data_2OWX # _model_server_result.job_id 31h_fXwoJHFNFltP-h4RoA _model_server_result.datetime_utc '2024-10-13 07:21:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2owx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 2OWX # _exptl.entry_id 2OWX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 102.046 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MALONATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2OWX _cell.length_a 93.801 _cell.length_b 93.801 _cell.length_c 154.769 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OWX _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 372 A ASP 369 1_555 A N SUI 373 A SUI 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? covale ? covale2 A C SUI 373 A SUI 370 1_555 A N MET 374 A MET 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? # _chem_comp.formula 'C3 H2 O4 -2' _chem_comp.formula_weight 102.046 _chem_comp.id MLI _chem_comp.mon_nstd_flag . _chem_comp.name 'MALONATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MLI sing 250 n n C1 C3 MLI sing 251 n n C1 H11 MLI sing 252 n n C1 H12 MLI sing 253 n n C2 O6 MLI doub 254 n n C2 O7 MLI sing 255 n n C3 O8 MLI doub 256 n n C3 O9 MLI sing 257 n n # _atom_sites.entry_id 2OWX _atom_sites.fract_transf_matrix[1][1] 0.010661 _atom_sites.fract_transf_matrix[1][2] 0.006155 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01231 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006461 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MLI A 1 501 501 MLI MLI . C 3 GOL A 1 502 1 GOL GOL . D 4 HOH A 1 503 15 HOH HOH . D 4 HOH A 2 504 40 HOH HOH . D 4 HOH A 3 505 8 HOH HOH . D 4 HOH A 4 506 23 HOH HOH . D 4 HOH A 5 507 18 HOH HOH . D 4 HOH A 6 508 7 HOH HOH . D 4 HOH A 7 509 39 HOH HOH . D 4 HOH A 8 510 163 HOH HOH . D 4 HOH A 9 511 26 HOH HOH . D 4 HOH A 10 512 20 HOH HOH . D 4 HOH A 11 513 12 HOH HOH . D 4 HOH A 12 514 70 HOH HOH . D 4 HOH A 13 515 56 HOH HOH . D 4 HOH A 14 516 6 HOH HOH . D 4 HOH A 15 517 35 HOH HOH . D 4 HOH A 16 518 21 HOH HOH . D 4 HOH A 17 519 4 HOH HOH . D 4 HOH A 18 520 31 HOH HOH . D 4 HOH A 19 521 2 HOH HOH . D 4 HOH A 20 522 14 HOH HOH . D 4 HOH A 21 523 42 HOH HOH . D 4 HOH A 22 524 53 HOH HOH . D 4 HOH A 23 525 17 HOH HOH . D 4 HOH A 24 526 5 HOH HOH . D 4 HOH A 25 527 65 HOH HOH . D 4 HOH A 26 528 138 HOH HOH . D 4 HOH A 27 529 3 HOH HOH . D 4 HOH A 28 530 28 HOH HOH . D 4 HOH A 29 531 172 HOH HOH . D 4 HOH A 30 532 32 HOH HOH . D 4 HOH A 31 533 55 HOH HOH . D 4 HOH A 32 534 192 HOH HOH . D 4 HOH A 33 535 25 HOH HOH . D 4 HOH A 34 536 30 HOH HOH . D 4 HOH A 35 537 74 HOH HOH . D 4 HOH A 36 538 117 HOH HOH . D 4 HOH A 37 539 64 HOH HOH . D 4 HOH A 38 540 121 HOH HOH . D 4 HOH A 39 541 238 HOH HOH . D 4 HOH A 40 542 84 HOH HOH . D 4 HOH A 41 543 49 HOH HOH . D 4 HOH A 42 544 9 HOH HOH . D 4 HOH A 43 545 63 HOH HOH . D 4 HOH A 44 546 43 HOH HOH . D 4 HOH A 45 547 124 HOH HOH . D 4 HOH A 46 548 66 HOH HOH . D 4 HOH A 47 549 13 HOH HOH . D 4 HOH A 48 550 54 HOH HOH . D 4 HOH A 49 551 106 HOH HOH . D 4 HOH A 50 552 45 HOH HOH . D 4 HOH A 51 553 11 HOH HOH . D 4 HOH A 52 554 85 HOH HOH . D 4 HOH A 53 555 38 HOH HOH . D 4 HOH A 54 556 62 HOH HOH . D 4 HOH A 55 557 44 HOH HOH . D 4 HOH A 56 558 113 HOH HOH . D 4 HOH A 57 559 82 HOH HOH . D 4 HOH A 58 560 120 HOH HOH . D 4 HOH A 59 561 232 HOH HOH . D 4 HOH A 60 562 258 HOH HOH . D 4 HOH A 61 563 59 HOH HOH . D 4 HOH A 62 564 16 HOH HOH . D 4 HOH A 63 565 200 HOH HOH . D 4 HOH A 64 566 93 HOH HOH . D 4 HOH A 65 567 58 HOH HOH . D 4 HOH A 66 568 273 HOH HOH . D 4 HOH A 67 569 119 HOH HOH . D 4 HOH A 68 570 19 HOH HOH . D 4 HOH A 69 571 151 HOH HOH . D 4 HOH A 70 572 136 HOH HOH . D 4 HOH A 71 573 132 HOH HOH . D 4 HOH A 72 574 157 HOH HOH . D 4 HOH A 73 575 60 HOH HOH . D 4 HOH A 74 576 142 HOH HOH . D 4 HOH A 75 577 48 HOH HOH . D 4 HOH A 76 578 224 HOH HOH . D 4 HOH A 77 579 248 HOH HOH . D 4 HOH A 78 580 197 HOH HOH . D 4 HOH A 79 581 176 HOH HOH . D 4 HOH A 80 582 293 HOH HOH . D 4 HOH A 81 583 283 HOH HOH . D 4 HOH A 82 584 46 HOH HOH . D 4 HOH A 83 585 71 HOH HOH . D 4 HOH A 84 586 143 HOH HOH . D 4 HOH A 85 587 259 HOH HOH . D 4 HOH A 86 588 41 HOH HOH . D 4 HOH A 87 589 36 HOH HOH . D 4 HOH A 88 590 179 HOH HOH . D 4 HOH A 89 591 78 HOH HOH . D 4 HOH A 90 592 92 HOH HOH . D 4 HOH A 91 593 411 HOH HOH . D 4 HOH A 92 594 412 HOH HOH . D 4 HOH A 93 595 413 HOH HOH . D 4 HOH A 94 596 415 HOH HOH . D 4 HOH A 95 597 416 HOH HOH . D 4 HOH A 96 598 417 HOH HOH . D 4 HOH A 97 599 418 HOH HOH . D 4 HOH A 98 600 419 HOH HOH . D 4 HOH A 99 601 420 HOH HOH . D 4 HOH A 100 602 421 HOH HOH . D 4 HOH A 101 603 422 HOH HOH . D 4 HOH A 102 604 423 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MLI . . . B 2 70.828 39.907 63.397 1 70.5 ? C1 MLI 501 A 1 HETATM 2 C C2 MLI . . . B 2 71.409 40.893 64.383 1 70.26 ? C2 MLI 501 A 1 HETATM 3 C C3 MLI . . . B 2 70.935 40.42 61.978 1 70.23 ? C3 MLI 501 A 1 HETATM 4 O O6 MLI . . . B 2 72.649 41.027 64.449 1 68.65 ? O6 MLI 501 A 1 HETATM 5 O O7 MLI . . . B 2 70.616 41.54 65.1 1 71.6 ? O7 MLI 501 A 1 HETATM 6 O O8 MLI . . . B 2 72.064 40.714 61.522 1 70.15 ? O8 MLI 501 A 1 HETATM 7 O O9 MLI . . . B 2 69.885 40.532 61.312 1 67.9 ? O9 MLI 501 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #