data_2ONG # _model_server_result.job_id t2fTz_OyAXkolYQrJxC5UQ _model_server_result.datetime_utc '2024-12-02 10:41:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ong # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1604}' # _entry.id 2ONG # _exptl.entry_id 2ONG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 209.24 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ONG _cell.length_a 200.48 _cell.length_b 200.48 _cell.length_c 123.41 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ONG _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 M N N ? 4 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 296 A ASP 352 1_555 C MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc2 A OD2 ASP 296 A ASP 352 1_555 D MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc3 A OD2 ASP 300 A ASP 356 1_555 C MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc4 A OD2 ASP 300 A ASP 356 1_555 D MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc5 A OD2 ASP 440 A ASP 496 1_555 E MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc6 A OG1 THR 444 A THR 500 1_555 E MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc7 F O2B FPG . A FPG 600 1_555 C MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc8 F O2A FPG . A FPG 600 1_555 D MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? metalc ? metalc9 F O2B FPG . A FPG 600 1_555 D MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc10 F O1A FPG . A FPG 600 1_555 E MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc11 F O1B FPG . A FPG 600 1_555 E MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc12 B OD2 ASP 296 B ASP 352 1_555 I MN MN . B MN 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? metalc ? metalc13 B OD1 ASP 296 B ASP 352 1_555 J MN MN . B MN 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc14 B OD1 ASP 300 B ASP 356 1_555 I MN MN . B MN 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? metalc ? metalc15 B OD1 ASP 300 B ASP 356 1_555 J MN MN . B MN 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc16 B OD2 ASP 440 B ASP 496 1_555 K MN MN . B MN 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc17 L O2B FPG . B FPG 1600 1_555 I MN MN . B MN 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc18 L O2A FPG . B FPG 1600 1_555 J MN MN . B MN 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.902 ? metalc ? metalc19 L O2B FPG . B FPG 1600 1_555 J MN MN . B MN 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc20 L O1A FPG . B FPG 1600 1_555 K MN MN . B MN 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc21 L O1B FPG . B FPG 1600 1_555 K MN MN . B MN 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? # _chem_comp.formula 'C8 H19 N O5' _chem_comp.formula_weight 209.24 _chem_comp.id BTB _chem_comp.mon_nstd_flag . _chem_comp.name 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'BIS-TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BTB sing 70 n n C1 C2 BTB sing 71 n n C1 H11 BTB sing 72 n n C1 H12 BTB sing 73 n n O1 HO1 BTB sing 74 n n C2 C3 BTB sing 75 n n C2 C4 BTB sing 76 n n C2 N BTB sing 77 n n C3 O3 BTB sing 78 n n C3 H31 BTB sing 79 n n C3 H32 BTB sing 80 n n O3 HO3 BTB sing 81 n n C4 O4 BTB sing 82 n n C4 H41 BTB sing 83 n n C4 H42 BTB sing 84 n n O4 HO4 BTB sing 85 n n N C5 BTB sing 86 n n N C7 BTB sing 87 n n C5 C6 BTB sing 88 n n C5 H51 BTB sing 89 n n C5 H52 BTB sing 90 n n C6 O6 BTB sing 91 n n C6 H61 BTB sing 92 n n C6 H62 BTB sing 93 n n O6 HO6 BTB sing 94 n n C7 C8 BTB sing 95 n n C7 H71 BTB sing 96 n n C7 H72 BTB sing 97 n n C8 O8 BTB sing 98 n n C8 H81 BTB sing 99 n n C8 H82 BTB sing 100 n n O8 HO8 BTB sing 101 n n # _atom_sites.entry_id 2ONG _atom_sites.fract_transf_matrix[1][1] 0.004988 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004988 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008103 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 601 601 MN MN . D 2 MN A 1 602 602 MN MN . E 2 MN A 1 603 603 MN MN . F 3 FPG A 1 600 600 FPG FPG . G 4 BTB A 1 604 604 BTB BTB . H 4 BTB A 1 605 605 BTB BTB . I 2 MN B 1 1601 1601 MN MN4 . J 2 MN B 1 1602 1602 MN MN5 . K 2 MN B 1 1603 1603 MN MN6 . L 3 FPG B 1 1600 1600 FPG FPG . M 4 BTB B 1 1604 1604 BTB BTB . N 4 BTB B 1 1605 1605 BTB BTB . O 5 HOH A 1 700 700 HOH TIP . O 5 HOH A 2 704 704 HOH TIP . O 5 HOH A 3 705 705 HOH TIP . O 5 HOH A 4 706 706 HOH TIP . O 5 HOH A 5 707 707 HOH TIP . O 5 HOH A 6 708 708 HOH TIP . O 5 HOH A 7 711 711 HOH TIP . O 5 HOH A 8 713 713 HOH TIP . O 5 HOH A 9 718 718 HOH TIP . O 5 HOH A 10 723 723 HOH TIP . O 5 HOH A 11 727 727 HOH TIP . O 5 HOH A 12 732 732 HOH TIP . O 5 HOH A 13 734 734 HOH TIP . O 5 HOH A 14 735 735 HOH TIP . O 5 HOH A 15 739 739 HOH TIP . O 5 HOH A 16 740 740 HOH TIP . O 5 HOH A 17 741 741 HOH TIP . O 5 HOH A 18 742 742 HOH TIP . O 5 HOH A 19 743 743 HOH TIP . O 5 HOH A 20 745 745 HOH TIP . O 5 HOH A 21 748 748 HOH TIP . O 5 HOH A 22 752 752 HOH TIP . O 5 HOH A 23 753 753 HOH TIP . O 5 HOH A 24 754 754 HOH TIP . O 5 HOH A 25 755 755 HOH TIP . O 5 HOH A 26 756 756 HOH TIP . O 5 HOH A 27 757 757 HOH TIP . O 5 HOH A 28 758 758 HOH TIP . O 5 HOH A 29 759 759 HOH TIP . O 5 HOH A 30 760 760 HOH TIP . O 5 HOH A 31 761 761 HOH TIP . O 5 HOH A 32 762 762 HOH TIP . O 5 HOH A 33 771 771 HOH TIP . O 5 HOH A 34 782 782 HOH TIP . O 5 HOH A 35 786 786 HOH TIP . O 5 HOH A 36 787 787 HOH TIP . O 5 HOH A 37 788 788 HOH TIP . O 5 HOH A 38 789 789 HOH TIP . O 5 HOH A 39 791 791 HOH TIP . P 5 HOH B 1 701 701 HOH TIP . P 5 HOH B 2 702 702 HOH TIP . P 5 HOH B 3 703 703 HOH TIP . P 5 HOH B 4 709 709 HOH TIP . P 5 HOH B 5 710 710 HOH TIP . P 5 HOH B 6 712 712 HOH TIP . P 5 HOH B 7 714 714 HOH TIP . P 5 HOH B 8 715 715 HOH TIP . P 5 HOH B 9 716 716 HOH TIP . P 5 HOH B 10 717 717 HOH TIP . P 5 HOH B 11 719 719 HOH TIP . P 5 HOH B 12 720 720 HOH TIP . P 5 HOH B 13 721 721 HOH TIP . P 5 HOH B 14 722 722 HOH TIP . P 5 HOH B 15 724 724 HOH TIP . P 5 HOH B 16 725 725 HOH TIP . P 5 HOH B 17 726 726 HOH TIP . P 5 HOH B 18 728 728 HOH TIP . P 5 HOH B 19 729 729 HOH TIP . P 5 HOH B 20 730 730 HOH TIP . P 5 HOH B 21 731 731 HOH TIP . P 5 HOH B 22 733 733 HOH TIP . P 5 HOH B 23 736 736 HOH TIP . P 5 HOH B 24 737 737 HOH TIP . P 5 HOH B 25 738 738 HOH TIP . P 5 HOH B 26 744 744 HOH TIP . P 5 HOH B 27 746 746 HOH TIP . P 5 HOH B 28 747 747 HOH TIP . P 5 HOH B 29 749 749 HOH TIP . P 5 HOH B 30 750 750 HOH TIP . P 5 HOH B 31 751 751 HOH TIP . P 5 HOH B 32 763 763 HOH TIP . P 5 HOH B 33 764 764 HOH TIP . P 5 HOH B 34 765 765 HOH TIP . P 5 HOH B 35 766 766 HOH TIP . P 5 HOH B 36 767 767 HOH TIP . P 5 HOH B 37 768 768 HOH TIP . P 5 HOH B 38 769 769 HOH TIP . P 5 HOH B 39 770 770 HOH TIP . P 5 HOH B 40 772 772 HOH TIP . P 5 HOH B 41 773 773 HOH TIP . P 5 HOH B 42 774 774 HOH TIP . P 5 HOH B 43 775 775 HOH TIP . P 5 HOH B 44 776 776 HOH TIP . P 5 HOH B 45 777 777 HOH TIP . P 5 HOH B 46 778 778 HOH TIP . P 5 HOH B 47 779 779 HOH TIP . P 5 HOH B 48 780 780 HOH TIP . P 5 HOH B 49 781 781 HOH TIP . P 5 HOH B 50 783 783 HOH TIP . P 5 HOH B 51 784 784 HOH TIP . P 5 HOH B 52 785 785 HOH TIP . P 5 HOH B 53 790 790 HOH TIP . P 5 HOH B 54 792 792 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BTB . . . M 4 -40.47 44.826 -63.075 1 99.77 ? C1 BTB 1604 B 1 HETATM 2 O O1 BTB . . . M 4 -40.198 44.968 -64.484 1 100 ? O1 BTB 1604 B 1 HETATM 3 C C2 BTB . . . M 4 -39.613 43.72 -62.365 1 96.61 ? C2 BTB 1604 B 1 HETATM 4 C C3 BTB . . . M 4 -39.675 43.303 -60.858 1 99.3 ? C3 BTB 1604 B 1 HETATM 5 O O3 BTB . . . M 4 -38.762 42.232 -60.554 1 100 ? O3 BTB 1604 B 1 HETATM 6 C C4 BTB . . . M 4 -38.366 43.129 -63.168 1 95.59 ? C4 BTB 1604 B 1 HETATM 7 O O4 BTB . . . M 4 -38.337 43.495 -64.556 1 92.04 ? O4 BTB 1604 B 1 HETATM 8 N N BTB . . . M 4 -38.773 45.093 -61.874 1 89.01 ? N BTB 1604 B 1 HETATM 9 C C5 BTB . . . M 4 -39.196 45.888 -60.567 1 82.6 ? C5 BTB 1604 B 1 HETATM 10 C C6 BTB . . . M 4 -40.68 46.335 -60.381 1 75.01 ? C6 BTB 1604 B 1 HETATM 11 O O6 BTB . . . M 4 -40.924 46.594 -59.001 1 67.89 ? O6 BTB 1604 B 1 HETATM 12 C C7 BTB . . . M 4 -37.235 44.863 -61.728 1 77 ? C7 BTB 1604 B 1 HETATM 13 C C8 BTB . . . M 4 -36.651 44.995 -60.296 1 71.49 ? C8 BTB 1604 B 1 HETATM 14 O O8 BTB . . . M 4 -35.66 43.982 -60.087 1 67.65 ? O8 BTB 1604 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #