data_2OT9 # _model_server_result.job_id QVCbBILemH-SATE7EPFF8A _model_server_result.datetime_utc '2025-08-02 21:46:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ot9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 2OT9 # _exptl.entry_id 2OT9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'S,R MESO-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2OT9 _cell.length_a 40.311 _cell.length_b 61.405 _cell.length_c 77.828 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OT9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 39 A ARG 39 1_555 A N MSE 40 A MSE 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C MSE 40 A MSE 40 1_555 A N THR 41 A THR 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C ASP 143 A ASP 143 1_555 A N MSE 144 A MSE 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale4 A C MSE 144 A MSE 144 1_555 A N PRO 145 A PRO 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale5 A C VAL 152 A VAL 152 1_555 A N MSE 153 A MSE 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C MSE 153 A MSE 153 1_555 A N ILE 154 A ILE 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id SRT _chem_comp.mon_nstd_flag . _chem_comp.name 'S,R MESO-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 SRT sing 309 n n O1 H1 SRT sing 310 n n O11 C1 SRT doub 311 n n C1 C2 SRT sing 312 n n C2 O2 SRT sing 313 n n C2 C3 SRT sing 314 n n C2 H2 SRT sing 315 n n O2 HA SRT sing 316 n n C3 O3 SRT sing 317 n n C3 C4 SRT sing 318 n n C3 H3 SRT sing 319 n n O3 HB SRT sing 320 n n C4 O4 SRT doub 321 n n C4 O41 SRT sing 322 n n O41 H41 SRT sing 323 n n # _atom_sites.entry_id 2OT9 _atom_sites.fract_transf_matrix[1][1] 0.024807 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016285 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012849 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 181 1 NA NA . C 3 SRT A 1 201 1 SRT SRT . D 4 HOH A 1 202 2 HOH HOH . D 4 HOH A 2 203 3 HOH HOH . D 4 HOH A 3 204 4 HOH HOH . D 4 HOH A 4 205 5 HOH HOH . D 4 HOH A 5 206 6 HOH HOH . D 4 HOH A 6 207 7 HOH HOH . D 4 HOH A 7 208 8 HOH HOH . D 4 HOH A 8 209 9 HOH HOH . D 4 HOH A 9 210 10 HOH HOH . D 4 HOH A 10 211 11 HOH HOH . D 4 HOH A 11 212 12 HOH HOH . D 4 HOH A 12 213 13 HOH HOH . D 4 HOH A 13 214 14 HOH HOH . D 4 HOH A 14 215 15 HOH HOH . D 4 HOH A 15 216 16 HOH HOH . D 4 HOH A 16 217 17 HOH HOH . D 4 HOH A 17 218 18 HOH HOH . D 4 HOH A 18 219 19 HOH HOH . D 4 HOH A 19 220 20 HOH HOH . D 4 HOH A 20 221 21 HOH HOH . D 4 HOH A 21 222 22 HOH HOH . D 4 HOH A 22 223 23 HOH HOH . D 4 HOH A 23 224 24 HOH HOH . D 4 HOH A 24 225 25 HOH HOH . D 4 HOH A 25 226 26 HOH HOH . D 4 HOH A 26 227 27 HOH HOH . D 4 HOH A 27 228 28 HOH HOH . D 4 HOH A 28 229 29 HOH HOH . D 4 HOH A 29 230 30 HOH HOH . D 4 HOH A 30 231 31 HOH HOH . D 4 HOH A 31 232 32 HOH HOH . D 4 HOH A 32 233 33 HOH HOH . D 4 HOH A 33 234 34 HOH HOH . D 4 HOH A 34 235 35 HOH HOH . D 4 HOH A 35 236 36 HOH HOH . D 4 HOH A 36 237 37 HOH HOH . D 4 HOH A 37 238 38 HOH HOH . D 4 HOH A 38 239 39 HOH HOH . D 4 HOH A 39 240 41 HOH HOH . D 4 HOH A 40 241 42 HOH HOH . D 4 HOH A 41 242 43 HOH HOH . D 4 HOH A 42 243 44 HOH HOH . D 4 HOH A 43 244 45 HOH HOH . D 4 HOH A 44 245 46 HOH HOH . D 4 HOH A 45 246 48 HOH HOH . D 4 HOH A 46 247 49 HOH HOH . D 4 HOH A 47 248 50 HOH HOH . D 4 HOH A 48 249 51 HOH HOH . D 4 HOH A 49 250 52 HOH HOH . D 4 HOH A 50 251 53 HOH HOH . D 4 HOH A 51 252 54 HOH HOH . D 4 HOH A 52 253 55 HOH HOH . D 4 HOH A 53 254 56 HOH HOH . D 4 HOH A 54 255 57 HOH HOH . D 4 HOH A 55 256 58 HOH HOH . D 4 HOH A 56 257 60 HOH HOH . D 4 HOH A 57 258 61 HOH HOH . D 4 HOH A 58 259 62 HOH HOH . D 4 HOH A 59 260 63 HOH HOH . D 4 HOH A 60 261 66 HOH HOH . D 4 HOH A 61 262 67 HOH HOH . D 4 HOH A 62 263 68 HOH HOH . D 4 HOH A 63 264 70 HOH HOH . D 4 HOH A 64 265 71 HOH HOH . D 4 HOH A 65 266 72 HOH HOH . D 4 HOH A 66 267 75 HOH HOH . D 4 HOH A 67 268 78 HOH HOH . D 4 HOH A 68 269 80 HOH HOH . D 4 HOH A 69 270 81 HOH HOH . D 4 HOH A 70 271 82 HOH HOH . D 4 HOH A 71 272 83 HOH HOH . D 4 HOH A 72 273 85 HOH HOH . D 4 HOH A 73 274 87 HOH HOH . D 4 HOH A 74 275 89 HOH HOH . D 4 HOH A 75 276 90 HOH HOH . D 4 HOH A 76 277 91 HOH HOH . D 4 HOH A 77 278 92 HOH HOH . D 4 HOH A 78 279 93 HOH HOH . D 4 HOH A 79 280 100 HOH HOH . D 4 HOH A 80 281 104 HOH HOH . D 4 HOH A 81 282 107 HOH HOH . D 4 HOH A 82 283 111 HOH HOH . D 4 HOH A 83 284 112 HOH HOH . D 4 HOH A 84 285 113 HOH HOH . D 4 HOH A 85 286 116 HOH HOH . D 4 HOH A 86 287 117 HOH HOH . D 4 HOH A 87 288 122 HOH HOH . D 4 HOH A 88 289 129 HOH HOH . D 4 HOH A 89 290 134 HOH HOH . D 4 HOH A 90 291 135 HOH HOH . D 4 HOH A 91 292 136 HOH HOH . D 4 HOH A 92 293 139 HOH HOH . D 4 HOH A 93 294 141 HOH HOH . D 4 HOH A 94 295 145 HOH HOH . D 4 HOH A 95 296 147 HOH HOH . D 4 HOH A 96 297 148 HOH HOH . D 4 HOH A 97 298 149 HOH HOH . D 4 HOH A 98 299 150 HOH HOH . D 4 HOH A 99 300 151 HOH HOH . D 4 HOH A 100 301 153 HOH HOH . D 4 HOH A 101 302 158 HOH HOH . D 4 HOH A 102 303 162 HOH HOH . D 4 HOH A 103 304 163 HOH HOH . D 4 HOH A 104 305 164 HOH HOH . D 4 HOH A 105 306 165 HOH HOH . D 4 HOH A 106 307 7 HOH HOH . D 4 HOH A 107 308 12 HOH HOH . D 4 HOH A 108 309 16 HOH HOH . D 4 HOH A 109 310 22 HOH HOH . D 4 HOH A 110 311 24 HOH HOH . D 4 HOH A 111 312 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 SRT . . . C 3 20.047 49.234 0.692 1 36 ? O1 SRT 201 A 1 HETATM 2 O O11 SRT . . . C 3 21.067 48.071 -0.847 1 38.93 ? O11 SRT 201 A 1 HETATM 3 C C1 SRT . . . C 3 20.753 49.157 -0.324 1 38.28 ? C1 SRT 201 A 1 HETATM 4 C C2 SRT . . . C 3 21.239 50.466 -0.89 0.6 40.03 ? C2 SRT 201 A 1 HETATM 5 O O2 SRT . . . C 3 21.009 50.673 -2.293 1 41.51 ? O2 SRT 201 A 1 HETATM 6 C C3 SRT . . . C 3 22.704 50.566 -0.535 1 39.46 ? C3 SRT 201 A 1 HETATM 7 O O3 SRT . . . C 3 22.688 51.01 0.825 1 36.89 ? O3 SRT 201 A 1 HETATM 8 C C4 SRT . . . C 3 23.456 51.514 -1.449 0.6 39.48 ? C4 SRT 201 A 1 HETATM 9 O O4 SRT . . . C 3 22.968 52.624 -1.795 1 40.2 ? O4 SRT 201 A 1 HETATM 10 O O41 SRT . . . C 3 24.581 51.139 -1.841 0.6 39.08 ? O41 SRT 201 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #