data_2OQ1 # _model_server_result.job_id ekyExjZqZs5qJifEDObVXQ _model_server_result.datetime_utc '2025-02-05 17:03:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2oq1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1119}' # _entry.id 2OQ1 # _exptl.entry_id 2OQ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 207.2 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LEAD (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.44 _cell.angle_gamma 90 _cell.entry_id 2OQ1 _cell.length_a 50.11 _cell.length_b 63.37 _cell.length_c 54 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OQ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 26 A GLY 30 1_555 A N MSE 27 A MSE 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 27 A MSE 31 1_555 A N ALA 28 A ALA 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 A C ALA 119 A ALA 123 1_555 A N MSE 120 A MSE 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C MSE 120 A MSE 124 1_555 A N VAL 121 A VAL 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 A C ARG 158 A ARG 162 1_555 A N MSE 159 A MSE 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C MSE 159 A MSE 163 1_555 A N PRO 160 A PRO 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale7 B C LEU 3 B LEU 303 1_555 B N PTR 4 B PTR 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale8 B C PTR 4 B PTR 304 1_555 B N ASN 5 B ASN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale9 B C GLU 14 B GLU 314 1_555 B N PTR 15 B PTR 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale10 B C PTR 15 B PTR 315 1_555 B N ASP 16 B ASP 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? metalc ? metalc1 A SG CYS 115 A CYS 119 1_555 C PB PB . A PB 1119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.619 ? # _chem_comp.formula 'Pb 2' _chem_comp.formula_weight 207.2 _chem_comp.id PB _chem_comp.mon_nstd_flag . _chem_comp.name 'LEAD (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2OQ1 _atom_sites.fract_transf_matrix[1][1] 0.019956 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009069 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01578 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020341 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PB A 1 1119 1119 PB PB . D 4 HOH A 1 501 501 HOH HOH . D 4 HOH A 2 502 502 HOH HOH . D 4 HOH A 3 503 503 HOH HOH . D 4 HOH A 4 505 505 HOH HOH . D 4 HOH A 5 506 506 HOH HOH . D 4 HOH A 6 508 508 HOH HOH . D 4 HOH A 7 509 509 HOH HOH . D 4 HOH A 8 510 510 HOH HOH . D 4 HOH A 9 511 511 HOH HOH . D 4 HOH A 10 512 512 HOH HOH . D 4 HOH A 11 513 513 HOH HOH . D 4 HOH A 12 515 515 HOH HOH . D 4 HOH A 13 516 516 HOH HOH . D 4 HOH A 14 517 517 HOH HOH . D 4 HOH A 15 518 518 HOH HOH . D 4 HOH A 16 519 519 HOH HOH . D 4 HOH A 17 520 520 HOH HOH . D 4 HOH A 18 521 521 HOH HOH . D 4 HOH A 19 522 522 HOH HOH . D 4 HOH A 20 523 523 HOH HOH . D 4 HOH A 21 524 524 HOH HOH . D 4 HOH A 22 525 525 HOH HOH . D 4 HOH A 23 526 526 HOH HOH . D 4 HOH A 24 527 527 HOH HOH . D 4 HOH A 25 528 528 HOH HOH . D 4 HOH A 26 529 529 HOH HOH . D 4 HOH A 27 530 530 HOH HOH . D 4 HOH A 28 532 532 HOH HOH . D 4 HOH A 29 533 533 HOH HOH . D 4 HOH A 30 535 535 HOH HOH . D 4 HOH A 31 536 536 HOH HOH . D 4 HOH A 32 537 537 HOH HOH . D 4 HOH A 33 538 538 HOH HOH . D 4 HOH A 34 539 539 HOH HOH . D 4 HOH A 35 540 540 HOH HOH . D 4 HOH A 36 541 541 HOH HOH . D 4 HOH A 37 542 542 HOH HOH . D 4 HOH A 38 543 543 HOH HOH . D 4 HOH A 39 544 544 HOH HOH . D 4 HOH A 40 545 545 HOH HOH . D 4 HOH A 41 546 546 HOH HOH . D 4 HOH A 42 547 547 HOH HOH . D 4 HOH A 43 549 549 HOH HOH . D 4 HOH A 44 550 550 HOH HOH . D 4 HOH A 45 552 552 HOH HOH . D 4 HOH A 46 553 553 HOH HOH . D 4 HOH A 47 554 554 HOH HOH . D 4 HOH A 48 555 555 HOH HOH . D 4 HOH A 49 557 557 HOH HOH . D 4 HOH A 50 558 558 HOH HOH . D 4 HOH A 51 559 559 HOH HOH . D 4 HOH A 52 560 560 HOH HOH . D 4 HOH A 53 561 561 HOH HOH . D 4 HOH A 54 563 563 HOH HOH . D 4 HOH A 55 572 572 HOH HOH . D 4 HOH A 56 573 573 HOH HOH . D 4 HOH A 57 574 574 HOH HOH . D 4 HOH A 58 576 576 HOH HOH . D 4 HOH A 59 577 577 HOH HOH . D 4 HOH A 60 579 579 HOH HOH . D 4 HOH A 61 580 580 HOH HOH . D 4 HOH A 62 581 581 HOH HOH . D 4 HOH A 63 582 582 HOH HOH . D 4 HOH A 64 583 583 HOH HOH . D 4 HOH A 65 584 584 HOH HOH . D 4 HOH A 66 585 585 HOH HOH . D 4 HOH A 67 586 586 HOH HOH . D 4 HOH A 68 587 587 HOH HOH . D 4 HOH A 69 588 588 HOH HOH . D 4 HOH A 70 589 589 HOH HOH . D 4 HOH A 71 592 592 HOH HOH . D 4 HOH A 72 593 593 HOH HOH . D 4 HOH A 73 594 594 HOH HOH . D 4 HOH A 74 595 595 HOH HOH . D 4 HOH A 75 596 596 HOH HOH . D 4 HOH A 76 597 597 HOH HOH . D 4 HOH A 77 598 598 HOH HOH . D 4 HOH A 78 599 599 HOH HOH . D 4 HOH A 79 601 601 HOH HOH . D 4 HOH A 80 602 602 HOH HOH . D 4 HOH A 81 603 603 HOH HOH . D 4 HOH A 82 604 604 HOH HOH . D 4 HOH A 83 605 605 HOH HOH . D 4 HOH A 84 606 606 HOH HOH . D 4 HOH A 85 608 608 HOH HOH . D 4 HOH A 86 609 609 HOH HOH . D 4 HOH A 87 611 611 HOH HOH . D 4 HOH A 88 612 612 HOH HOH . D 4 HOH A 89 613 613 HOH HOH . D 4 HOH A 90 615 615 HOH HOH . D 4 HOH A 91 616 616 HOH HOH . D 4 HOH A 92 617 617 HOH HOH . D 4 HOH A 93 619 619 HOH HOH . D 4 HOH A 94 620 620 HOH HOH . D 4 HOH A 95 621 621 HOH HOH . D 4 HOH A 96 623 623 HOH HOH . D 4 HOH A 97 624 624 HOH HOH . D 4 HOH A 98 625 625 HOH HOH . D 4 HOH A 99 626 626 HOH HOH . D 4 HOH A 100 627 627 HOH HOH . E 4 HOH B 1 504 504 HOH HOH . E 4 HOH B 2 507 507 HOH HOH . E 4 HOH B 3 514 514 HOH HOH . E 4 HOH B 4 531 531 HOH HOH . E 4 HOH B 5 534 534 HOH HOH . E 4 HOH B 6 551 551 HOH HOH . E 4 HOH B 7 556 556 HOH HOH . E 4 HOH B 8 569 569 HOH HOH . E 4 HOH B 9 570 570 HOH HOH . E 4 HOH B 10 575 575 HOH HOH . E 4 HOH B 11 610 610 HOH HOH . E 4 HOH B 12 614 614 HOH HOH . E 4 HOH B 13 618 618 HOH HOH . E 4 HOH B 14 622 622 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol PB _atom_site.label_atom_id PB _atom_site.label_comp_id PB _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 1.471 _atom_site.Cartn_y -9.618 _atom_site.Cartn_z 49.82 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.74 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id PB _atom_site.auth_comp_id PB _atom_site.auth_seq_id 1119 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #