data_2OX3
#
_model_server_result.job_id            PWqducsGNQHZ344DyjQdIQ 
_model_server_result.datetime_utc      '2024-10-20 18:58:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2ox3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":604}' 
#
_entry.id    2OX3 
#
_exptl.entry_id    2OX3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              168.042 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PHOSPHOENOLPYRUVATE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2OX3 
_cell.length_a            44.687 
_cell.length_b            83.112 
_cell.length_c            174.422 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2OX3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MSE 1 A MSE 1 1_555 A N LYS 2 A LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale2 A C LEU 108 A LEU 108 1_555 A N MSE 109 A MSE 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale3 A C MSE 109 A MSE 109 1_555 A N ASP 110 A ASP 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale4 A C THR 165 A THR 165 1_555 A N MSE 166 A MSE 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale5 A C MSE 166 A MSE 166 1_555 A N LEU 167 A LEU 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale6 A C ARG 193 A ARG 193 1_555 A N MSE 194 A MSE 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale7 A C MSE 194 A MSE 194 1_555 A N ARG 195 A ARG 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale8 A C PRO 278 A PRO 278 1_555 A N MSE 279 A MSE 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale9 A C MSE 279 A MSE 279 1_555 A N ALA 280 A ALA 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale10 A C HIS 317 A HIS 317 1_555 A N MSE 318 A MSE 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale11 A C MSE 318 A MSE 318 1_555 A N VAL 319 A VAL 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
#
_chem_comp.formula           'C3 H5 O6 P' 
_chem_comp.formula_weight    168.042 
_chem_comp.id                PEP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              PHOSPHOENOLPYRUVATE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEP doub 285 n n 
C1 O2' PEP sing 286 n n 
C1 C2 PEP sing 287 n n 
O2' HO2 PEP sing 288 n n 
C2 C3 PEP doub 289 n n 
C2 O2 PEP sing 290 n n 
C3 H31 PEP sing 291 n n 
C3 H32 PEP sing 292 n n 
O2 P PEP sing 293 n n 
P O1P PEP doub 294 n n 
P O2P PEP sing 295 n n 
P O3P PEP sing 296 n n 
O2P HOP2 PEP sing 297 n n 
O3P HOP3 PEP sing 298 n n 
#
_atom_sites.entry_id                     2OX3 
_atom_sites.fract_transf_matrix[1][1]    0.022378 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012032 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005733 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 F6P A 1 603 603 F6P F6P . 
C 3 PEP A 1 604 604 PEP PEP . 
D 4 HOH A 1 501 501 HOH HOH . 
D 4 HOH A 2 502 502 HOH HOH . 
D 4 HOH A 3 503 503 HOH HOH . 
D 4 HOH A 4 504 504 HOH HOH . 
D 4 HOH A 5 506 506 HOH HOH . 
D 4 HOH A 6 507 507 HOH HOH . 
D 4 HOH A 7 508 508 HOH HOH . 
D 4 HOH A 8 509 509 HOH HOH . 
D 4 HOH A 9 510 510 HOH HOH . 
D 4 HOH A 10 511 511 HOH HOH . 
D 4 HOH A 11 515 515 HOH HOH . 
D 4 HOH A 12 516 516 HOH HOH . 
D 4 HOH A 13 517 517 HOH HOH . 
D 4 HOH A 14 518 518 HOH HOH . 
D 4 HOH A 15 520 520 HOH HOH . 
D 4 HOH A 16 521 521 HOH HOH . 
D 4 HOH A 17 522 522 HOH HOH . 
D 4 HOH A 18 523 523 HOH HOH . 
D 4 HOH A 19 524 524 HOH HOH . 
D 4 HOH A 20 525 525 HOH HOH . 
D 4 HOH A 21 527 527 HOH HOH . 
D 4 HOH A 22 528 528 HOH HOH . 
D 4 HOH A 23 529 529 HOH HOH . 
D 4 HOH A 24 530 530 HOH HOH . 
D 4 HOH A 25 531 531 HOH HOH . 
D 4 HOH A 26 532 532 HOH HOH . 
D 4 HOH A 27 533 533 HOH HOH . 
D 4 HOH A 28 534 534 HOH HOH . 
D 4 HOH A 29 535 535 HOH HOH . 
D 4 HOH A 30 536 536 HOH HOH . 
D 4 HOH A 31 537 537 HOH HOH . 
D 4 HOH A 32 538 538 HOH HOH . 
D 4 HOH A 33 539 539 HOH HOH . 
D 4 HOH A 34 540 540 HOH HOH . 
D 4 HOH A 35 541 541 HOH HOH . 
D 4 HOH A 36 542 542 HOH HOH . 
D 4 HOH A 37 543 543 HOH HOH . 
D 4 HOH A 38 544 544 HOH HOH . 
D 4 HOH A 39 545 545 HOH HOH . 
D 4 HOH A 40 546 546 HOH HOH . 
D 4 HOH A 41 547 547 HOH HOH . 
D 4 HOH A 42 548 548 HOH HOH . 
D 4 HOH A 43 549 549 HOH HOH . 
D 4 HOH A 44 550 550 HOH HOH . 
D 4 HOH A 45 551 551 HOH HOH . 
D 4 HOH A 46 552 552 HOH HOH . 
D 4 HOH A 47 553 553 HOH HOH . 
D 4 HOH A 48 554 554 HOH HOH . 
D 4 HOH A 49 555 555 HOH HOH . 
D 4 HOH A 50 556 556 HOH HOH . 
D 4 HOH A 51 557 557 HOH HOH . 
D 4 HOH A 52 558 558 HOH HOH . 
D 4 HOH A 53 559 559 HOH HOH . 
D 4 HOH A 54 560 560 HOH HOH . 
D 4 HOH A 55 561 561 HOH HOH . 
D 4 HOH A 56 562 562 HOH HOH . 
D 4 HOH A 57 563 563 HOH HOH . 
D 4 HOH A 58 564 564 HOH HOH . 
D 4 HOH A 59 565 565 HOH HOH . 
D 4 HOH A 60 566 566 HOH HOH . 
D 4 HOH A 61 567 567 HOH HOH . 
D 4 HOH A 62 568 568 HOH HOH . 
D 4 HOH A 63 569 569 HOH HOH . 
D 4 HOH A 64 570 570 HOH HOH . 
D 4 HOH A 65 571 571 HOH HOH . 
D 4 HOH A 66 572 572 HOH HOH . 
D 4 HOH A 67 573 573 HOH HOH . 
D 4 HOH A 68 575 575 HOH HOH . 
D 4 HOH A 69 576 576 HOH HOH . 
D 4 HOH A 70 577 577 HOH HOH . 
D 4 HOH A 71 578 578 HOH HOH . 
D 4 HOH A 72 579 579 HOH HOH . 
D 4 HOH A 73 580 580 HOH HOH . 
D 4 HOH A 74 581 581 HOH HOH . 
D 4 HOH A 75 583 583 HOH HOH . 
D 4 HOH A 76 584 584 HOH HOH . 
D 4 HOH A 77 585 585 HOH HOH . 
D 4 HOH A 78 586 586 HOH HOH . 
D 4 HOH A 79 587 587 HOH HOH . 
D 4 HOH A 80 588 588 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEP . . . C 3 -2.304 14.501 -0.999 1 42.75 ? C1 PEP 604 A 1 
HETATM 2 O O1 PEP . . . C 3 -1.881 13.73 -0.114 1 42.64 ? O1 PEP 604 A 1 
HETATM 3 O O2' PEP . . . C 3 -2.009 14.291 -2.198 1 46.96 ? O2' PEP 604 A 1 
HETATM 4 C C2 PEP . . . C 3 -3.144 15.647 -0.612 1 41.88 ? C2 PEP 604 A 1 
HETATM 5 C C3 PEP . . . C 3 -3.607 16.491 -1.568 1 41.29 ? C3 PEP 604 A 1 
HETATM 6 O O2 PEP . . . C 3 -3.406 15.779 0.744 1 42.43 ? O2 PEP 604 A 1 
HETATM 7 P P PEP . . . C 3 -4.138 17.162 1.209 1 39.78 ? P PEP 604 A 1 
HETATM 8 O O1P PEP . . . C 3 -5.506 17.281 0.555 1 39.68 ? O1P PEP 604 A 1 
HETATM 9 O O2P PEP . . . C 3 -4.307 17.103 2.72 1 38.19 ? O2P PEP 604 A 1 
HETATM 10 O O3P PEP . . . C 3 -3.29 18.38 0.844 1 42.02 ? O3P PEP 604 A 1 
#
_model_server_stats.io_time_ms              71 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           539 
_model_server_stats.encode_time_ms          40 
_model_server_stats.element_count           10 
#