data_2OV4 # _model_server_result.job_id XH4An0wiXHQn2HaymXxttw _model_server_result.datetime_utc '2024-10-18 23:29:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ov4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":930}' # _entry.id 2OV4 # _exptl.entry_id 2OV4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2OV4 _cell.length_a 62.178 _cell.length_b 62.178 _cell.length_c 220.882 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OV4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 62.178 62.178 110.441 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SD MET 1 A MET 1 1_555 B CS CS . A CS 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.888 ? metalc ? metalc2 A O GLN 30 A GLN 30 1_555 B CS CS . A CS 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.997 ? metalc ? metalc3 A O TYR 33 A TYR 33 1_555 B CS CS . A CS 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? metalc ? metalc4 A O GLN 74 A GLN 74 1_555 B CS CS . A CS 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.508 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 197 n n C1 C2 GOL sing 198 n n C1 H11 GOL sing 199 n n C1 H12 GOL sing 200 n n O1 HO1 GOL sing 201 n n C2 O2 GOL sing 202 n n C2 C3 GOL sing 203 n n C2 H2 GOL sing 204 n n O2 HO2 GOL sing 205 n n C3 O3 GOL sing 206 n n C3 H31 GOL sing 207 n n C3 H32 GOL sing 208 n n O3 HO3 GOL sing 209 n n # _atom_sites.entry_id 2OV4 _atom_sites.fract_transf_matrix[1][1] 0.016083 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016083 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004527 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CS A 1 900 900 CS CS . C 3 AQP A 1 400 400 AQP AQP . D 4 ANL A 1 950 950 ANL HAI . E 5 GOL A 1 930 930 GOL GOL . F 5 GOL A 1 940 940 GOL GOL . G 6 HOH A 1 502 502 HOH HOH . G 6 HOH A 2 503 503 HOH HOH . G 6 HOH A 3 504 504 HOH HOH . G 6 HOH A 4 505 505 HOH HOH . G 6 HOH A 5 506 506 HOH HOH . G 6 HOH A 6 507 507 HOH HOH . G 6 HOH A 7 508 508 HOH HOH . G 6 HOH A 8 509 509 HOH HOH . G 6 HOH A 9 510 510 HOH HOH . G 6 HOH A 10 511 511 HOH HOH . G 6 HOH A 11 512 512 HOH HOH . G 6 HOH A 12 513 513 HOH HOH . G 6 HOH A 13 514 514 HOH HOH . G 6 HOH A 14 515 515 HOH HOH . G 6 HOH A 15 516 516 HOH HOH . G 6 HOH A 16 517 517 HOH HOH . G 6 HOH A 17 518 518 HOH HOH . G 6 HOH A 18 519 519 HOH HOH . G 6 HOH A 19 520 520 HOH HOH . G 6 HOH A 20 521 521 HOH HOH . G 6 HOH A 21 522 522 HOH HOH . G 6 HOH A 22 523 523 HOH HOH . G 6 HOH A 23 524 524 HOH HOH . G 6 HOH A 24 525 525 HOH HOH . G 6 HOH A 25 526 526 HOH HOH . G 6 HOH A 26 527 527 HOH HOH . G 6 HOH A 27 528 528 HOH HOH . G 6 HOH A 28 529 529 HOH HOH . G 6 HOH A 29 530 530 HOH HOH . G 6 HOH A 30 531 531 HOH HOH . G 6 HOH A 31 533 533 HOH HOH . G 6 HOH A 32 535 535 HOH HOH . G 6 HOH A 33 536 536 HOH HOH . G 6 HOH A 34 537 537 HOH HOH . G 6 HOH A 35 538 538 HOH HOH . G 6 HOH A 36 539 539 HOH HOH . G 6 HOH A 37 540 540 HOH HOH . G 6 HOH A 38 541 541 HOH HOH . G 6 HOH A 39 542 542 HOH HOH . G 6 HOH A 40 543 543 HOH HOH . G 6 HOH A 41 544 544 HOH HOH . G 6 HOH A 42 545 545 HOH HOH . G 6 HOH A 43 546 546 HOH HOH . G 6 HOH A 44 547 547 HOH HOH . G 6 HOH A 45 548 548 HOH HOH . G 6 HOH A 46 549 549 HOH HOH . G 6 HOH A 47 550 550 HOH HOH . G 6 HOH A 48 551 551 HOH HOH . G 6 HOH A 49 552 552 HOH HOH . G 6 HOH A 50 553 553 HOH HOH . G 6 HOH A 51 554 554 HOH HOH . G 6 HOH A 52 555 555 HOH HOH . G 6 HOH A 53 556 556 HOH HOH . G 6 HOH A 54 557 557 HOH HOH . G 6 HOH A 55 558 558 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 5 45.176 34.265 10.448 1 64.45 ? C1 GOL 930 A 1 HETATM 2 O O1 GOL . . . E 5 45.473 33.293 9.19 1 69.17 ? O1 GOL 930 A 1 HETATM 3 C C2 GOL . . . E 5 44.495 33.89 11.607 1 69.42 ? C2 GOL 930 A 1 HETATM 4 O O2 GOL . . . E 5 44.362 32.561 11.668 1 69.74 ? O2 GOL 930 A 1 HETATM 5 C C3 GOL . . . E 5 44.259 34.857 12.286 1 74.23 ? C3 GOL 930 A 1 HETATM 6 O O3 GOL . . . E 5 44.216 36.335 12.773 1 79.03 ? O3 GOL 930 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 419 _model_server_stats.encode_time_ms 31 _model_server_stats.element_count 6 #