data_2OOW # _model_server_result.job_id z2A2H_iyO239mXtGotKQwQ _model_server_result.datetime_utc '2024-11-24 13:40:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2oow # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":701}' # _entry.id 2OOW # _exptl.entry_id 2OOW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2OOW _cell.length_a 67.61 _cell.length_b 67.794 _cell.length_c 87.248 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OOW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 K N N ? 4 O N N ? 4 P N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 32 _struct_conn.ptnr1_auth_asym_id C _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 32 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id N _struct_conn.ptnr2_label_atom_id C5 _struct_conn.ptnr2_label_comp_id OX4 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id C _struct_conn.ptnr2_auth_comp_id OX4 _struct_conn.ptnr2_auth_seq_id 200 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id A _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.898 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2OOW _atom_sites.fract_transf_matrix[1][1] 0.014791 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014751 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011462 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 901 901 SO4 SO4 . E 2 SO4 A 1 904 904 SO4 SO4 . F 3 OX4 A 1 200 200 OX4 OX4 . G 4 GOL A 1 701 701 GOL GOL . H 4 GOL A 1 704 704 GOL GOL . I 4 GOL A 1 706 706 GOL GOL . J 2 SO4 B 1 902 902 SO4 SO4 . K 4 GOL B 1 702 702 GOL GOL . L 2 SO4 C 1 903 903 SO4 SO4 . M 2 SO4 C 1 905 905 SO4 SO4 . N 3 OX4 C 1 200 200 OX4 OX4 . O 4 GOL C 1 703 703 GOL GOL . P 4 GOL C 1 705 705 GOL GOL . Q 5 IPA C 1 801 801 IPA IPA . R 5 IPA C 1 802 802 IPA IPA . S 5 IPA C 1 803 803 IPA IPA . T 6 HOH A 1 201 201 HOH HOH . T 6 HOH A 2 203 203 HOH HOH . T 6 HOH A 3 207 207 HOH HOH . T 6 HOH A 4 208 208 HOH HOH . T 6 HOH A 5 211 211 HOH HOH . T 6 HOH A 6 214 214 HOH HOH . T 6 HOH A 7 215 215 HOH HOH . T 6 HOH A 8 216 216 HOH HOH . T 6 HOH A 9 217 217 HOH HOH . T 6 HOH A 10 218 218 HOH HOH . T 6 HOH A 11 220 220 HOH HOH . T 6 HOH A 12 227 227 HOH HOH . T 6 HOH A 13 230 230 HOH HOH . T 6 HOH A 14 232 232 HOH HOH . T 6 HOH A 15 238 238 HOH HOH . T 6 HOH A 16 240 240 HOH HOH . T 6 HOH A 17 241 241 HOH HOH . T 6 HOH A 18 246 246 HOH HOH . T 6 HOH A 19 250 250 HOH HOH . T 6 HOH A 20 251 251 HOH HOH . T 6 HOH A 21 257 257 HOH HOH . T 6 HOH A 22 259 259 HOH HOH . T 6 HOH A 23 260 260 HOH HOH . T 6 HOH A 24 263 263 HOH HOH . T 6 HOH A 25 265 265 HOH HOH . T 6 HOH A 26 267 267 HOH HOH . T 6 HOH A 27 270 270 HOH HOH . T 6 HOH A 28 274 274 HOH HOH . T 6 HOH A 29 279 279 HOH HOH . T 6 HOH A 30 282 282 HOH HOH . T 6 HOH A 31 283 283 HOH HOH . T 6 HOH A 32 284 284 HOH HOH . T 6 HOH A 33 287 287 HOH HOH . T 6 HOH A 34 288 288 HOH HOH . T 6 HOH A 35 291 291 HOH HOH . T 6 HOH A 36 292 292 HOH HOH . T 6 HOH A 37 299 299 HOH HOH . T 6 HOH A 38 300 300 HOH HOH . T 6 HOH A 39 302 302 HOH HOH . T 6 HOH A 40 304 304 HOH HOH . T 6 HOH A 41 308 308 HOH HOH . T 6 HOH A 42 309 309 HOH HOH . T 6 HOH A 43 312 312 HOH HOH . T 6 HOH A 44 313 313 HOH HOH . T 6 HOH A 45 315 315 HOH HOH . T 6 HOH A 46 316 316 HOH HOH . T 6 HOH A 47 317 317 HOH HOH . T 6 HOH A 48 320 320 HOH HOH . T 6 HOH A 49 322 322 HOH HOH . T 6 HOH A 50 337 337 HOH HOH . T 6 HOH A 51 338 338 HOH HOH . T 6 HOH A 52 345 345 HOH HOH . T 6 HOH A 53 346 346 HOH HOH . T 6 HOH A 54 348 348 HOH HOH . T 6 HOH A 55 350 350 HOH HOH . T 6 HOH A 56 351 351 HOH HOH . T 6 HOH A 57 352 352 HOH HOH . T 6 HOH A 58 356 356 HOH HOH . T 6 HOH A 59 360 360 HOH HOH . T 6 HOH A 60 362 362 HOH HOH . T 6 HOH A 61 364 364 HOH HOH . T 6 HOH A 62 365 365 HOH HOH . T 6 HOH A 63 368 368 HOH HOH . T 6 HOH A 64 369 369 HOH HOH . T 6 HOH A 65 372 372 HOH HOH . T 6 HOH A 66 383 383 HOH HOH . T 6 HOH A 67 386 386 HOH HOH . T 6 HOH A 68 389 389 HOH HOH . T 6 HOH A 69 396 396 HOH HOH . T 6 HOH A 70 397 397 HOH HOH . T 6 HOH A 71 398 398 HOH HOH . T 6 HOH A 72 401 401 HOH HOH . T 6 HOH A 73 403 403 HOH HOH . T 6 HOH A 74 411 411 HOH HOH . T 6 HOH A 75 413 413 HOH HOH . T 6 HOH A 76 418 418 HOH HOH . T 6 HOH A 77 419 419 HOH HOH . T 6 HOH A 78 424 424 HOH HOH . T 6 HOH A 79 428 428 HOH HOH . T 6 HOH A 80 434 434 HOH HOH . T 6 HOH A 81 435 435 HOH HOH . T 6 HOH A 82 437 437 HOH HOH . T 6 HOH A 83 441 441 HOH HOH . T 6 HOH A 84 442 442 HOH HOH . T 6 HOH A 85 443 443 HOH HOH . T 6 HOH A 86 446 446 HOH HOH . T 6 HOH A 87 447 447 HOH HOH . T 6 HOH A 88 449 449 HOH HOH . T 6 HOH A 89 453 453 HOH HOH . T 6 HOH A 90 456 456 HOH HOH . T 6 HOH A 91 457 457 HOH HOH . T 6 HOH A 92 459 459 HOH HOH . U 6 HOH B 1 204 204 HOH HOH . U 6 HOH B 2 205 205 HOH HOH . U 6 HOH B 3 206 206 HOH HOH . U 6 HOH B 4 209 209 HOH HOH . U 6 HOH B 5 210 210 HOH HOH . U 6 HOH B 6 219 219 HOH HOH . U 6 HOH B 7 221 221 HOH HOH . U 6 HOH B 8 222 222 HOH HOH . U 6 HOH B 9 226 226 HOH HOH . U 6 HOH B 10 231 231 HOH HOH . U 6 HOH B 11 233 233 HOH HOH . U 6 HOH B 12 234 234 HOH HOH . U 6 HOH B 13 235 235 HOH HOH . U 6 HOH B 14 236 236 HOH HOH . U 6 HOH B 15 237 237 HOH HOH . U 6 HOH B 16 239 239 HOH HOH . U 6 HOH B 17 244 244 HOH HOH . U 6 HOH B 18 245 245 HOH HOH . U 6 HOH B 19 252 252 HOH HOH . U 6 HOH B 20 261 261 HOH HOH . U 6 HOH B 21 264 264 HOH HOH . U 6 HOH B 22 266 266 HOH HOH . U 6 HOH B 23 275 275 HOH HOH . U 6 HOH B 24 277 277 HOH HOH . U 6 HOH B 25 278 278 HOH HOH . U 6 HOH B 26 280 280 HOH HOH . U 6 HOH B 27 281 281 HOH HOH . U 6 HOH B 28 285 285 HOH HOH . U 6 HOH B 29 286 286 HOH HOH . U 6 HOH B 30 290 290 HOH HOH . U 6 HOH B 31 294 294 HOH HOH . U 6 HOH B 32 295 295 HOH HOH . U 6 HOH B 33 296 296 HOH HOH . U 6 HOH B 34 298 298 HOH HOH . U 6 HOH B 35 307 307 HOH HOH . U 6 HOH B 36 314 314 HOH HOH . U 6 HOH B 37 318 318 HOH HOH . U 6 HOH B 38 319 319 HOH HOH . U 6 HOH B 39 321 321 HOH HOH . U 6 HOH B 40 323 323 HOH HOH . U 6 HOH B 41 324 324 HOH HOH . U 6 HOH B 42 325 325 HOH HOH . U 6 HOH B 43 326 326 HOH HOH . U 6 HOH B 44 327 327 HOH HOH . U 6 HOH B 45 330 330 HOH HOH . U 6 HOH B 46 332 332 HOH HOH . U 6 HOH B 47 333 333 HOH HOH . U 6 HOH B 48 336 336 HOH HOH . U 6 HOH B 49 340 340 HOH HOH . U 6 HOH B 50 341 341 HOH HOH . U 6 HOH B 51 342 342 HOH HOH . U 6 HOH B 52 349 349 HOH HOH . U 6 HOH B 53 353 353 HOH HOH . U 6 HOH B 54 355 355 HOH HOH . U 6 HOH B 55 357 357 HOH HOH . U 6 HOH B 56 363 363 HOH HOH . U 6 HOH B 57 367 367 HOH HOH . U 6 HOH B 58 370 370 HOH HOH . U 6 HOH B 59 371 371 HOH HOH . U 6 HOH B 60 375 375 HOH HOH . U 6 HOH B 61 376 376 HOH HOH . U 6 HOH B 62 377 377 HOH HOH . U 6 HOH B 63 379 379 HOH HOH . U 6 HOH B 64 380 380 HOH HOH . U 6 HOH B 65 384 384 HOH HOH . U 6 HOH B 66 388 388 HOH HOH . U 6 HOH B 67 394 394 HOH HOH . U 6 HOH B 68 399 399 HOH HOH . U 6 HOH B 69 400 400 HOH HOH . U 6 HOH B 70 402 402 HOH HOH . U 6 HOH B 71 405 405 HOH HOH . U 6 HOH B 72 407 407 HOH HOH . U 6 HOH B 73 408 408 HOH HOH . U 6 HOH B 74 409 409 HOH HOH . U 6 HOH B 75 410 410 HOH HOH . U 6 HOH B 76 412 412 HOH HOH . U 6 HOH B 77 414 414 HOH HOH . U 6 HOH B 78 415 415 HOH HOH . U 6 HOH B 79 420 420 HOH HOH . U 6 HOH B 80 421 421 HOH HOH . U 6 HOH B 81 425 425 HOH HOH . U 6 HOH B 82 426 426 HOH HOH . U 6 HOH B 83 430 430 HOH HOH . U 6 HOH B 84 431 431 HOH HOH . U 6 HOH B 85 432 432 HOH HOH . U 6 HOH B 86 433 433 HOH HOH . U 6 HOH B 87 444 444 HOH HOH . U 6 HOH B 88 445 445 HOH HOH . U 6 HOH B 89 448 448 HOH HOH . U 6 HOH B 90 451 451 HOH HOH . U 6 HOH B 91 454 454 HOH HOH . U 6 HOH B 92 458 458 HOH HOH . V 6 HOH C 1 202 202 HOH HOH . V 6 HOH C 2 212 212 HOH HOH . V 6 HOH C 3 213 213 HOH HOH . V 6 HOH C 4 223 223 HOH HOH . V 6 HOH C 5 224 224 HOH HOH . V 6 HOH C 6 225 225 HOH HOH . V 6 HOH C 7 228 228 HOH HOH . V 6 HOH C 8 229 229 HOH HOH . V 6 HOH C 9 242 242 HOH HOH . V 6 HOH C 10 243 243 HOH HOH . V 6 HOH C 11 247 247 HOH HOH . V 6 HOH C 12 248 248 HOH HOH . V 6 HOH C 13 249 249 HOH HOH . V 6 HOH C 14 253 253 HOH HOH . V 6 HOH C 15 254 254 HOH HOH . V 6 HOH C 16 255 255 HOH HOH . V 6 HOH C 17 256 256 HOH HOH . V 6 HOH C 18 258 258 HOH HOH . V 6 HOH C 19 262 262 HOH HOH . V 6 HOH C 20 268 268 HOH HOH . V 6 HOH C 21 269 269 HOH HOH . V 6 HOH C 22 271 271 HOH HOH . V 6 HOH C 23 272 272 HOH HOH . V 6 HOH C 24 273 273 HOH HOH . V 6 HOH C 25 276 276 HOH HOH . V 6 HOH C 26 289 289 HOH HOH . V 6 HOH C 27 293 293 HOH HOH . V 6 HOH C 28 297 297 HOH HOH . V 6 HOH C 29 301 301 HOH HOH . V 6 HOH C 30 303 303 HOH HOH . V 6 HOH C 31 305 305 HOH HOH . V 6 HOH C 32 306 306 HOH HOH . V 6 HOH C 33 310 310 HOH HOH . V 6 HOH C 34 311 311 HOH HOH . V 6 HOH C 35 328 328 HOH HOH . V 6 HOH C 36 329 329 HOH HOH . V 6 HOH C 37 331 331 HOH HOH . V 6 HOH C 38 334 334 HOH HOH . V 6 HOH C 39 335 335 HOH HOH . V 6 HOH C 40 339 339 HOH HOH . V 6 HOH C 41 343 343 HOH HOH . V 6 HOH C 42 344 344 HOH HOH . V 6 HOH C 43 347 347 HOH HOH . V 6 HOH C 44 354 354 HOH HOH . V 6 HOH C 45 358 358 HOH HOH . V 6 HOH C 46 359 359 HOH HOH . V 6 HOH C 47 361 361 HOH HOH . V 6 HOH C 48 366 366 HOH HOH . V 6 HOH C 49 373 373 HOH HOH . V 6 HOH C 50 374 374 HOH HOH . V 6 HOH C 51 378 378 HOH HOH . V 6 HOH C 52 381 381 HOH HOH . V 6 HOH C 53 382 382 HOH HOH . V 6 HOH C 54 385 385 HOH HOH . V 6 HOH C 55 387 387 HOH HOH . V 6 HOH C 56 390 390 HOH HOH . V 6 HOH C 57 391 391 HOH HOH . V 6 HOH C 58 392 392 HOH HOH . V 6 HOH C 59 393 393 HOH HOH . V 6 HOH C 60 395 395 HOH HOH . V 6 HOH C 61 404 404 HOH HOH . V 6 HOH C 62 406 406 HOH HOH . V 6 HOH C 63 416 416 HOH HOH . V 6 HOH C 64 417 417 HOH HOH . V 6 HOH C 65 422 422 HOH HOH . V 6 HOH C 66 423 423 HOH HOH . V 6 HOH C 67 427 427 HOH HOH . V 6 HOH C 68 429 429 HOH HOH . V 6 HOH C 69 436 436 HOH HOH . V 6 HOH C 70 438 438 HOH HOH . V 6 HOH C 71 439 439 HOH HOH . V 6 HOH C 72 440 440 HOH HOH . V 6 HOH C 73 450 450 HOH HOH . V 6 HOH C 74 452 452 HOH HOH . V 6 HOH C 75 455 455 HOH HOH . V 6 HOH C 76 460 460 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . B . G 4 29.127 14.89 15.094 0.48 25.29 ? C1 GOL 701 A 1 HETATM 2 O O1 GOL . B . G 4 27.858 14.482 14.577 0.48 17.71 ? O1 GOL 701 A 1 HETATM 3 C C2 GOL . B . G 4 29.505 16.25 14.503 0.48 26.83 ? C2 GOL 701 A 1 HETATM 4 O O2 GOL . B . G 4 28.381 17.131 14.579 0.48 27.61 ? O2 GOL 701 A 1 HETATM 5 C C3 GOL . B . G 4 30.671 16.845 15.295 0.48 28.96 ? C3 GOL 701 A 1 HETATM 6 O O3 GOL . B . G 4 30.643 18.27 15.184 0.48 30.58 ? O3 GOL 701 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 523 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 6 #