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #