data_2OPP # _model_server_result.job_id MgyPRXvEOzlxS8pMu67VpQ _model_server_result.datetime_utc '2025-01-03 06:03:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2opp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1300}' # _entry.id 2OPP # _exptl.entry_id 2OPP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2OPP _cell.length_a 138.5 _cell.length_b 115.3 _cell.length_c 65.9 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OPP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 276 A LEU 279 1_555 A N CSD 277 A CSD 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C CSD 277 A CSD 280 1_555 A N LYS 278 A LYS 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? metalc ? metalc1 A OD1 ASP 440 A ASP 443 1_555 F MG MG . A MG 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc2 A OD1 ASN 542 A ASN 545 1_555 F MG MG . A MG 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.741 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 313 n n P O2 PO4 sing 314 n n P O3 PO4 sing 315 n n P O4 PO4 sing 316 n n # _atom_sites.entry_id 2OPP _atom_sites.fract_transf_matrix[1][1] 0.00722 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008673 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015175 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 A 1 1300 1300 PO4 PO4 . D 3 PO4 A 1 1301 1301 PO4 PO4 . E 3 PO4 A 1 1302 1302 PO4 PO4 . F 4 MG A 1 1303 1303 MG MG . G 5 HBQ A 1 999 999 HBQ HBQ . H 6 HOH A 1 1001 1001 HOH HOH . H 6 HOH A 2 1003 1003 HOH HOH . H 6 HOH A 3 1013 1013 HOH HOH . H 6 HOH A 4 1014 1014 HOH HOH . H 6 HOH A 5 1015 1015 HOH HOH . H 6 HOH A 6 1016 1016 HOH HOH . H 6 HOH A 7 1017 1017 HOH HOH . H 6 HOH A 8 1018 1018 HOH HOH . H 6 HOH A 9 1019 1019 HOH HOH . H 6 HOH A 10 1020 1020 HOH HOH . H 6 HOH A 11 1021 1021 HOH HOH . H 6 HOH A 12 1022 1022 HOH HOH . H 6 HOH A 13 1025 1025 HOH HOH . H 6 HOH A 14 1026 1026 HOH HOH . H 6 HOH A 15 1027 1027 HOH HOH . H 6 HOH A 16 1029 1029 HOH HOH . H 6 HOH A 17 1030 1030 HOH HOH . H 6 HOH A 18 1031 1031 HOH HOH . H 6 HOH A 19 1032 1032 HOH HOH . H 6 HOH A 20 1033 1033 HOH HOH . H 6 HOH A 21 1034 1034 HOH HOH . H 6 HOH A 22 1036 1036 HOH HOH . H 6 HOH A 23 1037 1037 HOH HOH . H 6 HOH A 24 1038 1038 HOH HOH . H 6 HOH A 25 1039 1039 HOH HOH . H 6 HOH A 26 1042 1042 HOH HOH . H 6 HOH A 27 1043 1043 HOH HOH . H 6 HOH A 28 1044 1044 HOH HOH . H 6 HOH A 29 1045 1045 HOH HOH . H 6 HOH A 30 1046 1046 HOH HOH . H 6 HOH A 31 1047 1047 HOH HOH . H 6 HOH A 32 1050 1050 HOH HOH . H 6 HOH A 33 1051 1051 HOH HOH . H 6 HOH A 34 1054 1054 HOH HOH . H 6 HOH A 35 1055 1055 HOH HOH . H 6 HOH A 36 1056 1056 HOH HOH . H 6 HOH A 37 1063 1063 HOH HOH . H 6 HOH A 38 1064 1064 HOH HOH . H 6 HOH A 39 1067 1067 HOH HOH . H 6 HOH A 40 1070 1070 HOH HOH . H 6 HOH A 41 1071 1071 HOH HOH . H 6 HOH A 42 1073 1073 HOH HOH . H 6 HOH A 43 1075 1075 HOH HOH . H 6 HOH A 44 1112 1112 HOH HOH . H 6 HOH A 45 1114 1114 HOH HOH . H 6 HOH A 46 1116 1116 HOH HOH . H 6 HOH A 47 1118 1118 HOH HOH . H 6 HOH A 48 1122 1122 HOH HOH . H 6 HOH A 49 1123 1123 HOH HOH . H 6 HOH A 50 1124 1124 HOH HOH . H 6 HOH A 51 1125 1125 HOH HOH . H 6 HOH A 52 1126 1126 HOH HOH . H 6 HOH A 53 1127 1127 HOH HOH . H 6 HOH A 54 1128 1128 HOH HOH . H 6 HOH A 55 1129 1129 HOH HOH . H 6 HOH A 56 1131 1131 HOH HOH . H 6 HOH A 57 1132 1132 HOH HOH . H 6 HOH A 58 1133 1133 HOH HOH . H 6 HOH A 59 1134 1134 HOH HOH . H 6 HOH A 60 1135 1135 HOH HOH . H 6 HOH A 61 1138 1138 HOH HOH . H 6 HOH A 62 1177 1177 HOH HOH . H 6 HOH A 63 1178 1178 HOH HOH . H 6 HOH A 64 1181 1181 HOH HOH . H 6 HOH A 65 1182 1182 HOH HOH . H 6 HOH A 66 1183 1183 HOH HOH . H 6 HOH A 67 1184 1184 HOH HOH . H 6 HOH A 68 1185 1185 HOH HOH . I 6 HOH B 1 1005 1005 HOH HOH . I 6 HOH B 2 1006 1006 HOH HOH . I 6 HOH B 3 1007 1007 HOH HOH . I 6 HOH B 4 1008 1008 HOH HOH . I 6 HOH B 5 1009 1009 HOH HOH . I 6 HOH B 6 1010 1010 HOH HOH . I 6 HOH B 7 1012 1012 HOH HOH . I 6 HOH B 8 1023 1023 HOH HOH . I 6 HOH B 9 1057 1057 HOH HOH . I 6 HOH B 10 1058 1058 HOH HOH . I 6 HOH B 11 1061 1061 HOH HOH . I 6 HOH B 12 1076 1076 HOH HOH . I 6 HOH B 13 1077 1077 HOH HOH . I 6 HOH B 14 1078 1078 HOH HOH . I 6 HOH B 15 1079 1079 HOH HOH . I 6 HOH B 16 1080 1080 HOH HOH . I 6 HOH B 17 1081 1081 HOH HOH . I 6 HOH B 18 1082 1082 HOH HOH . I 6 HOH B 19 1083 1083 HOH HOH . I 6 HOH B 20 1084 1084 HOH HOH . I 6 HOH B 21 1085 1085 HOH HOH . I 6 HOH B 22 1086 1086 HOH HOH . I 6 HOH B 23 1088 1088 HOH HOH . I 6 HOH B 24 1089 1089 HOH HOH . I 6 HOH B 25 1090 1090 HOH HOH . I 6 HOH B 26 1091 1091 HOH HOH . I 6 HOH B 27 1092 1092 HOH HOH . I 6 HOH B 28 1093 1093 HOH HOH . I 6 HOH B 29 1094 1094 HOH HOH . I 6 HOH B 30 1095 1095 HOH HOH . I 6 HOH B 31 1096 1096 HOH HOH . I 6 HOH B 32 1097 1097 HOH HOH . I 6 HOH B 33 1098 1098 HOH HOH . I 6 HOH B 34 1099 1099 HOH HOH . I 6 HOH B 35 1100 1100 HOH HOH . I 6 HOH B 36 1101 1101 HOH HOH . I 6 HOH B 37 1103 1103 HOH HOH . I 6 HOH B 38 1106 1106 HOH HOH . I 6 HOH B 39 1107 1107 HOH HOH . I 6 HOH B 40 1108 1108 HOH HOH . I 6 HOH B 41 1110 1110 HOH HOH . I 6 HOH B 42 1111 1111 HOH HOH . I 6 HOH B 43 1113 1113 HOH HOH . I 6 HOH B 44 1115 1115 HOH HOH . I 6 HOH B 45 1121 1121 HOH HOH . I 6 HOH B 46 1140 1140 HOH HOH . I 6 HOH B 47 1141 1141 HOH HOH . I 6 HOH B 48 1142 1142 HOH HOH . I 6 HOH B 49 1143 1143 HOH HOH . I 6 HOH B 50 1144 1144 HOH HOH . I 6 HOH B 51 1166 1166 HOH HOH . I 6 HOH B 52 1167 1167 HOH HOH . I 6 HOH B 53 1169 1169 HOH HOH . I 6 HOH B 54 1170 1170 HOH HOH . I 6 HOH B 55 1171 1171 HOH HOH . I 6 HOH B 56 1172 1172 HOH HOH . I 6 HOH B 57 1173 1173 HOH HOH . I 6 HOH B 58 1175 1175 HOH HOH . I 6 HOH B 59 1176 1176 HOH HOH . I 6 HOH B 60 1179 1179 HOH HOH . I 6 HOH B 61 1180 1180 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 3 22.955 23.929 -4.54 1 125.17 ? P PO4 1300 A 1 HETATM 2 O O1 PO4 . . . C 3 21.804 23.114 -4.077 1 118.99 ? O1 PO4 1300 A 1 HETATM 3 O O2 PO4 . . . C 3 24.113 23.041 -4.813 1 119 ? O2 PO4 1300 A 1 HETATM 4 O O3 PO4 . . . C 3 22.584 24.65 -5.784 1 138.99 ? O3 PO4 1300 A 1 HETATM 5 O O4 PO4 . . . C 3 23.317 24.913 -3.486 1 115.58 ? O4 PO4 1300 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #