data_2ONH # _model_server_result.job_id 2DpO8Rkf57KBw5yO8QklWA _model_server_result.datetime_utc '2024-12-02 13:48:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2onh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1603}' # _entry.id 2ONH # _exptl.entry_id 2ONH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ONH _cell.length_a 198.66 _cell.length_b 198.66 _cell.length_c 122.67 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ONH _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 296 A ASP 352 1_555 C MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc2 A OD1 ASP 300 A ASP 356 1_555 D MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc3 F O3B F3P . A F3P 600 1_555 C MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc4 F O1A F3P . A F3P 600 1_555 E MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc5 F O2B F3P . A F3P 600 1_555 E MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc6 B OD1 ASP 300 B ASP 356 1_555 I MN MN . B MN 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc7 K O3B F3P . B F3P 1600 1_555 I MN MN . B MN 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? metalc ? metalc8 K O2B F3P . B F3P 1600 1_555 J MN MN . B MN 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2ONH _atom_sites.fract_transf_matrix[1][1] 0.005034 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005034 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008152 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 601 601 MN MN . D 2 MN A 1 602 602 MN MN . E 2 MN A 1 603 603 MN MN . F 3 F3P A 1 600 600 F3P F3P . G 4 BTB A 1 604 604 BTB BTB . H 2 MN B 1 1601 1601 MN MN . I 2 MN B 1 1602 1602 MN MN . J 2 MN B 1 1603 1603 MN MN . K 3 F3P B 1 1600 1600 F3P F3P . L 5 HOH A 1 700 700 HOH HOH . L 5 HOH A 2 701 701 HOH HOH . L 5 HOH A 3 702 702 HOH HOH . L 5 HOH A 4 703 703 HOH HOH . L 5 HOH A 5 704 704 HOH HOH . L 5 HOH A 6 706 706 HOH HOH . L 5 HOH A 7 708 708 HOH HOH . L 5 HOH A 8 709 709 HOH HOH . L 5 HOH A 9 710 710 HOH HOH . L 5 HOH A 10 711 711 HOH HOH . L 5 HOH A 11 712 712 HOH HOH . L 5 HOH A 12 713 713 HOH HOH . L 5 HOH A 13 715 715 HOH HOH . L 5 HOH A 14 716 716 HOH HOH . L 5 HOH A 15 717 717 HOH HOH . L 5 HOH A 16 718 718 HOH HOH . L 5 HOH A 17 720 720 HOH HOH . L 5 HOH A 18 722 722 HOH HOH . L 5 HOH A 19 724 724 HOH HOH . L 5 HOH A 20 725 725 HOH HOH . L 5 HOH A 21 729 729 HOH HOH . L 5 HOH A 22 732 732 HOH HOH . L 5 HOH A 23 736 736 HOH HOH . L 5 HOH A 24 737 737 HOH HOH . L 5 HOH A 25 739 739 HOH HOH . L 5 HOH A 26 740 740 HOH HOH . L 5 HOH A 27 741 741 HOH HOH . L 5 HOH A 28 744 744 HOH HOH . L 5 HOH A 29 745 745 HOH HOH . L 5 HOH A 30 746 746 HOH HOH . L 5 HOH A 31 749 749 HOH HOH . L 5 HOH A 32 751 751 HOH HOH . L 5 HOH A 33 755 755 HOH HOH . L 5 HOH A 34 758 758 HOH HOH . L 5 HOH A 35 762 762 HOH HOH . L 5 HOH A 36 763 763 HOH HOH . L 5 HOH A 37 764 764 HOH HOH . L 5 HOH A 38 769 769 HOH HOH . L 5 HOH A 39 770 770 HOH HOH . L 5 HOH A 40 775 775 HOH HOH . L 5 HOH A 41 776 776 HOH HOH . L 5 HOH A 42 777 777 HOH HOH . L 5 HOH A 43 778 778 HOH HOH . L 5 HOH A 44 779 779 HOH HOH . L 5 HOH A 45 780 780 HOH HOH . L 5 HOH A 46 781 781 HOH HOH . L 5 HOH A 47 782 782 HOH HOH . L 5 HOH A 48 783 783 HOH HOH . L 5 HOH A 49 784 784 HOH HOH . L 5 HOH A 50 785 785 HOH HOH . L 5 HOH A 51 794 794 HOH HOH . L 5 HOH A 52 795 795 HOH HOH . L 5 HOH A 53 797 797 HOH HOH . L 5 HOH A 54 798 798 HOH HOH . L 5 HOH A 55 799 799 HOH HOH . L 5 HOH A 56 801 801 HOH HOH . L 5 HOH A 57 805 805 HOH HOH . L 5 HOH A 58 810 810 HOH HOH . M 5 HOH B 1 705 705 HOH HOH . M 5 HOH B 2 707 707 HOH HOH . M 5 HOH B 3 714 714 HOH HOH . M 5 HOH B 4 719 719 HOH HOH . M 5 HOH B 5 721 721 HOH HOH . M 5 HOH B 6 723 723 HOH HOH . M 5 HOH B 7 726 726 HOH HOH . M 5 HOH B 8 727 727 HOH HOH . M 5 HOH B 9 728 728 HOH HOH . M 5 HOH B 10 730 730 HOH HOH . M 5 HOH B 11 731 731 HOH HOH . M 5 HOH B 12 733 733 HOH HOH . M 5 HOH B 13 734 734 HOH HOH . M 5 HOH B 14 735 735 HOH HOH . M 5 HOH B 15 738 738 HOH HOH . M 5 HOH B 16 742 742 HOH HOH . M 5 HOH B 17 743 743 HOH HOH . M 5 HOH B 18 747 747 HOH HOH . M 5 HOH B 19 748 748 HOH HOH . M 5 HOH B 20 750 750 HOH HOH . M 5 HOH B 21 752 752 HOH HOH . M 5 HOH B 22 753 753 HOH HOH . M 5 HOH B 23 754 754 HOH HOH . M 5 HOH B 24 756 756 HOH HOH . M 5 HOH B 25 757 757 HOH HOH . M 5 HOH B 26 759 759 HOH HOH . M 5 HOH B 27 760 760 HOH HOH . M 5 HOH B 28 761 761 HOH HOH . M 5 HOH B 29 765 765 HOH HOH . M 5 HOH B 30 766 766 HOH HOH . M 5 HOH B 31 767 767 HOH HOH . M 5 HOH B 32 768 768 HOH HOH . M 5 HOH B 33 771 771 HOH HOH . M 5 HOH B 34 772 772 HOH HOH . M 5 HOH B 35 773 773 HOH HOH . M 5 HOH B 36 774 774 HOH HOH . M 5 HOH B 37 786 786 HOH HOH . M 5 HOH B 38 787 787 HOH HOH . M 5 HOH B 39 788 788 HOH HOH . M 5 HOH B 40 789 789 HOH HOH . M 5 HOH B 41 790 790 HOH HOH . M 5 HOH B 42 791 791 HOH HOH . M 5 HOH B 43 792 792 HOH HOH . M 5 HOH B 44 793 793 HOH HOH . M 5 HOH B 45 796 796 HOH HOH . M 5 HOH B 46 800 800 HOH HOH . M 5 HOH B 47 802 802 HOH HOH . M 5 HOH B 48 803 803 HOH HOH . M 5 HOH B 49 804 804 HOH HOH . M 5 HOH B 50 806 806 HOH HOH . M 5 HOH B 51 807 807 HOH HOH . M 5 HOH B 52 808 808 HOH HOH . M 5 HOH B 53 809 809 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 2 _atom_site.Cartn_x -27.661 _atom_site.Cartn_y 53.844 _atom_site.Cartn_z -73.307 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 55 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 1603 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #