data_2OPY
#
_model_server_result.job_id            x5iuXMLn6FFKTtrtGRhiLA 
_model_server_result.datetime_utc      '2025-03-06 23:11:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2opy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":101}' 
#
_entry.id    2OPY 
#
_exptl.entry_id    2OPY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              439.464 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-({2-[(1S)-1-AMINOETHYL]-1,3-OXAZOL-4-YL}CARBONYL)-L-PROLYL-L-TRYPTOPHAN 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2OPY 
_cell.length_a            71.2 
_cell.length_b            71.2 
_cell.length_c            105.1 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2OPY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        91 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -71.2 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B ZN ZN . A ZN 102 1_555 A SG CYS 52 A CYS 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc2 B ZN ZN . A ZN 102 1_555 A SG CYS 55 A CYS 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? 
metalc ? metalc3 B ZN ZN . A ZN 102 1_555 A NE2 HIS 72 A HIS 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc4 B ZN ZN . A ZN 102 1_555 A SG CYS 79 A CYS 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? 
#
_chem_comp.formula           'C22 H25 N5 O5' 
_chem_comp.formula_weight    439.464 
_chem_comp.id                CO9 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-({2-[(1S)-1-AMINOETHYL]-1,3-OXAZOL-4-YL}CARBONYL)-L-PROLYL-L-TRYPTOPHAN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 CO9 sing 70 n n 
C1 H11A CO9 sing 71 n n 
C1 H12 CO9 sing 72 n n 
C1 H13 CO9 sing 73 n n 
N1 C2 CO9 sing 74 n n 
N1 HN11 CO9 sing 75 n n 
N1 HN12 CO9 sing 76 n n 
O1 C5 CO9 doub 77 n n 
C2 C3 CO9 sing 78 n n 
C2 H2 CO9 sing 79 n n 
N2 C4 CO9 sing 80 n y 
N2 C3 CO9 doub 81 n y 
O2 C10 CO9 doub 82 n n 
C3 O5 CO9 sing 83 n y 
N3 C9 CO9 sing 84 n n 
N3 C6 CO9 sing 85 n n 
N3 C5 CO9 sing 86 n n 
O3 C21 CO9 sing 87 n n 
O3 HO3 CO9 sing 88 n n 
C4 C5 CO9 sing 89 n n 
C4 C22 CO9 doub 90 n y 
N4 C11 CO9 sing 91 n n 
N4 C10 CO9 sing 92 n n 
N4 HN4 CO9 sing 93 n n 
O4 C21 CO9 doub 94 n n 
N5 C14 CO9 sing 95 n y 
N5 C15 CO9 sing 96 n y 
N5 HN5 CO9 sing 97 n n 
O5 C22 CO9 sing 98 n y 
C6 C7 CO9 sing 99 n n 
C6 H61 CO9 sing 100 n n 
C6 H62 CO9 sing 101 n n 
C7 C8 CO9 sing 102 n n 
C7 H71 CO9 sing 103 n n 
C7 H72 CO9 sing 104 n n 
C8 C9 CO9 sing 105 n n 
C8 H81 CO9 sing 106 n n 
C8 H82 CO9 sing 107 n n 
C9 C10 CO9 sing 108 n n 
C9 H9 CO9 sing 109 n n 
C11 C21 CO9 sing 110 n n 
C11 C12 CO9 sing 111 n n 
C11 H11 CO9 sing 112 n n 
C12 C13 CO9 sing 113 n n 
C12 H121 CO9 sing 114 n n 
C12 H122 CO9 sing 115 n n 
C13 C14 CO9 doub 116 n y 
C13 C20 CO9 sing 117 n y 
C14 H14 CO9 sing 118 n n 
C15 C16 CO9 doub 119 n y 
C15 C20 CO9 sing 120 n y 
C16 C17 CO9 sing 121 n y 
C16 H16 CO9 sing 122 n n 
C17 C18 CO9 doub 123 n y 
C17 H17 CO9 sing 124 n n 
C18 C19 CO9 sing 125 n y 
C18 H18 CO9 sing 126 n n 
C19 C20 CO9 doub 127 n y 
C19 H19 CO9 sing 128 n n 
C22 H22 CO9 sing 129 n n 
#
_atom_sites.entry_id                     2OPY 
_atom_sites.fract_transf_matrix[1][1]    0.014045 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014045 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009515 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 102 102 ZN ZN . 
C 3 CO9 A 1 101 101 CO9 CO9 . 
D 4 HOH A 1 1 1 HOH TIP . 
D 4 HOH A 2 2 2 HOH TIP . 
D 4 HOH A 3 3 3 HOH TIP . 
D 4 HOH A 4 4 4 HOH TIP . 
D 4 HOH A 5 5 5 HOH TIP . 
D 4 HOH A 6 6 6 HOH TIP . 
D 4 HOH A 7 7 7 HOH TIP . 
D 4 HOH A 8 8 8 HOH TIP . 
D 4 HOH A 9 9 9 HOH TIP . 
D 4 HOH A 10 10 10 HOH TIP . 
D 4 HOH A 11 11 11 HOH TIP . 
D 4 HOH A 12 12 12 HOH TIP . 
D 4 HOH A 13 13 13 HOH TIP . 
D 4 HOH A 14 14 14 HOH TIP . 
D 4 HOH A 15 15 15 HOH TIP . 
D 4 HOH A 16 16 16 HOH TIP . 
D 4 HOH A 17 17 17 HOH TIP . 
D 4 HOH A 18 18 18 HOH TIP . 
D 4 HOH A 19 19 19 HOH TIP . 
D 4 HOH A 20 20 20 HOH TIP . 
D 4 HOH A 21 21 21 HOH TIP . 
D 4 HOH A 22 22 22 HOH TIP . 
D 4 HOH A 23 23 23 HOH TIP . 
D 4 HOH A 24 24 24 HOH TIP . 
D 4 HOH A 25 25 25 HOH TIP . 
D 4 HOH A 26 26 26 HOH TIP . 
D 4 HOH A 27 27 27 HOH TIP . 
D 4 HOH A 28 28 28 HOH TIP . 
D 4 HOH A 29 29 29 HOH TIP . 
D 4 HOH A 30 30 30 HOH TIP . 
D 4 HOH A 31 31 31 HOH TIP . 
D 4 HOH A 32 32 32 HOH TIP . 
D 4 HOH A 33 33 33 HOH TIP . 
D 4 HOH A 34 34 34 HOH TIP . 
D 4 HOH A 35 35 35 HOH TIP . 
D 4 HOH A 36 36 36 HOH TIP . 
D 4 HOH A 37 37 37 HOH TIP . 
D 4 HOH A 38 38 38 HOH TIP . 
D 4 HOH A 39 39 39 HOH TIP . 
D 4 HOH A 40 40 40 HOH TIP . 
D 4 HOH A 41 41 41 HOH TIP . 
D 4 HOH A 42 42 42 HOH TIP . 
D 4 HOH A 43 43 43 HOH TIP . 
D 4 HOH A 44 44 44 HOH TIP . 
D 4 HOH A 45 45 45 HOH TIP . 
D 4 HOH A 46 46 46 HOH TIP . 
D 4 HOH A 47 47 47 HOH TIP . 
D 4 HOH A 48 48 48 HOH TIP . 
D 4 HOH A 49 49 49 HOH TIP . 
D 4 HOH A 50 50 50 HOH TIP . 
D 4 HOH A 51 51 51 HOH TIP . 
D 4 HOH A 52 52 52 HOH TIP . 
D 4 HOH A 53 53 53 HOH TIP . 
D 4 HOH A 54 54 54 HOH TIP . 
D 4 HOH A 55 55 55 HOH TIP . 
D 4 HOH A 56 56 56 HOH TIP . 
D 4 HOH A 57 57 57 HOH TIP . 
D 4 HOH A 58 58 58 HOH TIP . 
D 4 HOH A 59 59 59 HOH TIP . 
D 4 HOH A 60 60 60 HOH TIP . 
D 4 HOH A 61 61 61 HOH TIP . 
D 4 HOH A 62 62 62 HOH TIP . 
D 4 HOH A 63 63 63 HOH TIP . 
D 4 HOH A 64 64 64 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CO9 . . . C 3 -16.013 -21.603 -0.507 1 51.76 ? C1 CO9 101 A 1 
HETATM 2 N N1 CO9 . . . C 3 -15.887 -19.2 0.077 1 52.71 ? N1 CO9 101 A 1 
HETATM 3 O O1 CO9 . . . C 3 -13.471 -19.85 -5.566 1 50.39 ? O1 CO9 101 A 1 
HETATM 4 C C2 CO9 . . . C 3 -15.391 -20.246 -0.821 1 50.99 ? C2 CO9 101 A 1 
HETATM 5 N N2 CO9 . . . C 3 -14.829 -19.979 -3.191 1 50.94 ? N2 CO9 101 A 1 
HETATM 6 O O2 CO9 . . . C 3 -13.66 -17.096 -7.497 1 60.02 ? O2 CO9 101 A 1 
HETATM 7 C C3 CO9 . . . C 3 -15.68 -19.877 -2.245 1 50.8 ? C3 CO9 101 A 1 
HETATM 8 N N3 CO9 . . . C 3 -15.203 -19.305 -6.867 1 53.27 ? N3 CO9 101 A 1 
HETATM 9 O O3 CO9 . . . C 3 -11.585 -16.36 -11.216 1 67.97 ? O3 CO9 101 A 1 
HETATM 10 C C4 CO9 . . . C 3 -15.387 -19.571 -4.342 1 50.16 ? C4 CO9 101 A 1 
HETATM 11 N N4 CO9 . . . C 3 -12.131 -18.417 -8.449 1 60.97 ? N4 CO9 101 A 1 
HETATM 12 O O4 CO9 . . . C 3 -11.871 -18.566 -11.219 1 68.65 ? O4 CO9 101 A 1 
HETATM 13 C C5 CO9 . . . C 3 -14.656 -19.57 -5.626 1 51.6 ? C5 CO9 101 A 1 
HETATM 14 N N5 CO9 . . . C 3 -8.205 -20.551 -10.391 1 63.53 ? N5 CO9 101 A 1 
HETATM 15 O O5 CO9 . . . C 3 -16.831 -19.399 -2.734 1 50.69 ? O5 CO9 101 A 1 
HETATM 16 C C6 CO9 . . . C 3 -16.621 -19.039 -7.224 1 53.39 ? C6 CO9 101 A 1 
HETATM 17 C C7 CO9 . . . C 3 -16.74 -19.434 -8.713 1 54.86 ? C7 CO9 101 A 1 
HETATM 18 C C8 CO9 . . . C 3 -15.383 -18.939 -9.271 1 54.72 ? C8 CO9 101 A 1 
HETATM 19 C C9 CO9 . . . C 3 -14.418 -19.246 -8.115 1 54.78 ? C9 CO9 101 A 1 
HETATM 20 C C10 CO9 . . . C 3 -13.378 -18.166 -8.011 1 57.74 ? C10 CO9 101 A 1 
HETATM 21 C C11 CO9 . . . C 3 -11.317 -17.386 -9.094 1 63.97 ? C11 CO9 101 A 1 
HETATM 22 C C12 CO9 . . . C 3 -9.806 -17.614 -8.786 1 63.8 ? C12 CO9 101 A 1 
HETATM 23 C C13 CO9 . . . C 3 -9.285 -18.984 -9.228 1 63.22 ? C13 CO9 101 A 1 
HETATM 24 C C14 CO9 . . . C 3 -8.475 -19.213 -10.28 1 63.22 ? C14 CO9 101 A 1 
HETATM 25 C C15 CO9 . . . C 3 -8.841 -21.249 -9.396 1 61.89 ? C15 CO9 101 A 1 
HETATM 26 C C16 CO9 . . . C 3 -8.899 -22.623 -9.057 1 61.63 ? C16 CO9 101 A 1 
HETATM 27 C C17 CO9 . . . C 3 -9.653 -23.039 -7.954 1 61.61 ? C17 CO9 101 A 1 
HETATM 28 C C18 CO9 . . . C 3 -10.36 -22.094 -7.174 1 61.68 ? C18 CO9 101 A 1 
HETATM 29 C C19 CO9 . . . C 3 -10.315 -20.74 -7.494 1 61.6 ? C19 CO9 101 A 1 
HETATM 30 C C20 CO9 . . . C 3 -9.556 -20.297 -8.609 1 61.74 ? C20 CO9 101 A 1 
HETATM 31 C C21 CO9 . . . C 3 -11.598 -17.397 -10.592 1 66.53 ? C21 CO9 101 A 1 
HETATM 32 C C22 CO9 . . . C 3 -16.663 -19.201 -4.05 1 49.56 ? C22 CO9 101 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           32 
#