data_2OOH # _model_server_result.job_id DLwP7yu2-HYSBQtl2i2Jmw _model_server_result.datetime_utc '2024-11-19 08:31:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ooh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":701}' # _entry.id 2OOH # _exptl.entry_id 2OOH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2OOH _cell.length_a 95.595 _cell.length_b 95.595 _cell.length_c 103.092 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OOH _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 N N N ? 4 O N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2OOH _atom_sites.fract_transf_matrix[1][1] 0.01046 _atom_sites.fract_transf_matrix[1][2] 0.006039 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012078 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0097 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 901 901 SO4 SO4 . E 2 SO4 A 1 905 905 SO4 SO4 . F 2 SO4 A 1 906 906 SO4 SO4 . G 2 SO4 A 1 907 907 SO4 SO4 . H 2 SO4 A 1 908 908 SO4 SO4 . I 2 SO4 B 1 902 902 SO4 SO4 . J 2 SO4 B 1 904 904 SO4 SO4 . K 3 OX3 B 1 200 200 OX3 OX3 . L 2 SO4 C 1 903 903 SO4 SO4 . M 3 OX3 C 1 200 200 OX3 OX3 . N 4 GOL C 1 701 701 GOL GOL . O 4 GOL C 1 702 702 GOL GOL . P 5 HOH A 1 201 201 HOH HOH . P 5 HOH A 2 202 202 HOH HOH . P 5 HOH A 3 206 206 HOH HOH . P 5 HOH A 4 207 207 HOH HOH . P 5 HOH A 5 210 210 HOH HOH . P 5 HOH A 6 212 212 HOH HOH . P 5 HOH A 7 214 214 HOH HOH . P 5 HOH A 8 217 217 HOH HOH . P 5 HOH A 9 219 219 HOH HOH . P 5 HOH A 10 223 223 HOH HOH . P 5 HOH A 11 224 224 HOH HOH . P 5 HOH A 12 226 226 HOH HOH . P 5 HOH A 13 228 228 HOH HOH . P 5 HOH A 14 230 230 HOH HOH . P 5 HOH A 15 231 231 HOH HOH . P 5 HOH A 16 232 232 HOH HOH . P 5 HOH A 17 233 233 HOH HOH . P 5 HOH A 18 235 235 HOH HOH . P 5 HOH A 19 238 238 HOH HOH . P 5 HOH A 20 240 240 HOH HOH . P 5 HOH A 21 242 242 HOH HOH . P 5 HOH A 22 243 243 HOH HOH . P 5 HOH A 23 244 244 HOH HOH . P 5 HOH A 24 246 246 HOH HOH . P 5 HOH A 25 247 247 HOH HOH . P 5 HOH A 26 249 249 HOH HOH . P 5 HOH A 27 251 251 HOH HOH . P 5 HOH A 28 253 253 HOH HOH . P 5 HOH A 29 255 255 HOH HOH . P 5 HOH A 30 256 256 HOH HOH . P 5 HOH A 31 260 260 HOH HOH . P 5 HOH A 32 262 262 HOH HOH . P 5 HOH A 33 268 268 HOH HOH . P 5 HOH A 34 269 269 HOH HOH . P 5 HOH A 35 271 271 HOH HOH . P 5 HOH A 36 277 277 HOH HOH . P 5 HOH A 37 278 278 HOH HOH . P 5 HOH A 38 280 280 HOH HOH . P 5 HOH A 39 282 282 HOH HOH . P 5 HOH A 40 285 285 HOH HOH . P 5 HOH A 41 291 291 HOH HOH . P 5 HOH A 42 295 295 HOH HOH . P 5 HOH A 43 296 296 HOH HOH . P 5 HOH A 44 297 297 HOH HOH . P 5 HOH A 45 298 298 HOH HOH . P 5 HOH A 46 299 299 HOH HOH . P 5 HOH A 47 304 304 HOH HOH . P 5 HOH A 48 309 309 HOH HOH . P 5 HOH A 49 316 316 HOH HOH . P 5 HOH A 50 319 319 HOH HOH . P 5 HOH A 51 323 323 HOH HOH . P 5 HOH A 52 324 324 HOH HOH . P 5 HOH A 53 327 327 HOH HOH . P 5 HOH A 54 331 331 HOH HOH . P 5 HOH A 55 336 336 HOH HOH . P 5 HOH A 56 337 337 HOH HOH . P 5 HOH A 57 338 338 HOH HOH . P 5 HOH A 58 341 341 HOH HOH . P 5 HOH A 59 345 345 HOH HOH . P 5 HOH A 60 348 348 HOH HOH . P 5 HOH A 61 349 349 HOH HOH . P 5 HOH A 62 350 350 HOH HOH . P 5 HOH A 63 352 352 HOH HOH . P 5 HOH A 64 355 355 HOH HOH . P 5 HOH A 65 356 356 HOH HOH . P 5 HOH A 66 362 362 HOH HOH . P 5 HOH A 67 363 363 HOH HOH . P 5 HOH A 68 364 364 HOH HOH . P 5 HOH A 69 366 366 HOH HOH . P 5 HOH A 70 370 370 HOH HOH . P 5 HOH A 71 371 371 HOH HOH . P 5 HOH A 72 376 376 HOH HOH . P 5 HOH A 73 378 378 HOH HOH . P 5 HOH A 74 382 382 HOH HOH . P 5 HOH A 75 387 387 HOH HOH . P 5 HOH A 76 398 398 HOH HOH . P 5 HOH A 77 400 400 HOH HOH . P 5 HOH A 78 402 402 HOH HOH . P 5 HOH A 79 403 403 HOH HOH . P 5 HOH A 80 405 405 HOH HOH . P 5 HOH A 81 410 410 HOH HOH . P 5 HOH A 82 413 413 HOH HOH . P 5 HOH A 83 415 415 HOH HOH . P 5 HOH A 84 419 419 HOH HOH . P 5 HOH A 85 422 422 HOH HOH . P 5 HOH A 86 424 424 HOH HOH . P 5 HOH A 87 428 428 HOH HOH . P 5 HOH A 88 432 432 HOH HOH . P 5 HOH A 89 437 437 HOH HOH . P 5 HOH A 90 441 441 HOH HOH . P 5 HOH A 91 443 443 HOH HOH . P 5 HOH A 92 445 445 HOH HOH . P 5 HOH A 93 447 447 HOH HOH . P 5 HOH A 94 451 451 HOH HOH . P 5 HOH A 95 457 457 HOH HOH . P 5 HOH A 96 459 459 HOH HOH . P 5 HOH A 97 461 461 HOH HOH . P 5 HOH A 98 462 462 HOH HOH . P 5 HOH A 99 463 463 HOH HOH . P 5 HOH A 100 467 467 HOH HOH . P 5 HOH A 101 487 487 HOH HOH . P 5 HOH A 102 491 491 HOH HOH . P 5 HOH A 103 495 495 HOH HOH . P 5 HOH A 104 499 499 HOH HOH . P 5 HOH A 105 504 504 HOH HOH . Q 5 HOH B 1 205 205 HOH HOH . Q 5 HOH B 2 208 208 HOH HOH . Q 5 HOH B 3 209 209 HOH HOH . Q 5 HOH B 4 211 211 HOH HOH . Q 5 HOH B 5 213 213 HOH HOH . Q 5 HOH B 6 218 218 HOH HOH . Q 5 HOH B 7 220 220 HOH HOH . Q 5 HOH B 8 225 225 HOH HOH . Q 5 HOH B 9 234 234 HOH HOH . Q 5 HOH B 10 239 239 HOH HOH . Q 5 HOH B 11 245 245 HOH HOH . Q 5 HOH B 12 248 248 HOH HOH . Q 5 HOH B 13 252 252 HOH HOH . Q 5 HOH B 14 254 254 HOH HOH . Q 5 HOH B 15 257 257 HOH HOH . Q 5 HOH B 16 258 258 HOH HOH . Q 5 HOH B 17 259 259 HOH HOH . Q 5 HOH B 18 261 261 HOH HOH . Q 5 HOH B 19 263 263 HOH HOH . Q 5 HOH B 20 265 265 HOH HOH . Q 5 HOH B 21 270 270 HOH HOH . Q 5 HOH B 22 275 275 HOH HOH . Q 5 HOH B 23 276 276 HOH HOH . Q 5 HOH B 24 281 281 HOH HOH . Q 5 HOH B 25 283 283 HOH HOH . Q 5 HOH B 26 286 286 HOH HOH . Q 5 HOH B 27 287 287 HOH HOH . Q 5 HOH B 28 288 288 HOH HOH . Q 5 HOH B 29 293 293 HOH HOH . Q 5 HOH B 30 300 300 HOH HOH . Q 5 HOH B 31 303 303 HOH HOH . Q 5 HOH B 32 305 305 HOH HOH . Q 5 HOH B 33 306 306 HOH HOH . Q 5 HOH B 34 307 307 HOH HOH . Q 5 HOH B 35 308 308 HOH HOH . Q 5 HOH B 36 310 310 HOH HOH . Q 5 HOH B 37 313 313 HOH HOH . Q 5 HOH B 38 315 315 HOH HOH . Q 5 HOH B 39 317 317 HOH HOH . Q 5 HOH B 40 318 318 HOH HOH . Q 5 HOH B 41 320 320 HOH HOH . Q 5 HOH B 42 321 321 HOH HOH . Q 5 HOH B 43 322 322 HOH HOH . Q 5 HOH B 44 325 325 HOH HOH . Q 5 HOH B 45 328 328 HOH HOH . Q 5 HOH B 46 329 329 HOH HOH . Q 5 HOH B 47 332 332 HOH HOH . Q 5 HOH B 48 333 333 HOH HOH . Q 5 HOH B 49 335 335 HOH HOH . Q 5 HOH B 50 340 340 HOH HOH . Q 5 HOH B 51 342 342 HOH HOH . Q 5 HOH B 52 343 343 HOH HOH . Q 5 HOH B 53 346 346 HOH HOH . Q 5 HOH B 54 351 351 HOH HOH . Q 5 HOH B 55 353 353 HOH HOH . Q 5 HOH B 56 357 357 HOH HOH . Q 5 HOH B 57 358 358 HOH HOH . Q 5 HOH B 58 359 359 HOH HOH . Q 5 HOH B 59 360 360 HOH HOH . Q 5 HOH B 60 367 367 HOH HOH . Q 5 HOH B 61 368 368 HOH HOH . Q 5 HOH B 62 373 373 HOH HOH . Q 5 HOH B 63 374 374 HOH HOH . Q 5 HOH B 64 377 377 HOH HOH . Q 5 HOH B 65 380 380 HOH HOH . Q 5 HOH B 66 385 385 HOH HOH . Q 5 HOH B 67 388 388 HOH HOH . Q 5 HOH B 68 390 390 HOH HOH . Q 5 HOH B 69 393 393 HOH HOH . Q 5 HOH B 70 395 395 HOH HOH . Q 5 HOH B 71 396 396 HOH HOH . Q 5 HOH B 72 399 399 HOH HOH . Q 5 HOH B 73 401 401 HOH HOH . Q 5 HOH B 74 407 407 HOH HOH . Q 5 HOH B 75 411 411 HOH HOH . Q 5 HOH B 76 414 414 HOH HOH . Q 5 HOH B 77 416 416 HOH HOH . Q 5 HOH B 78 418 418 HOH HOH . Q 5 HOH B 79 426 426 HOH HOH . Q 5 HOH B 80 427 427 HOH HOH . Q 5 HOH B 81 429 429 HOH HOH . Q 5 HOH B 82 434 434 HOH HOH . Q 5 HOH B 83 435 435 HOH HOH . Q 5 HOH B 84 442 442 HOH HOH . Q 5 HOH B 85 444 444 HOH HOH . Q 5 HOH B 86 450 450 HOH HOH . Q 5 HOH B 87 458 458 HOH HOH . Q 5 HOH B 88 460 460 HOH HOH . Q 5 HOH B 89 464 464 HOH HOH . Q 5 HOH B 90 465 465 HOH HOH . Q 5 HOH B 91 466 466 HOH HOH . Q 5 HOH B 92 470 470 HOH HOH . Q 5 HOH B 93 471 471 HOH HOH . Q 5 HOH B 94 473 473 HOH HOH . Q 5 HOH B 95 474 474 HOH HOH . Q 5 HOH B 96 480 480 HOH HOH . Q 5 HOH B 97 482 482 HOH HOH . Q 5 HOH B 98 485 485 HOH HOH . Q 5 HOH B 99 486 486 HOH HOH . Q 5 HOH B 100 492 492 HOH HOH . Q 5 HOH B 101 493 493 HOH HOH . Q 5 HOH B 102 494 494 HOH HOH . R 5 HOH C 1 203 203 HOH HOH . R 5 HOH C 2 204 204 HOH HOH . R 5 HOH C 3 215 215 HOH HOH . R 5 HOH C 4 216 216 HOH HOH . R 5 HOH C 5 221 221 HOH HOH . R 5 HOH C 6 222 222 HOH HOH . R 5 HOH C 7 227 227 HOH HOH . R 5 HOH C 8 229 229 HOH HOH . R 5 HOH C 9 236 236 HOH HOH . R 5 HOH C 10 237 237 HOH HOH . R 5 HOH C 11 241 241 HOH HOH . R 5 HOH C 12 250 250 HOH HOH . R 5 HOH C 13 264 264 HOH HOH . R 5 HOH C 14 266 266 HOH HOH . R 5 HOH C 15 267 267 HOH HOH . R 5 HOH C 16 272 272 HOH HOH . R 5 HOH C 17 273 273 HOH HOH . R 5 HOH C 18 274 274 HOH HOH . R 5 HOH C 19 279 279 HOH HOH . R 5 HOH C 20 284 284 HOH HOH . R 5 HOH C 21 289 289 HOH HOH . R 5 HOH C 22 290 290 HOH HOH . R 5 HOH C 23 292 292 HOH HOH . R 5 HOH C 24 294 294 HOH HOH . R 5 HOH C 25 301 301 HOH HOH . R 5 HOH C 26 302 302 HOH HOH . R 5 HOH C 27 311 311 HOH HOH . R 5 HOH C 28 312 312 HOH HOH . R 5 HOH C 29 314 314 HOH HOH . R 5 HOH C 30 326 326 HOH HOH . R 5 HOH C 31 330 330 HOH HOH . R 5 HOH C 32 334 334 HOH HOH . R 5 HOH C 33 339 339 HOH HOH . R 5 HOH C 34 344 344 HOH HOH . R 5 HOH C 35 347 347 HOH HOH . R 5 HOH C 36 354 354 HOH HOH . R 5 HOH C 37 361 361 HOH HOH . R 5 HOH C 38 365 365 HOH HOH . R 5 HOH C 39 369 369 HOH HOH . R 5 HOH C 40 372 372 HOH HOH . R 5 HOH C 41 375 375 HOH HOH . R 5 HOH C 42 379 379 HOH HOH . R 5 HOH C 43 381 381 HOH HOH . R 5 HOH C 44 383 383 HOH HOH . R 5 HOH C 45 384 384 HOH HOH . R 5 HOH C 46 386 386 HOH HOH . R 5 HOH C 47 389 389 HOH HOH . R 5 HOH C 48 391 391 HOH HOH . R 5 HOH C 49 392 392 HOH HOH . R 5 HOH C 50 394 394 HOH HOH . R 5 HOH C 51 397 397 HOH HOH . R 5 HOH C 52 404 404 HOH HOH . R 5 HOH C 53 406 406 HOH HOH . R 5 HOH C 54 408 408 HOH HOH . R 5 HOH C 55 409 409 HOH HOH . R 5 HOH C 56 412 412 HOH HOH . R 5 HOH C 57 417 417 HOH HOH . R 5 HOH C 58 420 420 HOH HOH . R 5 HOH C 59 421 421 HOH HOH . R 5 HOH C 60 423 423 HOH HOH . R 5 HOH C 61 425 425 HOH HOH . R 5 HOH C 62 430 430 HOH HOH . R 5 HOH C 63 431 431 HOH HOH . R 5 HOH C 64 433 433 HOH HOH . R 5 HOH C 65 436 436 HOH HOH . R 5 HOH C 66 438 438 HOH HOH . R 5 HOH C 67 439 439 HOH HOH . R 5 HOH C 68 440 440 HOH HOH . R 5 HOH C 69 446 446 HOH HOH . R 5 HOH C 70 448 448 HOH HOH . R 5 HOH C 71 449 449 HOH HOH . R 5 HOH C 72 452 452 HOH HOH . R 5 HOH C 73 453 453 HOH HOH . R 5 HOH C 74 454 454 HOH HOH . R 5 HOH C 75 455 455 HOH HOH . R 5 HOH C 76 456 456 HOH HOH . R 5 HOH C 77 468 468 HOH HOH . R 5 HOH C 78 469 469 HOH HOH . R 5 HOH C 79 472 472 HOH HOH . R 5 HOH C 80 475 475 HOH HOH . R 5 HOH C 81 476 476 HOH HOH . R 5 HOH C 82 477 477 HOH HOH . R 5 HOH C 83 478 478 HOH HOH . R 5 HOH C 84 479 479 HOH HOH . R 5 HOH C 85 481 481 HOH HOH . R 5 HOH C 86 483 483 HOH HOH . R 5 HOH C 87 484 484 HOH HOH . R 5 HOH C 88 488 488 HOH HOH . R 5 HOH C 89 489 489 HOH HOH . R 5 HOH C 90 490 490 HOH HOH . R 5 HOH C 91 496 496 HOH HOH . R 5 HOH C 92 497 497 HOH HOH . R 5 HOH C 93 498 498 HOH HOH . R 5 HOH C 94 500 500 HOH HOH . R 5 HOH C 95 501 501 HOH HOH . R 5 HOH C 96 502 502 HOH HOH . R 5 HOH C 97 503 503 HOH HOH . R 5 HOH C 98 505 505 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . B . N 4 -57.495 27.362 29.498 0.52 29.54 ? C1 GOL 701 C 1 HETATM 2 O O1 GOL . B . N 4 -57.226 28.552 28.755 0.52 27.13 ? O1 GOL 701 C 1 HETATM 3 C C2 GOL . B . N 4 -56.421 26.326 29.167 0.52 31.62 ? C2 GOL 701 C 1 HETATM 4 O O2 GOL . B . N 4 -55.225 27.016 28.797 0.52 34.83 ? O2 GOL 701 C 1 HETATM 5 C C3 GOL . B . N 4 -56.136 25.482 30.41 0.52 34.3 ? C3 GOL 701 C 1 HETATM 6 O O3 GOL . B . N 4 -54.778 25.035 30.375 0.52 38.79 ? O3 GOL 701 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 376 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #