data_2OOS # _model_server_result.job_id UMXXXUXNnrrVfEw_1Oa-nA _model_server_result.datetime_utc '2024-12-27 19:36:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2oos # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":450}' # _entry.id 2OOS # _exptl.entry_id 2OOS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2OOS _cell.length_a 131.221 _cell.length_b 131.221 _cell.length_c 83.163 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OOS _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 131.221 131.221 41.5815 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 279 n n PA O2A NAD sing 280 n n PA O5B NAD sing 281 n n PA O3 NAD sing 282 n n O2A HOA2 NAD sing 283 n n O5B C5B NAD sing 284 n n C5B C4B NAD sing 285 n n C5B H51A NAD sing 286 n n C5B H52A NAD sing 287 n n C4B O4B NAD sing 288 n n C4B C3B NAD sing 289 n n C4B H4B NAD sing 290 n n O4B C1B NAD sing 291 n n C3B O3B NAD sing 292 n n C3B C2B NAD sing 293 n n C3B H3B NAD sing 294 n n O3B HO3A NAD sing 295 n n C2B O2B NAD sing 296 n n C2B C1B NAD sing 297 n n C2B H2B NAD sing 298 n n O2B HO2A NAD sing 299 n n C1B N9A NAD sing 300 n n C1B H1B NAD sing 301 n n N9A C8A NAD sing 302 n y N9A C4A NAD sing 303 n y C8A N7A NAD doub 304 n y C8A H8A NAD sing 305 n n N7A C5A NAD sing 306 n y C5A C6A NAD sing 307 n y C5A C4A NAD doub 308 n y C6A N6A NAD sing 309 n n C6A N1A NAD doub 310 n y N6A H61A NAD sing 311 n n N6A H62A NAD sing 312 n n N1A C2A NAD sing 313 n y C2A N3A NAD doub 314 n y C2A H2A NAD sing 315 n n N3A C4A NAD sing 316 n y O3 PN NAD sing 317 n n PN O1N NAD doub 318 n n PN O2N NAD sing 319 n n PN O5D NAD sing 320 n n O5D C5D NAD sing 321 n n C5D C4D NAD sing 322 n n C5D H51N NAD sing 323 n n C5D H52N NAD sing 324 n n C4D O4D NAD sing 325 n n C4D C3D NAD sing 326 n n C4D H4D NAD sing 327 n n O4D C1D NAD sing 328 n n C3D O3D NAD sing 329 n n C3D C2D NAD sing 330 n n C3D H3D NAD sing 331 n n O3D HO3N NAD sing 332 n n C2D O2D NAD sing 333 n n C2D C1D NAD sing 334 n n C2D H2D NAD sing 335 n n O2D HO2N NAD sing 336 n n C1D N1N NAD sing 337 n n C1D H1D NAD sing 338 n n N1N C2N NAD sing 339 n y N1N C6N NAD doub 340 n y C2N C3N NAD doub 341 n y C2N H2N NAD sing 342 n n C3N C7N NAD sing 343 n n C3N C4N NAD sing 344 n y C7N O7N NAD doub 345 n n C7N N7N NAD sing 346 n n N7N H71N NAD sing 347 n n N7N H72N NAD sing 348 n n C4N C5N NAD doub 349 n y C4N H4N NAD sing 350 n n C5N C6N NAD sing 351 n y C5N H5N NAD sing 352 n n C6N H6N NAD sing 353 n n # _atom_sites.entry_id 2OOS _atom_sites.fract_transf_matrix[1][1] 0.007621 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007621 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012025 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 450 450 NAD NAD . D 3 JPJ A 1 500 500 JPJ JPC . E 2 NAD B 1 450 450 NAD NAD . F 3 JPJ B 1 500 500 JPJ JPC . G 4 HOH A 1 501 501 HOH HOH . G 4 HOH A 2 503 503 HOH HOH . G 4 HOH A 3 504 504 HOH HOH . G 4 HOH A 4 509 509 HOH HOH . G 4 HOH A 5 510 510 HOH HOH . G 4 HOH A 6 513 513 HOH HOH . G 4 HOH A 7 514 514 HOH HOH . G 4 HOH A 8 515 515 HOH HOH . G 4 HOH A 9 517 517 HOH HOH . G 4 HOH A 10 519 519 HOH HOH . G 4 HOH A 11 521 521 HOH HOH . G 4 HOH A 12 523 523 HOH HOH . G 4 HOH A 13 524 524 HOH HOH . G 4 HOH A 14 526 526 HOH HOH . G 4 HOH A 15 528 528 HOH HOH . G 4 HOH A 16 529 529 HOH HOH . G 4 HOH A 17 530 530 HOH HOH . G 4 HOH A 18 532 532 HOH HOH . G 4 HOH A 19 533 533 HOH HOH . G 4 HOH A 20 534 534 HOH HOH . G 4 HOH A 21 537 537 HOH HOH . G 4 HOH A 22 539 539 HOH HOH . G 4 HOH A 23 540 540 HOH HOH . G 4 HOH A 24 541 541 HOH HOH . G 4 HOH A 25 542 542 HOH HOH . G 4 HOH A 26 543 543 HOH HOH . G 4 HOH A 27 544 544 HOH HOH . G 4 HOH A 28 546 546 HOH HOH . G 4 HOH A 29 547 547 HOH HOH . G 4 HOH A 30 549 549 HOH HOH . G 4 HOH A 31 552 552 HOH HOH . G 4 HOH A 32 555 555 HOH HOH . G 4 HOH A 33 558 558 HOH HOH . G 4 HOH A 34 566 566 HOH HOH . G 4 HOH A 35 567 567 HOH HOH . G 4 HOH A 36 569 569 HOH HOH . G 4 HOH A 37 572 572 HOH HOH . G 4 HOH A 38 573 573 HOH HOH . G 4 HOH A 39 575 575 HOH HOH . G 4 HOH A 40 576 576 HOH HOH . G 4 HOH A 41 578 578 HOH HOH . G 4 HOH A 42 579 579 HOH HOH . G 4 HOH A 43 580 580 HOH HOH . G 4 HOH A 44 582 582 HOH HOH . G 4 HOH A 45 592 592 HOH HOH . G 4 HOH A 46 593 593 HOH HOH . G 4 HOH A 47 598 598 HOH HOH . G 4 HOH A 48 599 599 HOH HOH . G 4 HOH A 49 600 600 HOH HOH . G 4 HOH A 50 603 603 HOH HOH . G 4 HOH A 51 604 604 HOH HOH . G 4 HOH A 52 605 605 HOH HOH . G 4 HOH A 53 606 606 HOH HOH . G 4 HOH A 54 607 607 HOH HOH . G 4 HOH A 55 608 608 HOH HOH . G 4 HOH A 56 609 609 HOH HOH . G 4 HOH A 57 610 610 HOH HOH . G 4 HOH A 58 611 611 HOH HOH . G 4 HOH A 59 615 615 HOH HOH . G 4 HOH A 60 626 626 HOH HOH . G 4 HOH A 61 627 627 HOH HOH . G 4 HOH A 62 628 628 HOH HOH . G 4 HOH A 63 631 631 HOH HOH . G 4 HOH A 64 632 632 HOH HOH . G 4 HOH A 65 633 633 HOH HOH . G 4 HOH A 66 634 634 HOH HOH . G 4 HOH A 67 635 635 HOH HOH . G 4 HOH A 68 637 637 HOH HOH . G 4 HOH A 69 640 640 HOH HOH . G 4 HOH A 70 641 641 HOH HOH . G 4 HOH A 71 642 642 HOH HOH . G 4 HOH A 72 643 643 HOH HOH . G 4 HOH A 73 644 644 HOH HOH . G 4 HOH A 74 645 645 HOH HOH . G 4 HOH A 75 646 646 HOH HOH . G 4 HOH A 76 647 647 HOH HOH . G 4 HOH A 77 648 648 HOH HOH . G 4 HOH A 78 649 649 HOH HOH . G 4 HOH A 79 650 650 HOH HOH . G 4 HOH A 80 651 651 HOH HOH . G 4 HOH A 81 652 652 HOH HOH . G 4 HOH A 82 654 654 HOH HOH . G 4 HOH A 83 681 681 HOH HOH . G 4 HOH A 84 682 682 HOH HOH . G 4 HOH A 85 687 687 HOH HOH . G 4 HOH A 86 689 689 HOH HOH . H 4 HOH B 1 502 502 HOH HOH . H 4 HOH B 2 505 505 HOH HOH . H 4 HOH B 3 508 508 HOH HOH . H 4 HOH B 4 511 511 HOH HOH . H 4 HOH B 5 512 512 HOH HOH . H 4 HOH B 6 516 516 HOH HOH . H 4 HOH B 7 518 518 HOH HOH . H 4 HOH B 8 520 520 HOH HOH . H 4 HOH B 9 522 522 HOH HOH . H 4 HOH B 10 525 525 HOH HOH . H 4 HOH B 11 527 527 HOH HOH . H 4 HOH B 12 531 531 HOH HOH . H 4 HOH B 13 535 535 HOH HOH . H 4 HOH B 14 536 536 HOH HOH . H 4 HOH B 15 538 538 HOH HOH . H 4 HOH B 16 548 548 HOH HOH . H 4 HOH B 17 550 550 HOH HOH . H 4 HOH B 18 551 551 HOH HOH . H 4 HOH B 19 553 553 HOH HOH . H 4 HOH B 20 554 554 HOH HOH . H 4 HOH B 21 556 556 HOH HOH . H 4 HOH B 22 557 557 HOH HOH . H 4 HOH B 23 559 559 HOH HOH . H 4 HOH B 24 560 560 HOH HOH . H 4 HOH B 25 561 561 HOH HOH . H 4 HOH B 26 562 562 HOH HOH . H 4 HOH B 27 563 563 HOH HOH . H 4 HOH B 28 564 564 HOH HOH . H 4 HOH B 29 565 565 HOH HOH . H 4 HOH B 30 568 568 HOH HOH . H 4 HOH B 31 570 570 HOH HOH . H 4 HOH B 32 574 574 HOH HOH . H 4 HOH B 33 577 577 HOH HOH . H 4 HOH B 34 581 581 HOH HOH . H 4 HOH B 35 583 583 HOH HOH . H 4 HOH B 36 584 584 HOH HOH . H 4 HOH B 37 585 585 HOH HOH . H 4 HOH B 38 586 586 HOH HOH . H 4 HOH B 39 587 587 HOH HOH . H 4 HOH B 40 588 588 HOH HOH . H 4 HOH B 41 589 589 HOH HOH . H 4 HOH B 42 590 590 HOH HOH . H 4 HOH B 43 591 591 HOH HOH . H 4 HOH B 44 595 595 HOH HOH . H 4 HOH B 45 596 596 HOH HOH . H 4 HOH B 46 601 601 HOH HOH . H 4 HOH B 47 602 602 HOH HOH . H 4 HOH B 48 614 614 HOH HOH . H 4 HOH B 49 616 616 HOH HOH . H 4 HOH B 50 617 617 HOH HOH . H 4 HOH B 51 618 618 HOH HOH . H 4 HOH B 52 619 619 HOH HOH . H 4 HOH B 53 620 620 HOH HOH . H 4 HOH B 54 621 621 HOH HOH . H 4 HOH B 55 622 622 HOH HOH . H 4 HOH B 56 623 623 HOH HOH . H 4 HOH B 57 624 624 HOH HOH . H 4 HOH B 58 629 629 HOH HOH . H 4 HOH B 59 636 636 HOH HOH . H 4 HOH B 60 638 638 HOH HOH . H 4 HOH B 61 639 639 HOH HOH . H 4 HOH B 62 653 653 HOH HOH . H 4 HOH B 63 655 655 HOH HOH . H 4 HOH B 64 656 656 HOH HOH . H 4 HOH B 65 657 657 HOH HOH . H 4 HOH B 66 658 658 HOH HOH . H 4 HOH B 67 659 659 HOH HOH . H 4 HOH B 68 660 660 HOH HOH . H 4 HOH B 69 661 661 HOH HOH . H 4 HOH B 70 662 662 HOH HOH . H 4 HOH B 71 663 663 HOH HOH . H 4 HOH B 72 664 664 HOH HOH . H 4 HOH B 73 665 665 HOH HOH . H 4 HOH B 74 666 666 HOH HOH . H 4 HOH B 75 667 667 HOH HOH . H 4 HOH B 76 668 668 HOH HOH . H 4 HOH B 77 669 669 HOH HOH . H 4 HOH B 78 670 670 HOH HOH . H 4 HOH B 79 671 671 HOH HOH . H 4 HOH B 80 672 672 HOH HOH . H 4 HOH B 81 673 673 HOH HOH . H 4 HOH B 82 674 674 HOH HOH . H 4 HOH B 83 675 675 HOH HOH . H 4 HOH B 84 676 676 HOH HOH . H 4 HOH B 85 677 677 HOH HOH . H 4 HOH B 86 679 679 HOH HOH . H 4 HOH B 87 683 683 HOH HOH . H 4 HOH B 88 684 684 HOH HOH . H 4 HOH B 89 685 685 HOH HOH . H 4 HOH B 90 686 686 HOH HOH . H 4 HOH B 91 688 688 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . C 2 50.882 88.61 40.683 1 39.93 ? PA NAD 450 A 1 HETATM 2 O O1A NAD . . . C 2 52.38 88.706 40.493 1 40.35 ? O1A NAD 450 A 1 HETATM 3 O O2A NAD . . . C 2 50.268 88.76 42.046 1 41.34 ? O2A NAD 450 A 1 HETATM 4 O O5B NAD . . . C 2 50.216 87.266 40.117 1 42.11 ? O5B NAD 450 A 1 HETATM 5 C C5B NAD . . . C 2 50.614 86.647 38.901 1 43.28 ? C5B NAD 450 A 1 HETATM 6 C C4B NAD . . . C 2 50.761 85.189 39.264 1 40.53 ? C4B NAD 450 A 1 HETATM 7 O O4B NAD . . . C 2 50.92 84.344 38.116 1 39.8 ? O4B NAD 450 A 1 HETATM 8 C C3B NAD . . . C 2 52.042 85.04 40.081 1 41.03 ? C3B NAD 450 A 1 HETATM 9 O O3B NAD . . . C 2 51.67 84.644 41.398 1 42.89 ? O3B NAD 450 A 1 HETATM 10 C C2B NAD . . . C 2 52.844 83.943 39.393 1 40.06 ? C2B NAD 450 A 1 HETATM 11 O O2B NAD . . . C 2 53.452 83.081 40.375 1 44.26 ? O2B NAD 450 A 1 HETATM 12 C C1B NAD . . . C 2 51.782 83.262 38.528 1 39.91 ? C1B NAD 450 A 1 HETATM 13 N N9A NAD . . . C 2 52.349 82.483 37.393 1 42.47 ? N9A NAD 450 A 1 HETATM 14 C C8A NAD . . . C 2 53.293 82.895 36.487 1 40.39 ? C8A NAD 450 A 1 HETATM 15 N N7A NAD . . . C 2 53.567 81.874 35.647 1 39.9 ? N7A NAD 450 A 1 HETATM 16 C C5A NAD . . . C 2 52.775 80.819 36.001 1 40.96 ? C5A NAD 450 A 1 HETATM 17 C C6A NAD . . . C 2 52.631 79.519 35.49 1 38.76 ? C6A NAD 450 A 1 HETATM 18 N N6A NAD . . . C 2 53.354 79.101 34.408 1 40.13 ? N6A NAD 450 A 1 HETATM 19 N N1A NAD . . . C 2 51.785 78.687 36.101 1 39.43 ? N1A NAD 450 A 1 HETATM 20 C C2A NAD . . . C 2 51.063 79.069 37.2 1 40.81 ? C2A NAD 450 A 1 HETATM 21 N N3A NAD . . . C 2 51.168 80.316 37.722 1 41.41 ? N3A NAD 450 A 1 HETATM 22 C C4A NAD . . . C 2 52.018 81.203 37.117 1 41.11 ? C4A NAD 450 A 1 HETATM 23 O O3 NAD . . . C 2 50.334 89.789 39.715 1 37.48 ? O3 NAD 450 A 1 HETATM 24 P PN NAD . . . C 2 48.839 90.29 39.474 1 35.18 ? PN NAD 450 A 1 HETATM 25 O O1N NAD . . . C 2 47.933 90.082 40.662 1 34.13 ? O1N NAD 450 A 1 HETATM 26 O O2N NAD . . . C 2 49.049 91.673 38.872 1 37.68 ? O2N NAD 450 A 1 HETATM 27 O O5D NAD . . . C 2 48.353 89.29 38.291 1 35.02 ? O5D NAD 450 A 1 HETATM 28 C C5D NAD . . . C 2 47.172 88.47 38.269 1 33.71 ? C5D NAD 450 A 1 HETATM 29 C C4D NAD . . . C 2 46.355 88.706 36.988 1 32.89 ? C4D NAD 450 A 1 HETATM 30 O O4D NAD . . . C 2 45.816 90.051 36.909 1 33.63 ? O4D NAD 450 A 1 HETATM 31 C C3D NAD . . . C 2 47.166 88.509 35.727 1 32.68 ? C3D NAD 450 A 1 HETATM 32 O O3D NAD . . . C 2 46.32 87.821 34.8 1 30.74 ? O3D NAD 450 A 1 HETATM 33 C C2D NAD . . . C 2 47.417 89.923 35.244 1 31.84 ? C2D NAD 450 A 1 HETATM 34 O O2D NAD . . . C 2 47.566 89.907 33.835 1 32.29 ? O2D NAD 450 A 1 HETATM 35 C C1D NAD . . . C 2 46.138 90.64 35.648 1 32.08 ? C1D NAD 450 A 1 HETATM 36 N N1N NAD . . . C 2 46.135 92.119 35.716 1 32.83 ? N1N NAD 450 A 1 HETATM 37 C C2N NAD . . . C 2 46.976 92.79 36.561 1 31.87 ? C2N NAD 450 A 1 HETATM 38 C C3N NAD . . . C 2 46.954 94.187 36.642 1 33.71 ? C3N NAD 450 A 1 HETATM 39 C C7N NAD . . . C 2 47.895 94.943 37.574 1 31.91 ? C7N NAD 450 A 1 HETATM 40 O O7N NAD . . . C 2 47.983 96.125 37.427 1 31.84 ? O7N NAD 450 A 1 HETATM 41 N N7N NAD . . . C 2 48.606 94.32 38.52 1 32.31 ? N7N NAD 450 A 1 HETATM 42 C C4N NAD . . . C 2 46.038 94.896 35.846 1 30.81 ? C4N NAD 450 A 1 HETATM 43 C C5N NAD . . . C 2 45.199 94.183 35.012 1 28.47 ? C5N NAD 450 A 1 HETATM 44 C C6N NAD . . . C 2 45.255 92.783 34.968 1 30.56 ? C6N NAD 450 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 44 #