data_2ORQ # _model_server_result.job_id uSNik4Zab75Jgdl0mR0ziA _model_server_result.datetime_utc '2024-11-24 05:39:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2orq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 2ORQ # _exptl.entry_id 2ORQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 151.163 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(1,3-BENZODIOXOL-5-YL)METHANAMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ORQ _cell.length_a 62.99 _cell.length_b 74.17 _cell.length_c 92.68 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ORQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_546 x+1/2,-y-1/2,-z+1 1 0 0 0 -1 0 0 0 -1 31.495 -37.085 92.68 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 81 A CYS 194 1_555 B FE HEM . A HEM 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc2 B FE HEM . A HEM 600 1_555 C NFE MSR . A MSR 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? # _chem_comp.formula 'C8 H9 N O2' _chem_comp.formula_weight 151.163 _chem_comp.id MR1 _chem_comp.mon_nstd_flag . _chem_comp.name 1-(1,3-BENZODIOXOL-5-YL)METHANAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C36 C35 MR1 doub 319 n y C36 C31 MR1 sing 320 n y C36 H36 MR1 sing 321 n n C35 O39 MR1 sing 322 n n C35 C34 MR1 sing 323 n y O39 C38 MR1 sing 324 n n C38 O37 MR1 sing 325 n n C38 H381 MR1 sing 326 n n C38 H382 MR1 sing 327 n n O37 C34 MR1 sing 328 n n C34 C33 MR1 doub 329 n y C33 C32 MR1 sing 330 n y C33 H33 MR1 sing 331 n n C32 C31 MR1 doub 332 n y C32 H32 MR1 sing 333 n n C31 C30 MR1 sing 334 n n C30 N MR1 sing 335 n n C30 H301 MR1 sing 336 n n C30 H302 MR1 sing 337 n n N HN1 MR1 sing 338 n n N HN2 MR1 sing 339 n n # _atom_sites.entry_id 2ORQ _atom_sites.fract_transf_matrix[1][1] 0.015876 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013483 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01079 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 600 600 HEM HEM . C 3 MSR A 1 601 601 MSR MSR . D 4 MR1 A 1 602 602 MR1 MR1 . E 5 HOH A 1 603 603 HOH HOH . E 5 HOH A 2 604 604 HOH HOH . E 5 HOH A 3 605 605 HOH HOH . E 5 HOH A 4 606 606 HOH HOH . E 5 HOH A 5 609 609 HOH HOH . E 5 HOH A 6 610 610 HOH HOH . E 5 HOH A 7 611 611 HOH HOH . E 5 HOH A 8 612 612 HOH HOH . E 5 HOH A 9 616 616 HOH HOH . E 5 HOH A 10 619 619 HOH HOH . E 5 HOH A 11 620 620 HOH HOH . E 5 HOH A 12 623 623 HOH HOH . E 5 HOH A 13 625 625 HOH HOH . E 5 HOH A 14 626 626 HOH HOH . E 5 HOH A 15 628 628 HOH HOH . E 5 HOH A 16 629 629 HOH HOH . E 5 HOH A 17 630 630 HOH HOH . E 5 HOH A 18 632 632 HOH HOH . E 5 HOH A 19 633 633 HOH HOH . E 5 HOH A 20 634 634 HOH HOH . E 5 HOH A 21 635 635 HOH HOH . E 5 HOH A 22 637 637 HOH HOH . E 5 HOH A 23 644 644 HOH HOH . E 5 HOH A 24 645 645 HOH HOH . E 5 HOH A 25 646 646 HOH HOH . E 5 HOH A 26 649 649 HOH HOH . E 5 HOH A 27 650 650 HOH HOH . E 5 HOH A 28 653 653 HOH HOH . E 5 HOH A 29 654 654 HOH HOH . E 5 HOH A 30 656 656 HOH HOH . E 5 HOH A 31 657 657 HOH HOH . E 5 HOH A 32 661 661 HOH HOH . E 5 HOH A 33 665 665 HOH HOH . E 5 HOH A 34 667 667 HOH HOH . E 5 HOH A 35 672 672 HOH HOH . E 5 HOH A 36 673 673 HOH HOH . E 5 HOH A 37 676 676 HOH HOH . E 5 HOH A 38 677 677 HOH HOH . E 5 HOH A 39 684 684 HOH HOH . E 5 HOH A 40 689 689 HOH HOH . E 5 HOH A 41 690 690 HOH HOH . E 5 HOH A 42 711 711 HOH HOH . E 5 HOH A 43 713 713 HOH HOH . E 5 HOH A 44 714 714 HOH HOH . E 5 HOH A 45 720 720 HOH HOH . E 5 HOH A 46 721 721 HOH HOH . E 5 HOH A 47 723 723 HOH HOH . E 5 HOH A 48 724 724 HOH HOH . E 5 HOH A 49 725 725 HOH HOH . E 5 HOH A 50 731 731 HOH HOH . E 5 HOH A 51 734 734 HOH HOH . E 5 HOH A 52 738 738 HOH HOH . E 5 HOH A 53 739 739 HOH HOH . E 5 HOH A 54 740 740 HOH HOH . E 5 HOH A 55 742 742 HOH HOH . E 5 HOH A 56 743 743 HOH HOH . E 5 HOH A 57 746 746 HOH HOH . E 5 HOH A 58 749 749 HOH HOH . E 5 HOH A 59 752 752 HOH HOH . E 5 HOH A 60 759 759 HOH HOH . E 5 HOH A 61 760 760 HOH HOH . E 5 HOH A 62 761 761 HOH HOH . E 5 HOH A 63 766 766 HOH HOH . E 5 HOH A 64 768 768 HOH HOH . E 5 HOH A 65 769 769 HOH HOH . E 5 HOH A 66 771 771 HOH HOH . E 5 HOH A 67 773 773 HOH HOH . E 5 HOH A 68 775 775 HOH HOH . E 5 HOH A 69 779 779 HOH HOH . E 5 HOH A 70 787 787 HOH HOH . E 5 HOH A 71 788 788 HOH HOH . E 5 HOH A 72 789 789 HOH HOH . E 5 HOH A 73 792 792 HOH HOH . E 5 HOH A 74 794 794 HOH HOH . E 5 HOH A 75 795 795 HOH HOH . E 5 HOH A 76 796 796 HOH HOH . E 5 HOH A 77 804 804 HOH HOH . E 5 HOH A 78 805 805 HOH HOH . E 5 HOH A 79 809 809 HOH HOH . E 5 HOH A 80 810 810 HOH HOH . E 5 HOH A 81 812 812 HOH HOH . E 5 HOH A 82 819 819 HOH HOH . E 5 HOH A 83 823 823 HOH HOH . E 5 HOH A 84 825 825 HOH HOH . E 5 HOH A 85 832 832 HOH HOH . E 5 HOH A 86 855 855 HOH HOH . E 5 HOH A 87 1007 1007 HOH HOH . E 5 HOH A 88 1008 1008 HOH HOH . E 5 HOH A 89 1018 1018 HOH HOH . E 5 HOH A 90 1024 1024 HOH HOH . E 5 HOH A 91 1030 1030 HOH HOH . E 5 HOH A 92 1031 1031 HOH HOH . E 5 HOH A 93 1038 1038 HOH HOH . E 5 HOH A 94 1047 1047 HOH HOH . E 5 HOH A 95 1052 1052 HOH HOH . E 5 HOH A 96 1058 1058 HOH HOH . E 5 HOH A 97 1063 1063 HOH HOH . E 5 HOH A 98 1069 1069 HOH HOH . E 5 HOH A 99 1080 1080 HOH HOH . E 5 HOH A 100 1099 1099 HOH HOH . E 5 HOH A 101 1106 1106 HOH HOH . E 5 HOH A 102 1108 1108 HOH HOH . E 5 HOH A 103 1110 1110 HOH HOH . E 5 HOH A 104 1112 1112 HOH HOH . E 5 HOH A 105 1119 1119 HOH HOH . E 5 HOH A 106 1128 1128 HOH HOH . E 5 HOH A 107 1133 1133 HOH HOH . E 5 HOH A 108 1145 1145 HOH HOH . E 5 HOH A 109 1148 1148 HOH HOH . E 5 HOH A 110 1157 1157 HOH HOH . E 5 HOH A 111 1164 1164 HOH HOH . E 5 HOH A 112 1165 1165 HOH HOH . E 5 HOH A 113 1176 1176 HOH HOH . E 5 HOH A 114 1186 1186 HOH HOH . E 5 HOH A 115 1190 1190 HOH HOH . E 5 HOH A 116 1191 1191 HOH HOH . E 5 HOH A 117 1202 1202 HOH HOH . E 5 HOH A 118 1205 1205 HOH HOH . E 5 HOH A 119 1211 1211 HOH HOH . E 5 HOH A 120 1213 1213 HOH HOH . E 5 HOH A 121 1215 1215 HOH HOH . E 5 HOH A 122 1216 1216 HOH HOH . E 5 HOH A 123 1217 1217 HOH HOH . E 5 HOH A 124 1236 1236 HOH HOH . E 5 HOH A 125 1245 1245 HOH HOH . E 5 HOH A 126 1258 1258 HOH HOH . E 5 HOH A 127 1260 1260 HOH HOH . E 5 HOH A 128 1300 1300 HOH HOH . E 5 HOH A 129 1303 1303 HOH HOH . E 5 HOH A 130 1304 1304 HOH HOH . E 5 HOH A 131 1305 1305 HOH HOH . E 5 HOH A 132 1307 1307 HOH HOH . E 5 HOH A 133 1308 1308 HOH HOH . E 5 HOH A 134 1309 1309 HOH HOH . E 5 HOH A 135 1310 1310 HOH HOH . E 5 HOH A 136 1311 1311 HOH HOH . E 5 HOH A 137 1312 1312 HOH HOH . E 5 HOH A 138 1313 1313 HOH HOH . E 5 HOH A 139 1315 1315 HOH HOH . E 5 HOH A 140 1316 1316 HOH HOH . E 5 HOH A 141 1318 1318 HOH HOH . E 5 HOH A 142 1320 1320 HOH HOH . E 5 HOH A 143 1321 1321 HOH HOH . E 5 HOH A 144 1322 1322 HOH HOH . E 5 HOH A 145 1323 1323 HOH HOH . E 5 HOH A 146 1327 1327 HOH HOH . E 5 HOH A 147 1328 1328 HOH HOH . E 5 HOH A 148 1333 1333 HOH HOH . E 5 HOH A 149 1334 1334 HOH HOH . E 5 HOH A 150 1336 1336 HOH HOH . E 5 HOH A 151 1337 1337 HOH HOH . E 5 HOH A 152 1338 1338 HOH HOH . E 5 HOH A 153 1339 1339 HOH HOH . E 5 HOH A 154 1342 1342 HOH HOH . E 5 HOH A 155 1343 1343 HOH HOH . E 5 HOH A 156 1344 1344 HOH HOH . E 5 HOH A 157 1345 1345 HOH HOH . E 5 HOH A 158 1346 1346 HOH HOH . E 5 HOH A 159 1347 1347 HOH HOH . E 5 HOH A 160 1352 1352 HOH HOH . E 5 HOH A 161 1353 1353 HOH HOH . E 5 HOH A 162 1355 1355 HOH HOH . E 5 HOH A 163 1358 1358 HOH HOH . E 5 HOH A 164 1359 1359 HOH HOH . E 5 HOH A 165 1361 1361 HOH HOH . E 5 HOH A 166 1363 1363 HOH HOH . E 5 HOH A 167 1366 1366 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C36 MR1 . B . D 4 70.806 -4.8 51.098 0.5 73.28 ? C36 MR1 602 A 1 HETATM 2 C C35 MR1 . B . D 4 69.532 -4.669 51.682 0.5 72.01 ? C35 MR1 602 A 1 HETATM 3 O O39 MR1 . B . D 4 68.571 -5.593 51.948 0.5 71.11 ? O39 MR1 602 A 1 HETATM 4 C C38 MR1 . B . D 4 67.622 -4.939 52.805 0.5 69.52 ? C38 MR1 602 A 1 HETATM 5 O O37 MR1 . B . D 4 67.828 -3.531 52.617 0.5 72.21 ? O37 MR1 602 A 1 HETATM 6 C C34 MR1 . B . D 4 69.066 -3.4 52.068 0.5 72.25 ? C34 MR1 602 A 1 HETATM 7 C C33 MR1 . B . D 4 69.875 -2.265 51.863 0.5 72.79 ? C33 MR1 602 A 1 HETATM 8 C C32 MR1 . B . D 4 71.148 -2.398 51.279 0.5 73.64 ? C32 MR1 602 A 1 HETATM 9 C C31 MR1 . B . D 4 71.613 -3.668 50.898 0.5 74.23 ? C31 MR1 602 A 1 HETATM 10 C C30 MR1 . B . D 4 73.006 -3.822 50.283 0.5 75.38 ? C30 MR1 602 A 1 HETATM 11 N N MR1 . B . D 4 72.884 -4.039 48.833 0.5 76.76 ? N MR1 602 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 220 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #