data_2ONH
#
_model_server_result.job_id            GExmc9uLCF49UWs8a0w58A 
_model_server_result.datetime_utc      '2024-11-13 19:25:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2onh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":600}' 
#
_entry.id    2ONH 
#
_exptl.entry_id    2ONH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              336.231 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(1S)-1-[(1S)-1-FLUOROETHYL]-1,5-DIMETHYLHEXYL TRIHYDROGEN DIPHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2ONH 
_cell.length_a            198.66 
_cell.length_b            198.66 
_cell.length_c            122.67 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ONH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        79 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 296 A ASP 352 1_555 C MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? 
metalc ? metalc2 A OD1 ASP 300 A ASP 356 1_555 D MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc3 F O3B F3P . A F3P 600 1_555 C MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? 
metalc ? metalc4 F O1A F3P . A F3P 600 1_555 E MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc5 F O2B F3P . A F3P 600 1_555 E MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc6 B OD1 ASP 300 B ASP 356 1_555 I MN MN . B MN 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc7 K O3B F3P . B F3P 1600 1_555 I MN MN . B MN 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? 
metalc ? metalc8 K O2B F3P . B F3P 1600 1_555 J MN MN . B MN 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? 
#
_chem_comp.formula           'C10 H23 F O7 P2' 
_chem_comp.formula_weight    336.231 
_chem_comp.id                F3P 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(1S)-1-[(1S)-1-FLUOROETHYL]-1,5-DIMETHYLHEXYL TRIHYDROGEN DIPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '2-FLUOROLINALYL DIPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 F3P sing 115 n n 
C1 H11 F3P sing 116 n n 
C1 H12 F3P sing 117 n n 
C1 H13 F3P sing 118 n n 
C2 F F3P sing 119 n n 
C2 C3 F3P sing 120 n n 
C2 H2 F3P sing 121 n n 
C3 C4 F3P sing 122 n n 
C3 C10 F3P sing 123 n n 
C3 O1 F3P sing 124 n n 
C4 C5 F3P sing 125 n n 
C4 H41 F3P sing 126 n n 
C4 H42 F3P sing 127 n n 
C5 C6 F3P sing 128 n n 
C5 H51 F3P sing 129 n n 
C5 H52 F3P sing 130 n n 
C6 C7 F3P sing 131 n n 
C6 H61 F3P sing 132 n n 
C6 H62 F3P sing 133 n n 
C7 C8 F3P sing 134 n n 
C7 C9 F3P sing 135 n n 
C7 H7 F3P sing 136 n n 
C8 H81 F3P sing 137 n n 
C8 H82 F3P sing 138 n n 
C8 H83 F3P sing 139 n n 
C9 H91 F3P sing 140 n n 
C9 H92 F3P sing 141 n n 
C9 H93 F3P sing 142 n n 
C10 H101 F3P sing 143 n n 
C10 H102 F3P sing 144 n n 
C10 H103 F3P sing 145 n n 
O1 PA F3P sing 146 n n 
PA O3A F3P sing 147 n n 
PA O1A F3P doub 148 n n 
PA O2A F3P sing 149 n n 
O2A HO2A F3P sing 150 n n 
O3A PB F3P sing 151 n n 
PB O1B F3P doub 152 n n 
PB O2B F3P sing 153 n n 
PB O3B F3P sing 154 n n 
O2B HO2B F3P sing 155 n n 
O3B HO3B F3P sing 156 n n 
#
_atom_sites.entry_id                     2ONH 
_atom_sites.fract_transf_matrix[1][1]    0.005034 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005034 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008152 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MN A 1 601 601 MN MN . 
D 2 MN A 1 602 602 MN MN . 
E 2 MN A 1 603 603 MN MN . 
F 3 F3P A 1 600 600 F3P F3P . 
G 4 BTB A 1 604 604 BTB BTB . 
H 2 MN B 1 1601 1601 MN MN . 
I 2 MN B 1 1602 1602 MN MN . 
J 2 MN B 1 1603 1603 MN MN . 
K 3 F3P B 1 1600 1600 F3P F3P . 
L 5 HOH A 1 700 700 HOH HOH . 
L 5 HOH A 2 701 701 HOH HOH . 
L 5 HOH A 3 702 702 HOH HOH . 
L 5 HOH A 4 703 703 HOH HOH . 
L 5 HOH A 5 704 704 HOH HOH . 
L 5 HOH A 6 706 706 HOH HOH . 
L 5 HOH A 7 708 708 HOH HOH . 
L 5 HOH A 8 709 709 HOH HOH . 
L 5 HOH A 9 710 710 HOH HOH . 
L 5 HOH A 10 711 711 HOH HOH . 
L 5 HOH A 11 712 712 HOH HOH . 
L 5 HOH A 12 713 713 HOH HOH . 
L 5 HOH A 13 715 715 HOH HOH . 
L 5 HOH A 14 716 716 HOH HOH . 
L 5 HOH A 15 717 717 HOH HOH . 
L 5 HOH A 16 718 718 HOH HOH . 
L 5 HOH A 17 720 720 HOH HOH . 
L 5 HOH A 18 722 722 HOH HOH . 
L 5 HOH A 19 724 724 HOH HOH . 
L 5 HOH A 20 725 725 HOH HOH . 
L 5 HOH A 21 729 729 HOH HOH . 
L 5 HOH A 22 732 732 HOH HOH . 
L 5 HOH A 23 736 736 HOH HOH . 
L 5 HOH A 24 737 737 HOH HOH . 
L 5 HOH A 25 739 739 HOH HOH . 
L 5 HOH A 26 740 740 HOH HOH . 
L 5 HOH A 27 741 741 HOH HOH . 
L 5 HOH A 28 744 744 HOH HOH . 
L 5 HOH A 29 745 745 HOH HOH . 
L 5 HOH A 30 746 746 HOH HOH . 
L 5 HOH A 31 749 749 HOH HOH . 
L 5 HOH A 32 751 751 HOH HOH . 
L 5 HOH A 33 755 755 HOH HOH . 
L 5 HOH A 34 758 758 HOH HOH . 
L 5 HOH A 35 762 762 HOH HOH . 
L 5 HOH A 36 763 763 HOH HOH . 
L 5 HOH A 37 764 764 HOH HOH . 
L 5 HOH A 38 769 769 HOH HOH . 
L 5 HOH A 39 770 770 HOH HOH . 
L 5 HOH A 40 775 775 HOH HOH . 
L 5 HOH A 41 776 776 HOH HOH . 
L 5 HOH A 42 777 777 HOH HOH . 
L 5 HOH A 43 778 778 HOH HOH . 
L 5 HOH A 44 779 779 HOH HOH . 
L 5 HOH A 45 780 780 HOH HOH . 
L 5 HOH A 46 781 781 HOH HOH . 
L 5 HOH A 47 782 782 HOH HOH . 
L 5 HOH A 48 783 783 HOH HOH . 
L 5 HOH A 49 784 784 HOH HOH . 
L 5 HOH A 50 785 785 HOH HOH . 
L 5 HOH A 51 794 794 HOH HOH . 
L 5 HOH A 52 795 795 HOH HOH . 
L 5 HOH A 53 797 797 HOH HOH . 
L 5 HOH A 54 798 798 HOH HOH . 
L 5 HOH A 55 799 799 HOH HOH . 
L 5 HOH A 56 801 801 HOH HOH . 
L 5 HOH A 57 805 805 HOH HOH . 
L 5 HOH A 58 810 810 HOH HOH . 
M 5 HOH B 1 705 705 HOH HOH . 
M 5 HOH B 2 707 707 HOH HOH . 
M 5 HOH B 3 714 714 HOH HOH . 
M 5 HOH B 4 719 719 HOH HOH . 
M 5 HOH B 5 721 721 HOH HOH . 
M 5 HOH B 6 723 723 HOH HOH . 
M 5 HOH B 7 726 726 HOH HOH . 
M 5 HOH B 8 727 727 HOH HOH . 
M 5 HOH B 9 728 728 HOH HOH . 
M 5 HOH B 10 730 730 HOH HOH . 
M 5 HOH B 11 731 731 HOH HOH . 
M 5 HOH B 12 733 733 HOH HOH . 
M 5 HOH B 13 734 734 HOH HOH . 
M 5 HOH B 14 735 735 HOH HOH . 
M 5 HOH B 15 738 738 HOH HOH . 
M 5 HOH B 16 742 742 HOH HOH . 
M 5 HOH B 17 743 743 HOH HOH . 
M 5 HOH B 18 747 747 HOH HOH . 
M 5 HOH B 19 748 748 HOH HOH . 
M 5 HOH B 20 750 750 HOH HOH . 
M 5 HOH B 21 752 752 HOH HOH . 
M 5 HOH B 22 753 753 HOH HOH . 
M 5 HOH B 23 754 754 HOH HOH . 
M 5 HOH B 24 756 756 HOH HOH . 
M 5 HOH B 25 757 757 HOH HOH . 
M 5 HOH B 26 759 759 HOH HOH . 
M 5 HOH B 27 760 760 HOH HOH . 
M 5 HOH B 28 761 761 HOH HOH . 
M 5 HOH B 29 765 765 HOH HOH . 
M 5 HOH B 30 766 766 HOH HOH . 
M 5 HOH B 31 767 767 HOH HOH . 
M 5 HOH B 32 768 768 HOH HOH . 
M 5 HOH B 33 771 771 HOH HOH . 
M 5 HOH B 34 772 772 HOH HOH . 
M 5 HOH B 35 773 773 HOH HOH . 
M 5 HOH B 36 774 774 HOH HOH . 
M 5 HOH B 37 786 786 HOH HOH . 
M 5 HOH B 38 787 787 HOH HOH . 
M 5 HOH B 39 788 788 HOH HOH . 
M 5 HOH B 40 789 789 HOH HOH . 
M 5 HOH B 41 790 790 HOH HOH . 
M 5 HOH B 42 791 791 HOH HOH . 
M 5 HOH B 43 792 792 HOH HOH . 
M 5 HOH B 44 793 793 HOH HOH . 
M 5 HOH B 45 796 796 HOH HOH . 
M 5 HOH B 46 800 800 HOH HOH . 
M 5 HOH B 47 802 802 HOH HOH . 
M 5 HOH B 48 803 803 HOH HOH . 
M 5 HOH B 49 804 804 HOH HOH . 
M 5 HOH B 50 806 806 HOH HOH . 
M 5 HOH B 51 807 807 HOH HOH . 
M 5 HOH B 52 808 808 HOH HOH . 
M 5 HOH B 53 809 809 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 F3P . . . F 3 21.332 57.1 -52.882 1 60.19 ? C1 F3P 600 A 1 
HETATM 2 C C2 F3P . . . F 3 22.726 57.191 -52.696 1 56.42 ? C2 F3P 600 A 1 
HETATM 3 C C3 F3P . . . F 3 23.421 55.787 -52.441 1 55.32 ? C3 F3P 600 A 1 
HETATM 4 C C4 F3P . . . F 3 22.534 54.651 -53.054 1 49.47 ? C4 F3P 600 A 1 
HETATM 5 C C5 F3P . . . F 3 22.536 54.622 -54.584 1 46.29 ? C5 F3P 600 A 1 
HETATM 6 C C6 F3P . . . F 3 21.514 55.578 -55.149 1 46.29 ? C6 F3P 600 A 1 
HETATM 7 C C7 F3P . . . F 3 21.75 56.854 -55.644 1 45.52 ? C7 F3P 600 A 1 
HETATM 8 C C8 F3P . . . F 3 20.571 57.67 -56.182 1 46.22 ? C8 F3P 600 A 1 
HETATM 9 C C9 F3P . . . F 3 23.071 57.408 -55.673 1 48.91 ? C9 F3P 600 A 1 
HETATM 10 C C10 F3P . . . F 3 24.715 55.815 -53.031 1 55.64 ? C10 F3P 600 A 1 
HETATM 11 F F F3P . . . F 3 23.448 58.345 -52.726 1 61 ? F F3P 600 A 1 
HETATM 12 O O1 F3P . . . F 3 23.41 55.621 -51.015 1 61.6 ? O1 F3P 600 A 1 
HETATM 13 P PA F3P . . . F 3 24.196 54.476 -50.19 1 67.48 ? PA F3P 600 A 1 
HETATM 14 O O1A F3P . . . F 3 25.765 54.619 -50.576 1 62.52 ? O1A F3P 600 A 1 
HETATM 15 O O2A F3P . . . F 3 23.974 54.577 -48.73 1 60.34 ? O2A F3P 600 A 1 
HETATM 16 O O3A F3P . . . F 3 23.729 53.049 -50.778 1 64.18 ? O3A F3P 600 A 1 
HETATM 17 P PB F3P . . . F 3 24.605 51.711 -50.577 1 58.79 ? PB F3P 600 A 1 
HETATM 18 O O2B F3P . . . F 3 26.092 52.184 -50.157 1 49.19 ? O2B F3P 600 A 1 
HETATM 19 O O3B F3P . . . F 3 23.967 50.94 -49.289 1 55.87 ? O3B F3P 600 A 1 
HETATM 20 O O1B F3P . . . F 3 24.58 50.857 -51.789 1 55.68 ? O1B F3P 600 A 1 
#
_model_server_stats.io_time_ms              67 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    43 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           20 
#