data_2OPG
#
_model_server_result.job_id            Fs6nKboNBhYwwMu79yBWpA 
_model_server_result.datetime_utc      '2025-03-04 15:12:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2opg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1}' 
#
_entry.id    2OPG 
#
_exptl.entry_id    2OPG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2OPG 
_cell.length_a            54.944 
_cell.length_b            54.944 
_cell.length_c            118.355 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2OPG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D 1 1 
B,E 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C NA NA . A NA 1 1_555 A NE2 GLN 54 A GLN 1676 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.996 ? 
metalc ? metalc2 C NA NA . A NA 1 1_555 A O ILE 55 A ILE 1677 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? 
metalc ? metalc3 C NA NA . A NA 1 1_555 A O LEU 63 A LEU 1685 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.967 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2OPG 
_atom_sites.fract_transf_matrix[1][1]    0.0182 
_atom_sites.fract_transf_matrix[1][2]    0.010508 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021016 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008449 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NA A 1 1 1 NA NA . 
D 3 HOH A 1 2 1 HOH HOH . 
D 3 HOH A 2 8 8 HOH HOH . 
D 3 HOH A 3 11 11 HOH HOH . 
D 3 HOH A 4 12 12 HOH HOH . 
D 3 HOH A 5 13 13 HOH HOH . 
D 3 HOH A 6 14 14 HOH HOH . 
D 3 HOH A 7 15 15 HOH HOH . 
D 3 HOH A 8 17 17 HOH HOH . 
D 3 HOH A 9 19 19 HOH HOH . 
D 3 HOH A 10 23 23 HOH HOH . 
D 3 HOH A 11 26 26 HOH HOH . 
D 3 HOH A 12 27 27 HOH HOH . 
D 3 HOH A 13 32 32 HOH HOH . 
D 3 HOH A 14 34 34 HOH HOH . 
D 3 HOH A 15 35 35 HOH HOH . 
D 3 HOH A 16 39 39 HOH HOH . 
D 3 HOH A 17 42 42 HOH HOH . 
D 3 HOH A 18 43 43 HOH HOH . 
D 3 HOH A 19 44 44 HOH HOH . 
D 3 HOH A 20 46 46 HOH HOH . 
D 3 HOH A 21 47 47 HOH HOH . 
D 3 HOH A 22 49 49 HOH HOH . 
D 3 HOH A 23 51 51 HOH HOH . 
D 3 HOH A 24 52 52 HOH HOH . 
D 3 HOH A 25 54 54 HOH HOH . 
D 3 HOH A 26 55 55 HOH HOH . 
D 3 HOH A 27 56 56 HOH HOH . 
D 3 HOH A 28 58 58 HOH HOH . 
D 3 HOH A 29 59 59 HOH HOH . 
D 3 HOH A 30 61 61 HOH HOH . 
D 3 HOH A 31 62 62 HOH HOH . 
D 3 HOH A 32 67 67 HOH HOH . 
D 3 HOH A 33 69 69 HOH HOH . 
D 3 HOH A 34 73 73 HOH HOH . 
D 3 HOH A 35 75 75 HOH HOH . 
D 3 HOH A 36 76 76 HOH HOH . 
D 3 HOH A 37 77 77 HOH HOH . 
D 3 HOH A 38 82 82 HOH HOH . 
D 3 HOH A 39 85 85 HOH HOH . 
D 3 HOH A 40 86 86 HOH HOH . 
D 3 HOH A 41 87 87 HOH HOH . 
D 3 HOH A 42 89 89 HOH HOH . 
D 3 HOH A 43 90 90 HOH HOH . 
D 3 HOH A 44 93 93 HOH HOH . 
D 3 HOH A 45 99 99 HOH HOH . 
D 3 HOH A 46 100 100 HOH HOH . 
D 3 HOH A 47 102 102 HOH HOH . 
D 3 HOH A 48 105 105 HOH HOH . 
D 3 HOH A 49 107 107 HOH HOH . 
D 3 HOH A 50 108 108 HOH HOH . 
D 3 HOH A 51 109 109 HOH HOH . 
D 3 HOH A 52 118 118 HOH HOH . 
D 3 HOH A 53 119 119 HOH HOH . 
D 3 HOH A 54 120 120 HOH HOH . 
D 3 HOH A 55 121 121 HOH HOH . 
D 3 HOH A 56 122 122 HOH HOH . 
D 3 HOH A 57 124 124 HOH HOH . 
D 3 HOH A 58 128 128 HOH HOH . 
D 3 HOH A 59 129 129 HOH HOH . 
D 3 HOH A 60 135 135 HOH HOH . 
D 3 HOH A 61 139 139 HOH HOH . 
D 3 HOH A 62 142 142 HOH HOH . 
D 3 HOH A 63 143 143 HOH HOH . 
D 3 HOH A 64 146 146 HOH HOH . 
D 3 HOH A 65 150 150 HOH HOH . 
D 3 HOH A 66 154 154 HOH HOH . 
D 3 HOH A 67 155 155 HOH HOH . 
D 3 HOH A 68 158 158 HOH HOH . 
D 3 HOH A 69 159 159 HOH HOH . 
D 3 HOH A 70 161 161 HOH HOH . 
D 3 HOH A 71 162 162 HOH HOH . 
D 3 HOH A 72 164 164 HOH HOH . 
D 3 HOH A 73 165 165 HOH HOH . 
D 3 HOH A 74 167 167 HOH HOH . 
D 3 HOH A 75 172 172 HOH HOH . 
D 3 HOH A 76 173 173 HOH HOH . 
D 3 HOH A 77 174 174 HOH HOH . 
D 3 HOH A 78 176 176 HOH HOH . 
D 3 HOH A 79 178 178 HOH HOH . 
D 3 HOH A 80 185 185 HOH HOH . 
D 3 HOH A 81 187 187 HOH HOH . 
D 3 HOH A 82 190 190 HOH HOH . 
D 3 HOH A 83 195 195 HOH HOH . 
D 3 HOH A 84 199 199 HOH HOH . 
D 3 HOH A 85 203 203 HOH HOH . 
D 3 HOH A 86 209 209 HOH HOH . 
D 3 HOH A 87 211 211 HOH HOH . 
D 3 HOH A 88 218 218 HOH HOH . 
D 3 HOH A 89 219 219 HOH HOH . 
D 3 HOH A 90 220 220 HOH HOH . 
D 3 HOH A 91 221 221 HOH HOH . 
D 3 HOH A 92 223 223 HOH HOH . 
D 3 HOH A 93 224 224 HOH HOH . 
D 3 HOH A 94 226 226 HOH HOH . 
D 3 HOH A 95 228 228 HOH HOH . 
D 3 HOH A 96 229 229 HOH HOH . 
D 3 HOH A 97 230 230 HOH HOH . 
D 3 HOH A 98 231 231 HOH HOH . 
D 3 HOH A 99 232 232 HOH HOH . 
D 3 HOH A 100 235 235 HOH HOH . 
D 3 HOH A 101 242 242 HOH HOH . 
D 3 HOH A 102 251 251 HOH HOH . 
D 3 HOH A 103 252 252 HOH HOH . 
D 3 HOH A 104 253 253 HOH HOH . 
D 3 HOH A 105 254 254 HOH HOH . 
D 3 HOH A 106 260 260 HOH HOH . 
D 3 HOH A 107 268 268 HOH HOH . 
D 3 HOH A 108 269 269 HOH HOH . 
D 3 HOH A 109 270 270 HOH HOH . 
D 3 HOH A 110 271 271 HOH HOH . 
D 3 HOH A 111 272 272 HOH HOH . 
D 3 HOH A 112 273 273 HOH HOH . 
E 3 HOH B 1 3 3 HOH HOH . 
E 3 HOH B 2 4 4 HOH HOH . 
E 3 HOH B 3 5 5 HOH HOH . 
E 3 HOH B 4 6 6 HOH HOH . 
E 3 HOH B 5 7 7 HOH HOH . 
E 3 HOH B 6 9 9 HOH HOH . 
E 3 HOH B 7 10 10 HOH HOH . 
E 3 HOH B 8 16 16 HOH HOH . 
E 3 HOH B 9 18 18 HOH HOH . 
E 3 HOH B 10 20 20 HOH HOH . 
E 3 HOH B 11 21 21 HOH HOH . 
E 3 HOH B 12 22 22 HOH HOH . 
E 3 HOH B 13 24 24 HOH HOH . 
E 3 HOH B 14 25 25 HOH HOH . 
E 3 HOH B 15 28 28 HOH HOH . 
E 3 HOH B 16 29 29 HOH HOH . 
E 3 HOH B 17 30 30 HOH HOH . 
E 3 HOH B 18 31 31 HOH HOH . 
E 3 HOH B 19 33 33 HOH HOH . 
E 3 HOH B 20 36 36 HOH HOH . 
E 3 HOH B 21 37 37 HOH HOH . 
E 3 HOH B 22 38 38 HOH HOH . 
E 3 HOH B 23 40 40 HOH HOH . 
E 3 HOH B 24 41 41 HOH HOH . 
E 3 HOH B 25 45 45 HOH HOH . 
E 3 HOH B 26 50 50 HOH HOH . 
E 3 HOH B 27 53 53 HOH HOH . 
E 3 HOH B 28 57 57 HOH HOH . 
E 3 HOH B 29 63 63 HOH HOH . 
E 3 HOH B 30 64 64 HOH HOH . 
E 3 HOH B 31 65 65 HOH HOH . 
E 3 HOH B 32 68 68 HOH HOH . 
E 3 HOH B 33 70 70 HOH HOH . 
E 3 HOH B 34 72 72 HOH HOH . 
E 3 HOH B 35 74 74 HOH HOH . 
E 3 HOH B 36 78 78 HOH HOH . 
E 3 HOH B 37 79 79 HOH HOH . 
E 3 HOH B 38 80 80 HOH HOH . 
E 3 HOH B 39 81 81 HOH HOH . 
E 3 HOH B 40 83 83 HOH HOH . 
E 3 HOH B 41 84 84 HOH HOH . 
E 3 HOH B 42 88 88 HOH HOH . 
E 3 HOH B 43 91 91 HOH HOH . 
E 3 HOH B 44 92 92 HOH HOH . 
E 3 HOH B 45 94 94 HOH HOH . 
E 3 HOH B 46 96 96 HOH HOH . 
E 3 HOH B 47 97 97 HOH HOH . 
E 3 HOH B 48 98 98 HOH HOH . 
E 3 HOH B 49 101 101 HOH HOH . 
E 3 HOH B 50 103 103 HOH HOH . 
E 3 HOH B 51 104 104 HOH HOH . 
E 3 HOH B 52 106 106 HOH HOH . 
E 3 HOH B 53 110 110 HOH HOH . 
E 3 HOH B 54 111 111 HOH HOH . 
E 3 HOH B 55 112 112 HOH HOH . 
E 3 HOH B 56 113 113 HOH HOH . 
E 3 HOH B 57 114 114 HOH HOH . 
E 3 HOH B 58 115 115 HOH HOH . 
E 3 HOH B 59 116 116 HOH HOH . 
E 3 HOH B 60 117 117 HOH HOH . 
E 3 HOH B 61 123 123 HOH HOH . 
E 3 HOH B 62 125 125 HOH HOH . 
E 3 HOH B 63 126 126 HOH HOH . 
E 3 HOH B 64 130 130 HOH HOH . 
E 3 HOH B 65 132 132 HOH HOH . 
E 3 HOH B 66 133 133 HOH HOH . 
E 3 HOH B 67 134 134 HOH HOH . 
E 3 HOH B 68 136 136 HOH HOH . 
E 3 HOH B 69 138 138 HOH HOH . 
E 3 HOH B 70 140 140 HOH HOH . 
E 3 HOH B 71 144 144 HOH HOH . 
E 3 HOH B 72 145 145 HOH HOH . 
E 3 HOH B 73 148 148 HOH HOH . 
E 3 HOH B 74 153 153 HOH HOH . 
E 3 HOH B 75 157 157 HOH HOH . 
E 3 HOH B 76 166 166 HOH HOH . 
E 3 HOH B 77 168 168 HOH HOH . 
E 3 HOH B 78 169 169 HOH HOH . 
E 3 HOH B 79 170 170 HOH HOH . 
E 3 HOH B 80 171 171 HOH HOH . 
E 3 HOH B 81 175 175 HOH HOH . 
E 3 HOH B 82 177 177 HOH HOH . 
E 3 HOH B 83 179 179 HOH HOH . 
E 3 HOH B 84 181 181 HOH HOH . 
E 3 HOH B 85 182 182 HOH HOH . 
E 3 HOH B 86 183 183 HOH HOH . 
E 3 HOH B 87 184 184 HOH HOH . 
E 3 HOH B 88 186 186 HOH HOH . 
E 3 HOH B 89 189 189 HOH HOH . 
E 3 HOH B 90 193 193 HOH HOH . 
E 3 HOH B 91 196 196 HOH HOH . 
E 3 HOH B 92 198 198 HOH HOH . 
E 3 HOH B 93 200 200 HOH HOH . 
E 3 HOH B 94 204 204 HOH HOH . 
E 3 HOH B 95 207 207 HOH HOH . 
E 3 HOH B 96 210 210 HOH HOH . 
E 3 HOH B 97 212 212 HOH HOH . 
E 3 HOH B 98 215 215 HOH HOH . 
E 3 HOH B 99 217 217 HOH HOH . 
E 3 HOH B 100 222 222 HOH HOH . 
E 3 HOH B 101 225 225 HOH HOH . 
E 3 HOH B 102 236 236 HOH HOH . 
E 3 HOH B 103 237 237 HOH HOH . 
E 3 HOH B 104 238 238 HOH HOH . 
E 3 HOH B 105 239 239 HOH HOH . 
E 3 HOH B 106 241 241 HOH HOH . 
E 3 HOH B 107 246 246 HOH HOH . 
E 3 HOH B 108 247 247 HOH HOH . 
E 3 HOH B 109 248 248 HOH HOH . 
E 3 HOH B 110 250 250 HOH HOH . 
E 3 HOH B 111 255 255 HOH HOH . 
E 3 HOH B 112 256 256 HOH HOH . 
E 3 HOH B 113 257 257 HOH HOH . 
E 3 HOH B 114 258 258 HOH HOH . 
E 3 HOH B 115 259 259 HOH HOH . 
E 3 HOH B 116 262 262 HOH HOH . 
E 3 HOH B 117 263 263 HOH HOH . 
E 3 HOH B 118 264 264 HOH HOH . 
E 3 HOH B 119 265 265 HOH HOH . 
E 3 HOH B 120 266 266 HOH HOH . 
E 3 HOH B 121 267 267 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               38.457 
_atom_site.Cartn_y               20.056 
_atom_site.Cartn_z               4.441 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        23.44 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           1 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           240 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#