data_2OOR # _model_server_result.job_id FFiTIzaF5EbWb4UXldU9vw _model_server_result.datetime_utc '2024-11-08 15:34:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2oor # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":400}' # _entry.id 2OOR # _exptl.entry_id 2OOR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 747.437 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2OOR _cell.length_a 72.194 _cell.length_b 74.451 _cell.length_c 204.844 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OOR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H32 N7 O17 P3' _chem_comp.formula_weight 747.437 _chem_comp.id TXP _chem_comp.mon_nstd_flag n _chem_comp.name '1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2N PN TXP sing 422 n n O2N HO2N TXP sing 423 n n PN O1N TXP doub 424 n n PN O3 TXP sing 425 n n PN "O5'A" TXP sing 426 n n "O5'A" "C5'A" TXP sing 427 n n "C5'A" "C4'A" TXP sing 428 n n "C5'A" "H5'1" TXP sing 429 n n "C5'A" "H5'2" TXP sing 430 n n "C4'A" "C3'A" TXP sing 431 n n "C4'A" "O4'A" TXP sing 432 n n "C4'A" "H4'A" TXP sing 433 n n "C3'A" "O3'A" TXP sing 434 n n "C3'A" "C2'A" TXP sing 435 n n "C3'A" "H3'A" TXP sing 436 n n "O3'A" HO3A TXP sing 437 n n "C2'A" "C1'A" TXP sing 438 n n "C2'A" "O2'A" TXP sing 439 n n "C2'A" "H2'A" TXP sing 440 n n "O2'A" HO2' TXP sing 441 n n "C1'A" "O4'A" TXP sing 442 n n "C1'A" N1N TXP sing 443 n n "C1'A" "H1'A" TXP sing 444 n n N1N C2N TXP sing 445 n n N1N C6N TXP sing 446 n n C6N C5N TXP sing 447 n n C6N H6N1 TXP sing 448 n n C6N H6N2 TXP sing 449 n n C5N C4N TXP doub 450 n n C5N H5N TXP sing 451 n n C4N C3N TXP sing 452 n n C4N H4N TXP sing 453 n n C3N C2N TXP sing 454 n n C3N H3N TXP sing 455 n n C3N C7N TXP sing 456 n n C7N N7N TXP sing 457 n n C7N O7N TXP doub 458 n n N7N H7N1 TXP sing 459 n n N7N H7N2 TXP sing 460 n n C2N H2N1 TXP sing 461 n n C2N H2N2 TXP sing 462 n n O3 PA TXP sing 463 n n PA O5' TXP sing 464 n n PA O1A TXP doub 465 n n PA O2A TXP sing 466 n n O2A HO2A TXP sing 467 n n O5' C5' TXP sing 468 n n C5' C4' TXP sing 469 n n C5' "H5'A" TXP sing 470 n n C5' "H5'B" TXP sing 471 n n C4' O4' TXP sing 472 n n C4' C3' TXP sing 473 n n C4' H4' TXP sing 474 n n C3' C2' TXP sing 475 n n C3' O3' TXP sing 476 n n C3' H3' TXP sing 477 n n O3' HO3' TXP sing 478 n n O4' C1' TXP sing 479 n n C1' N9A TXP sing 480 n n C1' C2' TXP sing 481 n n C1' H1' TXP sing 482 n n C2' O2' TXP sing 483 n n C2' H2' TXP sing 484 n n O2' P2 TXP sing 485 n n P2 OP1 TXP doub 486 n n P2 OP2 TXP sing 487 n n P2 OP3 TXP sing 488 n n OP3 HOP3 TXP sing 489 n n OP2 HOP2 TXP sing 490 n n N9A C4A TXP sing 491 n y N9A C8A TXP sing 492 n y C4A N3A TXP doub 493 n y C4A C5A TXP sing 494 n y N3A C2A TXP sing 495 n y C2A N1A TXP doub 496 n y C2A H2A TXP sing 497 n n N1A C6A TXP sing 498 n y C6A N6A TXP sing 499 n n C6A C5A TXP doub 500 n y N6A H6A1 TXP sing 501 n n N6A H6A2 TXP sing 502 n n C5A N7A TXP sing 503 n y N7A C8A TXP doub 504 n y C8A H8A TXP sing 505 n n # _atom_sites.entry_id 2OOR _atom_sites.fract_transf_matrix[1][1] 0.013852 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013432 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004882 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 NAD A 1 500 500 NAD NAD . E 3 NAD B 1 600 600 NAD NAD . F 4 GOL B 1 700 700 GOL GOL . G 5 TXP C 1 400 400 TXP TXP . H 6 HOH A 1 501 3 HOH HOH . H 6 HOH A 2 502 8 HOH HOH . H 6 HOH A 3 503 9 HOH HOH . H 6 HOH A 4 504 11 HOH HOH . H 6 HOH A 5 505 14 HOH HOH . H 6 HOH A 6 506 16 HOH HOH . H 6 HOH A 7 507 19 HOH HOH . H 6 HOH A 8 508 21 HOH HOH . H 6 HOH A 9 509 23 HOH HOH . H 6 HOH A 10 510 28 HOH HOH . H 6 HOH A 11 511 32 HOH HOH . H 6 HOH A 12 512 33 HOH HOH . H 6 HOH A 13 513 37 HOH HOH . H 6 HOH A 14 514 43 HOH HOH . H 6 HOH A 15 515 45 HOH HOH . H 6 HOH A 16 516 49 HOH HOH . H 6 HOH A 17 517 52 HOH HOH . H 6 HOH A 18 518 54 HOH HOH . H 6 HOH A 19 519 62 HOH HOH . H 6 HOH A 20 520 65 HOH HOH . H 6 HOH A 21 521 66 HOH HOH . H 6 HOH A 22 522 68 HOH HOH . H 6 HOH A 23 523 69 HOH HOH . H 6 HOH A 24 524 70 HOH HOH . H 6 HOH A 25 525 72 HOH HOH . H 6 HOH A 26 526 74 HOH HOH . H 6 HOH A 27 527 75 HOH HOH . H 6 HOH A 28 528 77 HOH HOH . H 6 HOH A 29 529 78 HOH HOH . H 6 HOH A 30 530 80 HOH HOH . H 6 HOH A 31 531 83 HOH HOH . H 6 HOH A 32 532 85 HOH HOH . H 6 HOH A 33 533 86 HOH HOH . H 6 HOH A 34 534 87 HOH HOH . H 6 HOH A 35 535 89 HOH HOH . I 6 HOH B 1 701 1 HOH HOH . I 6 HOH B 2 702 2 HOH HOH . I 6 HOH B 3 703 4 HOH HOH . I 6 HOH B 4 704 5 HOH HOH . I 6 HOH B 5 705 6 HOH HOH . I 6 HOH B 6 706 10 HOH HOH . I 6 HOH B 7 707 12 HOH HOH . I 6 HOH B 8 708 13 HOH HOH . I 6 HOH B 9 709 15 HOH HOH . I 6 HOH B 10 710 17 HOH HOH . I 6 HOH B 11 711 18 HOH HOH . I 6 HOH B 12 712 20 HOH HOH . I 6 HOH B 13 713 22 HOH HOH . I 6 HOH B 14 714 24 HOH HOH . I 6 HOH B 15 715 25 HOH HOH . I 6 HOH B 16 716 27 HOH HOH . I 6 HOH B 17 717 29 HOH HOH . I 6 HOH B 18 718 30 HOH HOH . I 6 HOH B 19 719 34 HOH HOH . I 6 HOH B 20 720 35 HOH HOH . I 6 HOH B 21 721 36 HOH HOH . I 6 HOH B 22 722 38 HOH HOH . I 6 HOH B 23 723 39 HOH HOH . I 6 HOH B 24 724 40 HOH HOH . I 6 HOH B 25 725 44 HOH HOH . I 6 HOH B 26 726 46 HOH HOH . I 6 HOH B 27 727 48 HOH HOH . I 6 HOH B 28 728 50 HOH HOH . I 6 HOH B 29 729 53 HOH HOH . I 6 HOH B 30 730 55 HOH HOH . I 6 HOH B 31 731 57 HOH HOH . I 6 HOH B 32 732 58 HOH HOH . I 6 HOH B 33 733 59 HOH HOH . I 6 HOH B 34 734 61 HOH HOH . I 6 HOH B 35 735 63 HOH HOH . I 6 HOH B 36 736 64 HOH HOH . I 6 HOH B 37 737 67 HOH HOH . I 6 HOH B 38 738 73 HOH HOH . I 6 HOH B 39 739 76 HOH HOH . I 6 HOH B 40 740 81 HOH HOH . I 6 HOH B 41 741 82 HOH HOH . I 6 HOH B 42 742 84 HOH HOH . I 6 HOH B 43 743 88 HOH HOH . I 6 HOH B 44 744 90 HOH HOH . I 6 HOH B 45 745 100 HOH HOH . J 6 HOH C 1 401 7 HOH HOH . J 6 HOH C 2 402 26 HOH HOH . J 6 HOH C 3 403 31 HOH HOH . J 6 HOH C 4 404 42 HOH HOH . J 6 HOH C 5 405 47 HOH HOH . J 6 HOH C 6 406 51 HOH HOH . J 6 HOH C 7 407 56 HOH HOH . J 6 HOH C 8 408 60 HOH HOH . J 6 HOH C 9 409 71 HOH HOH . J 6 HOH C 10 410 79 HOH HOH . J 6 HOH C 11 411 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2N TXP . . . G 5 -25.684 -32.486 9.164 1 46.86 ? O2N TXP 400 C 1 HETATM 2 P PN TXP . . . G 5 -26.291 -33.796 8.727 1 47.96 ? PN TXP 400 C 1 HETATM 3 O O1N TXP . . . G 5 -27.475 -33.737 7.794 1 47.77 ? O1N TXP 400 C 1 HETATM 4 O "O5'A" TXP . . . G 5 -26.755 -34.62 10.03 1 46.46 ? "O5'A" TXP 400 C 1 HETATM 5 C "C5'A" TXP . . . G 5 -25.817 -34.956 11.047 1 47.21 ? "C5'A" TXP 400 C 1 HETATM 6 C "C4'A" TXP . . . G 5 -26.035 -36.36 11.587 1 46.89 ? "C4'A" TXP 400 C 1 HETATM 7 C "C3'A" TXP . . . G 5 -27.374 -36.575 12.283 1 47.75 ? "C3'A" TXP 400 C 1 HETATM 8 O "O3'A" TXP . . . G 5 -27.888 -37.874 11.958 1 48.33 ? "O3'A" TXP 400 C 1 HETATM 9 C "C2'A" TXP . . . G 5 -27.057 -36.491 13.762 1 47.45 ? "C2'A" TXP 400 C 1 HETATM 10 O "O2'A" TXP . . . G 5 -27.936 -37.288 14.562 1 46.9 ? "O2'A" TXP 400 C 1 HETATM 11 C "C1'A" TXP . . . G 5 -25.609 -36.998 13.802 1 47.1 ? "C1'A" TXP 400 C 1 HETATM 12 N N1N TXP . . . G 5 -24.856 -36.498 14.963 1 45.89 ? N1N TXP 400 C 1 HETATM 13 C C6N TXP . . . G 5 -24.313 -37.569 15.804 1 45.4 ? C6N TXP 400 C 1 HETATM 14 C C5N TXP . . . G 5 -23.159 -37.015 16.63 1 44.99 ? C5N TXP 400 C 1 HETATM 15 C C4N TXP . . . G 5 -23.559 -35.73 17.343 1 44.36 ? C4N TXP 400 C 1 HETATM 16 C C3N TXP . . . G 5 -24.193 -34.782 16.352 1 44.32 ? C3N TXP 400 C 1 HETATM 17 C C7N TXP . . . G 5 -24.259 -33.357 16.692 1 42.7 ? C7N TXP 400 C 1 HETATM 18 O O7N TXP . . . G 5 -24.029 -32.967 17.936 1 43.17 ? O7N TXP 400 C 1 HETATM 19 N N7N TXP . . . G 5 -24.552 -32.451 15.762 1 42.24 ? N7N TXP 400 C 1 HETATM 20 C C2N TXP . . . G 5 -24.727 -35.254 15.207 1 45.26 ? C2N TXP 400 C 1 HETATM 21 O "O4'A" TXP . . . G 5 -25.017 -36.591 12.563 1 46.96 ? "O4'A" TXP 400 C 1 HETATM 22 O O3 TXP . . . G 5 -25.11 -34.726 8.094 1 48.56 ? O3 TXP 400 C 1 HETATM 23 P PA TXP . . . G 5 -25.281 -36.269 7.618 1 48.33 ? PA TXP 400 C 1 HETATM 24 O O1A TXP . . . G 5 -26.73 -36.522 7.336 1 50.81 ? O1A TXP 400 C 1 HETATM 25 O O2A TXP . . . G 5 -24.566 -37.237 8.519 1 48.21 ? O2A TXP 400 C 1 HETATM 26 O O5' TXP . . . G 5 -24.492 -36.351 6.223 1 50.63 ? O5' TXP 400 C 1 HETATM 27 C C5' TXP . . . G 5 -24.134 -35.193 5.481 1 50.94 ? C5' TXP 400 C 1 HETATM 28 C C4' TXP . . . G 5 -23.609 -35.552 4.091 1 51.24 ? C4' TXP 400 C 1 HETATM 29 C C3' TXP . . . G 5 -23.067 -36.971 3.92 1 51.81 ? C3' TXP 400 C 1 HETATM 30 O O3' TXP . . . G 5 -24.108 -37.869 3.507 1 52.52 ? O3' TXP 400 C 1 HETATM 31 O O4' TXP . . . G 5 -22.52 -34.697 3.736 1 51.11 ? O4' TXP 400 C 1 HETATM 32 C C1' TXP . . . G 5 -21.8 -35.338 2.679 1 50.02 ? C1' TXP 400 C 1 HETATM 33 C C2' TXP . . . G 5 -21.955 -36.85 2.885 1 51.38 ? C2' TXP 400 C 1 HETATM 34 O O2' TXP . . . G 5 -22.288 -37.523 1.661 1 52.24 ? O2' TXP 400 C 1 HETATM 35 P P2 TXP . . . G 5 -21.236 -37.807 0.461 1 51.93 ? P2 TXP 400 C 1 HETATM 36 O OP3 TXP . . . G 5 -20.07 -38.464 1.149 1 50.68 ? OP3 TXP 400 C 1 HETATM 37 O OP2 TXP . . . G 5 -20.971 -36.457 -0.161 1 50.48 ? OP2 TXP 400 C 1 HETATM 38 O OP1 TXP . . . G 5 -21.974 -38.75 -0.465 1 53.15 ? OP1 TXP 400 C 1 HETATM 39 N N9A TXP . . . G 5 -20.389 -34.853 2.616 1 49.34 ? N9A TXP 400 C 1 HETATM 40 C C4A TXP . . . G 5 -19.993 -33.873 1.796 1 48.63 ? C4A TXP 400 C 1 HETATM 41 N N3A TXP . . . G 5 -20.656 -33.112 0.887 1 48.68 ? N3A TXP 400 C 1 HETATM 42 C C2A TXP . . . G 5 -20.003 -32.178 0.178 1 49.33 ? C2A TXP 400 C 1 HETATM 43 N N1A TXP . . . G 5 -18.682 -31.968 0.349 1 49.09 ? N1A TXP 400 C 1 HETATM 44 C C6A TXP . . . G 5 -17.982 -32.703 1.248 1 48.89 ? C6A TXP 400 C 1 HETATM 45 N N6A TXP . . . G 5 -16.655 -32.504 1.433 1 49.37 ? N6A TXP 400 C 1 HETATM 46 C C5A TXP . . . G 5 -18.64 -33.674 1.991 1 48.62 ? C5A TXP 400 C 1 HETATM 47 N N7A TXP . . . G 5 -18.239 -34.548 2.936 1 49.37 ? N7A TXP 400 C 1 HETATM 48 C C8A TXP . . . G 5 -19.318 -35.267 3.319 1 49.15 ? C8A TXP 400 C 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 48 #