data_2OXD # _model_server_result.job_id T6vEJYhKKuqjR56JJzX1ug _model_server_result.datetime_utc '2024-11-24 21:37:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2oxd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":338}' # _entry.id 2OXD # _exptl.entry_id 2OXD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 449.72 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4,5,6,7-TETRABROMO-1H,3H-BENZIMIDAZOL-2-ONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.56 _cell.angle_gamma 90 _cell.entry_id 2OXD _cell.length_a 142.148 _cell.length_b 60.316 _cell.length_c 46.238 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OXD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H2 Br4 N2 O' _chem_comp.formula_weight 449.72 _chem_comp.id K32 _chem_comp.mon_nstd_flag . _chem_comp.name 4,5,6,7-TETRABROMO-1H,3H-BENZIMIDAZOL-2-ONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR1 C5 K32 sing 173 n n C5 C7 K32 sing 174 n y C5 C2 K32 doub 175 n y C2 C3 K32 sing 176 n y C2 BR2 K32 sing 177 n n C7 C8 K32 doub 178 n y C7 N14 K32 sing 179 n n N14 C13 K32 sing 180 n n N14 H14 K32 sing 181 n n C13 N6 K32 sing 182 n n C13 O10 K32 doub 183 n n N6 C8 K32 sing 184 n n N6 H6 K32 sing 185 n n C8 C4 K32 sing 186 n y C4 BR3 K32 sing 187 n n C4 C3 K32 doub 188 n y C3 BR4 K32 sing 189 n n # _atom_sites.entry_id 2OXD _atom_sites.fract_transf_matrix[1][1] 0.007035 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001697 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016579 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022247 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K32 A 1 338 301 K32 K32 . C 3 HOH A 1 339 1 HOH HOH . C 3 HOH A 2 340 2 HOH HOH . C 3 HOH A 3 341 3 HOH HOH . C 3 HOH A 4 342 4 HOH HOH . C 3 HOH A 5 343 7 HOH HOH . C 3 HOH A 6 344 8 HOH HOH . C 3 HOH A 7 345 12 HOH HOH . C 3 HOH A 8 346 13 HOH HOH . C 3 HOH A 9 347 18 HOH HOH . C 3 HOH A 10 348 25 HOH HOH . C 3 HOH A 11 349 27 HOH HOH . C 3 HOH A 12 350 32 HOH HOH . C 3 HOH A 13 351 35 HOH HOH . C 3 HOH A 14 352 40 HOH HOH . C 3 HOH A 15 353 43 HOH HOH . C 3 HOH A 16 354 45 HOH HOH . C 3 HOH A 17 355 48 HOH HOH . C 3 HOH A 18 356 51 HOH HOH . C 3 HOH A 19 357 53 HOH HOH . C 3 HOH A 20 358 55 HOH HOH . C 3 HOH A 21 359 58 HOH HOH . C 3 HOH A 22 360 62 HOH HOH . C 3 HOH A 23 361 65 HOH HOH . C 3 HOH A 24 362 68 HOH HOH . C 3 HOH A 25 363 70 HOH HOH . C 3 HOH A 26 364 78 HOH HOH . C 3 HOH A 27 365 79 HOH HOH . C 3 HOH A 28 366 87 HOH HOH . C 3 HOH A 29 367 100 HOH HOH . C 3 HOH A 30 368 119 HOH HOH . C 3 HOH A 31 369 121 HOH HOH . C 3 HOH A 32 370 180 HOH HOH . C 3 HOH A 33 371 183 HOH HOH . C 3 HOH A 34 372 184 HOH HOH . C 3 HOH A 35 373 202 HOH HOH . C 3 HOH A 36 374 203 HOH HOH . C 3 HOH A 37 375 204 HOH HOH . C 3 HOH A 38 376 206 HOH HOH . C 3 HOH A 39 377 207 HOH HOH . C 3 HOH A 40 378 208 HOH HOH . C 3 HOH A 41 379 209 HOH HOH . C 3 HOH A 42 380 210 HOH HOH . C 3 HOH A 43 381 211 HOH HOH . C 3 HOH A 44 382 212 HOH HOH . C 3 HOH A 45 383 213 HOH HOH . C 3 HOH A 46 384 214 HOH HOH . C 3 HOH A 47 385 215 HOH HOH . C 3 HOH A 48 386 216 HOH HOH . C 3 HOH A 49 387 217 HOH HOH . C 3 HOH A 50 388 219 HOH HOH . C 3 HOH A 51 389 221 HOH HOH . C 3 HOH A 52 390 222 HOH HOH . C 3 HOH A 53 391 223 HOH HOH . C 3 HOH A 54 392 224 HOH HOH . C 3 HOH A 55 393 225 HOH HOH . C 3 HOH A 56 394 226 HOH HOH . C 3 HOH A 57 395 227 HOH HOH . C 3 HOH A 58 396 228 HOH HOH . C 3 HOH A 59 397 229 HOH HOH . C 3 HOH A 60 398 230 HOH HOH . C 3 HOH A 61 399 231 HOH HOH . C 3 HOH A 62 400 232 HOH HOH . C 3 HOH A 63 401 233 HOH HOH . C 3 HOH A 64 402 234 HOH HOH . C 3 HOH A 65 403 235 HOH HOH . C 3 HOH A 66 404 237 HOH HOH . C 3 HOH A 67 405 238 HOH HOH . C 3 HOH A 68 406 239 HOH HOH . C 3 HOH A 69 407 240 HOH HOH . C 3 HOH A 70 408 241 HOH HOH . C 3 HOH A 71 409 242 HOH HOH . C 3 HOH A 72 410 243 HOH HOH . C 3 HOH A 73 411 244 HOH HOH . C 3 HOH A 74 412 245 HOH HOH . C 3 HOH A 75 413 246 HOH HOH . C 3 HOH A 76 414 247 HOH HOH . C 3 HOH A 77 415 248 HOH HOH . C 3 HOH A 78 416 249 HOH HOH . C 3 HOH A 79 417 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 BR BR1 K32 . . . B 2 20.811 6.879 22.679 1 56.33 ? BR1 K32 338 A 1 HETATM 2 C C5 K32 . . . B 2 21.288 7.411 20.922 1 52.55 ? C5 K32 338 A 1 HETATM 3 C C2 K32 . . . B 2 20.676 8.501 20.299 1 52.33 ? C2 K32 338 A 1 HETATM 4 BR BR2 K32 . . . B 2 19.342 9.456 21.226 1 51.47 ? BR2 K32 338 A 1 HETATM 5 C C7 K32 . . . B 2 22.262 6.675 20.273 1 52.29 ? C7 K32 338 A 1 HETATM 6 N N14 K32 . . . B 2 22.972 5.603 20.66 1 52.14 ? N14 K32 338 A 1 HETATM 7 C C13 K32 . . . B 2 23.753 5.352 19.602 1 52.84 ? C13 K32 338 A 1 HETATM 8 O O10 K32 . . . B 2 24.585 4.365 19.625 1 52.45 ? O10 K32 338 A 1 HETATM 9 N N6 K32 . . . B 2 23.608 6.189 18.552 1 52.44 ? N6 K32 338 A 1 HETATM 10 C C8 K32 . . . B 2 22.646 7.041 18.978 1 52.73 ? C8 K32 338 A 1 HETATM 11 C C4 K32 . . . B 2 22.019 8.131 18.379 1 52.33 ? C4 K32 338 A 1 HETATM 12 BR BR3 K32 . . . B 2 22.589 8.576 16.659 1 51.44 ? BR3 K32 338 A 1 HETATM 13 C C3 K32 . . . B 2 21.025 8.886 19.007 1 52.91 ? C3 K32 338 A 1 HETATM 14 BR BR4 K32 . . . B 2 20.164 10.383 18.141 1 52.65 ? BR4 K32 338 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #