data_2OVU # _model_server_result.job_id 0xyP1DQiZvsSj6IJnFNArA _model_server_result.datetime_utc '2024-12-27 09:05:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ovu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":239}' # _entry.id 2OVU # _exptl.entry_id 2OVU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2OVU _cell.length_a 63.887 _cell.length_b 86.198 _cell.length_c 88.735 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OVU _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA,PQS tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 86.198 0 3 'crystal symmetry operation' 3_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 0 0 88.735 4 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 86.198 88.735 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 MAN _pdbx_entity_branch_link.comp_id_2 MMA _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B MMA 1 B 1 MMA A 242 MMA 2 n B MAN 2 B 2 MAN A 241 MAN # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id O2 _struct_conn.ptnr1_label_comp_id MMA _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id MMA _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id MAN _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id MAN _struct_conn.ptnr2_auth_seq_id 2 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.414 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2OVU _atom_sites.fract_transf_matrix[1][1] 0.015653 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011601 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01127 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 238 238 CA CA . D 4 MN A 1 239 239 MN MN . E 5 HOH A 1 243 1 HOH HOH . E 5 HOH A 2 244 2 HOH HOH . E 5 HOH A 3 245 3 HOH HOH . E 5 HOH A 4 246 4 HOH HOH . E 5 HOH A 5 247 5 HOH HOH . E 5 HOH A 6 248 6 HOH HOH . E 5 HOH A 7 249 7 HOH HOH . E 5 HOH A 8 250 8 HOH HOH . E 5 HOH A 9 251 9 HOH HOH . E 5 HOH A 10 252 10 HOH HOH . E 5 HOH A 11 253 11 HOH HOH . E 5 HOH A 12 254 12 HOH HOH . E 5 HOH A 13 255 13 HOH HOH . E 5 HOH A 14 256 14 HOH HOH . E 5 HOH A 15 257 15 HOH HOH . E 5 HOH A 16 258 16 HOH HOH . E 5 HOH A 17 259 17 HOH HOH . E 5 HOH A 18 260 18 HOH HOH . E 5 HOH A 19 261 19 HOH HOH . E 5 HOH A 20 262 20 HOH HOH . E 5 HOH A 21 263 21 HOH HOH . E 5 HOH A 22 264 22 HOH HOH . E 5 HOH A 23 265 23 HOH HOH . E 5 HOH A 24 266 24 HOH HOH . E 5 HOH A 25 267 25 HOH HOH . E 5 HOH A 26 268 26 HOH HOH . E 5 HOH A 27 269 27 HOH HOH . E 5 HOH A 28 270 28 HOH HOH . E 5 HOH A 29 271 29 HOH HOH . E 5 HOH A 30 272 30 HOH HOH . E 5 HOH A 31 273 31 HOH HOH . E 5 HOH A 32 274 32 HOH HOH . E 5 HOH A 33 275 33 HOH HOH . E 5 HOH A 34 276 34 HOH HOH . E 5 HOH A 35 277 35 HOH HOH . E 5 HOH A 36 278 36 HOH HOH . E 5 HOH A 37 279 37 HOH HOH . E 5 HOH A 38 280 38 HOH HOH . E 5 HOH A 39 281 39 HOH HOH . E 5 HOH A 40 282 40 HOH HOH . E 5 HOH A 41 283 41 HOH HOH . E 5 HOH A 42 284 42 HOH HOH . E 5 HOH A 43 285 43 HOH HOH . E 5 HOH A 44 286 44 HOH HOH . E 5 HOH A 45 287 45 HOH HOH . E 5 HOH A 46 288 46 HOH HOH . E 5 HOH A 47 289 47 HOH HOH . E 5 HOH A 48 290 48 HOH HOH . E 5 HOH A 49 291 49 HOH HOH . E 5 HOH A 50 292 50 HOH HOH . E 5 HOH A 51 293 51 HOH HOH . E 5 HOH A 52 294 52 HOH HOH . E 5 HOH A 53 295 53 HOH HOH . E 5 HOH A 54 296 54 HOH HOH . E 5 HOH A 55 297 55 HOH HOH . E 5 HOH A 56 298 57 HOH HOH . E 5 HOH A 57 299 58 HOH HOH . E 5 HOH A 58 300 59 HOH HOH . E 5 HOH A 59 301 60 HOH HOH . E 5 HOH A 60 302 61 HOH HOH . E 5 HOH A 61 303 62 HOH HOH . E 5 HOH A 62 304 63 HOH HOH . E 5 HOH A 63 305 65 HOH HOH . E 5 HOH A 64 306 66 HOH HOH . E 5 HOH A 65 307 67 HOH HOH . E 5 HOH A 66 308 69 HOH HOH . E 5 HOH A 67 309 70 HOH HOH . E 5 HOH A 68 310 72 HOH HOH . E 5 HOH A 69 311 74 HOH HOH . E 5 HOH A 70 312 75 HOH HOH . E 5 HOH A 71 313 76 HOH HOH . E 5 HOH A 72 314 77 HOH HOH . E 5 HOH A 73 315 78 HOH HOH . E 5 HOH A 74 316 79 HOH HOH . E 5 HOH A 75 317 80 HOH HOH . E 5 HOH A 76 318 81 HOH HOH . E 5 HOH A 77 319 82 HOH HOH . E 5 HOH A 78 320 83 HOH HOH . E 5 HOH A 79 321 84 HOH HOH . E 5 HOH A 80 322 85 HOH HOH . E 5 HOH A 81 323 86 HOH HOH . E 5 HOH A 82 324 87 HOH HOH . E 5 HOH A 83 325 88 HOH HOH . E 5 HOH A 84 326 91 HOH HOH . E 5 HOH A 85 327 92 HOH HOH . E 5 HOH A 86 328 93 HOH HOH . E 5 HOH A 87 329 94 HOH HOH . E 5 HOH A 88 330 97 HOH HOH . E 5 HOH A 89 331 98 HOH HOH . E 5 HOH A 90 332 99 HOH HOH . E 5 HOH A 91 333 100 HOH HOH . E 5 HOH A 92 334 101 HOH HOH . E 5 HOH A 93 335 102 HOH HOH . E 5 HOH A 94 336 103 HOH HOH . E 5 HOH A 95 337 105 HOH HOH . E 5 HOH A 96 338 106 HOH HOH . E 5 HOH A 97 339 107 HOH HOH . E 5 HOH A 98 340 108 HOH HOH . E 5 HOH A 99 341 109 HOH HOH . E 5 HOH A 100 342 110 HOH HOH . E 5 HOH A 101 343 111 HOH HOH . E 5 HOH A 102 344 112 HOH HOH . E 5 HOH A 103 345 113 HOH HOH . E 5 HOH A 104 346 114 HOH HOH . E 5 HOH A 105 347 115 HOH HOH . E 5 HOH A 106 348 116 HOH HOH . E 5 HOH A 107 349 117 HOH HOH . E 5 HOH A 108 350 118 HOH HOH . E 5 HOH A 109 351 119 HOH HOH . E 5 HOH A 110 352 120 HOH HOH . E 5 HOH A 111 353 121 HOH HOH . E 5 HOH A 112 354 123 HOH HOH . E 5 HOH A 113 355 124 HOH HOH . E 5 HOH A 114 356 125 HOH HOH . E 5 HOH A 115 357 126 HOH HOH . E 5 HOH A 116 358 127 HOH HOH . E 5 HOH A 117 359 128 HOH HOH . E 5 HOH A 118 360 129 HOH HOH . E 5 HOH A 119 361 130 HOH HOH . E 5 HOH A 120 362 131 HOH HOH . E 5 HOH A 121 363 132 HOH HOH . E 5 HOH A 122 364 133 HOH HOH . E 5 HOH A 123 365 134 HOH HOH . E 5 HOH A 124 366 135 HOH HOH . E 5 HOH A 125 367 136 HOH HOH . E 5 HOH A 126 368 137 HOH HOH . E 5 HOH A 127 369 138 HOH HOH . E 5 HOH A 128 370 140 HOH HOH . E 5 HOH A 129 371 141 HOH HOH . E 5 HOH A 130 372 142 HOH HOH . E 5 HOH A 131 373 143 HOH HOH . E 5 HOH A 132 374 144 HOH HOH . E 5 HOH A 133 375 145 HOH HOH . E 5 HOH A 134 376 146 HOH HOH . E 5 HOH A 135 377 147 HOH HOH . E 5 HOH A 136 378 148 HOH HOH . E 5 HOH A 137 379 150 HOH HOH . E 5 HOH A 138 380 151 HOH HOH . E 5 HOH A 139 381 152 HOH HOH . E 5 HOH A 140 382 153 HOH HOH . E 5 HOH A 141 383 154 HOH HOH . E 5 HOH A 142 384 155 HOH HOH . E 5 HOH A 143 385 156 HOH HOH . E 5 HOH A 144 386 157 HOH HOH . E 5 HOH A 145 387 158 HOH HOH . E 5 HOH A 146 388 159 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 15.057 _atom_site.Cartn_y 17.808 _atom_site.Cartn_z 28.87 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 8.98 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 239 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #