data_2ORS # _model_server_result.job_id -4jcvN5-dt_pD9yLfemCnA _model_server_result.datetime_utc '2024-11-15 00:35:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ors # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":600}' # _entry.id 2ORS # _exptl.entry_id 2ORS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ORS _cell.length_a 63.581 _cell.length_b 74.857 _cell.length_c 93.775 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ORS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_546 x+1/2,-y-1/2,-z+1 1 0 0 0 -1 0 0 0 -1 31.7905 -37.4285 93.775 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 81 A CYS 194 1_555 B FE HEM . A HEM 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc2 B FE HEM . A HEM 600 1_555 C NFE 391 . A 391 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 187 n n CHA C4D HEM doub 188 n n CHA HHA HEM sing 189 n n CHB C4A HEM sing 190 n n CHB C1B HEM doub 191 n n CHB HHB HEM sing 192 n n CHC C4B HEM sing 193 n n CHC C1C HEM doub 194 n n CHC HHC HEM sing 195 n n CHD C4C HEM doub 196 n n CHD C1D HEM sing 197 n n CHD HHD HEM sing 198 n n C1A C2A HEM doub 199 n y C1A NA HEM sing 200 n y C2A C3A HEM sing 201 n y C2A CAA HEM sing 202 n n C3A C4A HEM doub 203 n y C3A CMA HEM sing 204 n n C4A NA HEM sing 205 n y CMA HMA HEM sing 206 n n CMA HMAA HEM sing 207 n n CMA HMAB HEM sing 208 n n CAA CBA HEM sing 209 n n CAA HAA HEM sing 210 n n CAA HAAA HEM sing 211 n n CBA CGA HEM sing 212 n n CBA HBA HEM sing 213 n n CBA HBAA HEM sing 214 n n CGA O1A HEM doub 215 n n CGA O2A HEM sing 216 n n C1B C2B HEM sing 217 n n C1B NB HEM sing 218 n n C2B C3B HEM doub 219 n n C2B CMB HEM sing 220 n n C3B C4B HEM sing 221 n n C3B CAB HEM sing 222 n n C4B NB HEM doub 223 n n CMB HMB HEM sing 224 n n CMB HMBA HEM sing 225 n n CMB HMBB HEM sing 226 n n CAB CBB HEM doub 227 n n CAB HAB HEM sing 228 n n CBB HBB HEM sing 229 n n CBB HBBA HEM sing 230 n n C1C C2C HEM sing 231 n y C1C NC HEM sing 232 n y C2C C3C HEM doub 233 n y C2C CMC HEM sing 234 n n C3C C4C HEM sing 235 n y C3C CAC HEM sing 236 n n C4C NC HEM sing 237 n y CMC HMC HEM sing 238 n n CMC HMCA HEM sing 239 n n CMC HMCB HEM sing 240 n n CAC CBC HEM doub 241 n n CAC HAC HEM sing 242 n n CBC HBC HEM sing 243 n n CBC HBCA HEM sing 244 n n C1D C2D HEM sing 245 n n C1D ND HEM doub 246 n n C2D C3D HEM doub 247 n n C2D CMD HEM sing 248 n n C3D C4D HEM sing 249 n n C3D CAD HEM sing 250 n n C4D ND HEM sing 251 n n CMD HMD HEM sing 252 n n CMD HMDA HEM sing 253 n n CMD HMDB HEM sing 254 n n CAD CBD HEM sing 255 n n CAD HAD HEM sing 256 n n CAD HADA HEM sing 257 n n CBD CGD HEM sing 258 n n CBD HBD HEM sing 259 n n CBD HBDA HEM sing 260 n n CGD O1D HEM doub 261 n n CGD O2D HEM sing 262 n n O2A H2A HEM sing 263 n n O2D H2D HEM sing 264 n n FE NA HEM sing 265 n n FE NB HEM sing 266 n n FE NC HEM sing 267 n n FE ND HEM sing 268 n n # _atom_sites.entry_id 2ORS _atom_sites.fract_transf_matrix[1][1] 0.015728 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013359 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010664 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 600 600 HEM HEM . C 3 391 A 1 601 601 391 391 . D 4 EDO A 1 602 602 EDO EGL . E 4 EDO A 1 603 603 EDO EGL . F 4 EDO A 1 604 604 EDO EGL . G 4 EDO A 1 605 605 EDO EGL . H 4 EDO A 1 606 606 EDO EGL . I 4 EDO A 1 607 607 EDO EGL . J 5 HOH A 1 608 608 HOH HOH . J 5 HOH A 2 609 609 HOH HOH . J 5 HOH A 3 610 610 HOH HOH . J 5 HOH A 4 611 611 HOH HOH . J 5 HOH A 5 612 612 HOH HOH . J 5 HOH A 6 614 614 HOH HOH . J 5 HOH A 7 619 619 HOH HOH . J 5 HOH A 8 620 620 HOH HOH . J 5 HOH A 9 623 623 HOH HOH . J 5 HOH A 10 625 625 HOH HOH . J 5 HOH A 11 626 626 HOH HOH . J 5 HOH A 12 628 628 HOH HOH . J 5 HOH A 13 629 629 HOH HOH . J 5 HOH A 14 630 630 HOH HOH . J 5 HOH A 15 632 632 HOH HOH . J 5 HOH A 16 633 633 HOH HOH . J 5 HOH A 17 634 634 HOH HOH . J 5 HOH A 18 635 635 HOH HOH . J 5 HOH A 19 637 637 HOH HOH . J 5 HOH A 20 639 639 HOH HOH . J 5 HOH A 21 641 641 HOH HOH . J 5 HOH A 22 644 644 HOH HOH . J 5 HOH A 23 645 645 HOH HOH . J 5 HOH A 24 648 648 HOH HOH . J 5 HOH A 25 649 649 HOH HOH . J 5 HOH A 26 650 650 HOH HOH . J 5 HOH A 27 654 654 HOH HOH . J 5 HOH A 28 656 656 HOH HOH . J 5 HOH A 29 657 657 HOH HOH . J 5 HOH A 30 661 661 HOH HOH . J 5 HOH A 31 665 665 HOH HOH . J 5 HOH A 32 667 667 HOH HOH . J 5 HOH A 33 672 672 HOH HOH . J 5 HOH A 34 673 673 HOH HOH . J 5 HOH A 35 676 676 HOH HOH . J 5 HOH A 36 677 677 HOH HOH . J 5 HOH A 37 678 678 HOH HOH . J 5 HOH A 38 684 684 HOH HOH . J 5 HOH A 39 689 689 HOH HOH . J 5 HOH A 40 690 690 HOH HOH . J 5 HOH A 41 691 691 HOH HOH . J 5 HOH A 42 699 699 HOH HOH . J 5 HOH A 43 702 702 HOH HOH . J 5 HOH A 44 711 711 HOH HOH . J 5 HOH A 45 713 713 HOH HOH . J 5 HOH A 46 714 714 HOH HOH . J 5 HOH A 47 721 721 HOH HOH . J 5 HOH A 48 723 723 HOH HOH . J 5 HOH A 49 725 725 HOH HOH . J 5 HOH A 50 730 730 HOH HOH . J 5 HOH A 51 731 731 HOH HOH . J 5 HOH A 52 734 734 HOH HOH . J 5 HOH A 53 739 739 HOH HOH . J 5 HOH A 54 740 740 HOH HOH . J 5 HOH A 55 743 743 HOH HOH . J 5 HOH A 56 746 746 HOH HOH . J 5 HOH A 57 749 749 HOH HOH . J 5 HOH A 58 752 752 HOH HOH . J 5 HOH A 59 759 759 HOH HOH . J 5 HOH A 60 760 760 HOH HOH . J 5 HOH A 61 761 761 HOH HOH . J 5 HOH A 62 766 766 HOH HOH . J 5 HOH A 63 768 768 HOH HOH . J 5 HOH A 64 769 769 HOH HOH . J 5 HOH A 65 771 771 HOH HOH . J 5 HOH A 66 773 773 HOH HOH . J 5 HOH A 67 775 775 HOH HOH . J 5 HOH A 68 779 779 HOH HOH . J 5 HOH A 69 787 787 HOH HOH . J 5 HOH A 70 789 789 HOH HOH . J 5 HOH A 71 792 792 HOH HOH . J 5 HOH A 72 793 793 HOH HOH . J 5 HOH A 73 796 796 HOH HOH . J 5 HOH A 74 797 797 HOH HOH . J 5 HOH A 75 805 805 HOH HOH . J 5 HOH A 76 819 819 HOH HOH . J 5 HOH A 77 823 823 HOH HOH . J 5 HOH A 78 825 825 HOH HOH . J 5 HOH A 79 832 832 HOH HOH . J 5 HOH A 80 835 835 HOH HOH . J 5 HOH A 81 841 841 HOH HOH . J 5 HOH A 82 847 847 HOH HOH . J 5 HOH A 83 855 855 HOH HOH . J 5 HOH A 84 1007 1007 HOH HOH . J 5 HOH A 85 1008 1008 HOH HOH . J 5 HOH A 86 1024 1024 HOH HOH . J 5 HOH A 87 1031 1031 HOH HOH . J 5 HOH A 88 1038 1038 HOH HOH . J 5 HOH A 89 1047 1047 HOH HOH . J 5 HOH A 90 1063 1063 HOH HOH . J 5 HOH A 91 1064 1064 HOH HOH . J 5 HOH A 92 1069 1069 HOH HOH . J 5 HOH A 93 1075 1075 HOH HOH . J 5 HOH A 94 1076 1076 HOH HOH . J 5 HOH A 95 1106 1106 HOH HOH . J 5 HOH A 96 1110 1110 HOH HOH . J 5 HOH A 97 1112 1112 HOH HOH . J 5 HOH A 98 1119 1119 HOH HOH . J 5 HOH A 99 1138 1138 HOH HOH . J 5 HOH A 100 1145 1145 HOH HOH . J 5 HOH A 101 1151 1151 HOH HOH . J 5 HOH A 102 1157 1157 HOH HOH . J 5 HOH A 103 1165 1165 HOH HOH . J 5 HOH A 104 1176 1176 HOH HOH . J 5 HOH A 105 1186 1186 HOH HOH . J 5 HOH A 106 1191 1191 HOH HOH . J 5 HOH A 107 1202 1202 HOH HOH . J 5 HOH A 108 1205 1205 HOH HOH . J 5 HOH A 109 1213 1213 HOH HOH . J 5 HOH A 110 1216 1216 HOH HOH . J 5 HOH A 111 1252 1252 HOH HOH . J 5 HOH A 112 1264 1264 HOH HOH . J 5 HOH A 113 1287 1287 HOH HOH . J 5 HOH A 114 1296 1296 HOH HOH . J 5 HOH A 115 1303 1303 HOH HOH . J 5 HOH A 116 1304 1304 HOH HOH . J 5 HOH A 117 1305 1305 HOH HOH . J 5 HOH A 118 1306 1306 HOH HOH . J 5 HOH A 119 1307 1307 HOH HOH . J 5 HOH A 120 1308 1308 HOH HOH . J 5 HOH A 121 1309 1309 HOH HOH . J 5 HOH A 122 1310 1310 HOH HOH . J 5 HOH A 123 1311 1311 HOH HOH . J 5 HOH A 124 1312 1312 HOH HOH . J 5 HOH A 125 1313 1313 HOH HOH . J 5 HOH A 126 1314 1314 HOH HOH . J 5 HOH A 127 1315 1315 HOH HOH . J 5 HOH A 128 1316 1316 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . B 2 71.941 -10.083 55.927 1 32.1 ? CHA HEM 600 A 1 HETATM 2 C CHB HEM . . . B 2 68.853 -6.494 57.006 1 32.19 ? CHB HEM 600 A 1 HETATM 3 C CHC HEM . . . B 2 65.116 -9.627 56.778 1 30.56 ? CHC HEM 600 A 1 HETATM 4 C CHD HEM . . . B 2 68.321 -13.276 56.543 1 29.05 ? CHD HEM 600 A 1 HETATM 5 C C1A HEM . . . B 2 71.405 -8.816 56.19 1 35.1 ? C1A HEM 600 A 1 HETATM 6 C C2A HEM . . . B 2 72.153 -7.564 56.155 1 35.75 ? C2A HEM 600 A 1 HETATM 7 C C3A HEM . . . B 2 71.283 -6.571 56.468 1 35.92 ? C3A HEM 600 A 1 HETATM 8 C C4A HEM . . . B 2 69.995 -7.201 56.693 1 34.26 ? C4A HEM 600 A 1 HETATM 9 C CMA HEM . . . B 2 71.579 -5.071 56.568 1 32.48 ? CMA HEM 600 A 1 HETATM 10 C CAA HEM . . . B 2 73.628 -7.369 55.818 1 40.21 ? CAA HEM 600 A 1 HETATM 11 C CBA HEM . . . B 2 73.805 -7.294 54.315 1 47.75 ? CBA HEM 600 A 1 HETATM 12 C CGA HEM . . . B 2 75.125 -6.67 53.915 1 55.22 ? CGA HEM 600 A 1 HETATM 13 O O1A HEM . . . B 2 75.109 -5.706 53.118 1 58.71 ? O1A HEM 600 A 1 HETATM 14 O O2A HEM . . . B 2 76.177 -7.143 54.396 1 57.99 ? O2A HEM 600 A 1 HETATM 15 C C1B HEM . . . B 2 67.573 -7.052 57.06 1 33.33 ? C1B HEM 600 A 1 HETATM 16 C C2B HEM . . . B 2 66.393 -6.256 57.205 1 34.07 ? C2B HEM 600 A 1 HETATM 17 C C3B HEM . . . B 2 65.344 -7.096 57.125 1 32.09 ? C3B HEM 600 A 1 HETATM 18 C C4B HEM . . . B 2 65.876 -8.449 56.943 1 32.49 ? C4B HEM 600 A 1 HETATM 19 C CMB HEM . . . B 2 66.343 -4.726 57.36 1 34.64 ? CMB HEM 600 A 1 HETATM 20 C CAB HEM . . . B 2 64.04 -6.654 57.073 1 32.46 ? CAB HEM 600 A 1 HETATM 21 C CBB HEM . . . B 2 62.939 -7.204 57.804 1 30.37 ? CBB HEM 600 A 1 HETATM 22 C C1C HEM . . . B 2 65.677 -10.904 56.627 1 30.41 ? C1C HEM 600 A 1 HETATM 23 C C2C HEM . . . B 2 64.908 -12.14 56.586 1 26.69 ? C2C HEM 600 A 1 HETATM 24 C C3C HEM . . . B 2 65.802 -13.164 56.603 1 26.19 ? C3C HEM 600 A 1 HETATM 25 C C4C HEM . . . B 2 67.13 -12.55 56.615 1 28.79 ? C4C HEM 600 A 1 HETATM 26 C CMC HEM . . . B 2 63.382 -12.214 56.526 1 23.6 ? CMC HEM 600 A 1 HETATM 27 C CAC HEM . . . B 2 65.575 -14.55 56.571 1 23.96 ? CAC HEM 600 A 1 HETATM 28 C CBC HEM . . . B 2 64.364 -15.222 57.018 1 24.12 ? CBC HEM 600 A 1 HETATM 29 C C1D HEM . . . B 2 69.577 -12.719 56.33 1 29.49 ? C1D HEM 600 A 1 HETATM 30 C C2D HEM . . . B 2 70.793 -13.503 56.078 1 28.7 ? C2D HEM 600 A 1 HETATM 31 C C3D HEM . . . B 2 71.779 -12.603 55.866 1 28.47 ? C3D HEM 600 A 1 HETATM 32 C C4D HEM . . . B 2 71.19 -11.271 55.967 1 29.94 ? C4D HEM 600 A 1 HETATM 33 C CMD HEM . . . B 2 70.954 -15.041 56.115 1 21.94 ? CMD HEM 600 A 1 HETATM 34 C CAD HEM . . . B 2 73.279 -12.904 55.767 1 32.73 ? CAD HEM 600 A 1 HETATM 35 C CBD HEM . . . B 2 73.837 -12.999 57.191 1 39.02 ? CBD HEM 600 A 1 HETATM 36 C CGD HEM . . . B 2 75.348 -13.176 57.234 1 42.76 ? CGD HEM 600 A 1 HETATM 37 O O1D HEM . . . B 2 75.942 -12.893 58.296 1 44.43 ? O1D HEM 600 A 1 HETATM 38 O O2D HEM . . . B 2 75.942 -13.596 56.214 1 41.77 ? O2D HEM 600 A 1 HETATM 39 N NA HEM . . . B 2 70.059 -8.579 56.496 1 33.8 ? NA HEM 600 A 1 HETATM 40 N NB HEM . . . B 2 67.259 -8.398 56.881 1 33.32 ? NB HEM 600 A 1 HETATM 41 N NC HEM . . . B 2 67.043 -11.164 56.61 1 31.44 ? NC HEM 600 A 1 HETATM 42 N ND HEM . . . B 2 69.829 -11.349 56.259 1 31.59 ? ND HEM 600 A 1 HETATM 43 FE FE HEM . . . B 2 68.535 -9.869 56.568 1 32.01 ? FE HEM 600 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 228 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 43 #