data_2OXL
#
_model_server_result.job_id            sIwsNz9Mg6k-QW7SWAnjxA 
_model_server_result.datetime_utc      '2024-11-22 01:26:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2oxl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":101}' 
#
_entry.id    2OXL 
#
_exptl.entry_id    2OXL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              292.369 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'octyl beta-D-glucopyranoside' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2OXL 
_cell.length_a            69.919 
_cell.length_b            69.945 
_cell.length_c            55.021 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2OXL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C LEU 17 A LEU 41 1_555 A N MSE 18 A MSE 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale2 A C MSE 18 A MSE 42 1_555 A N LEU 19 A LEU 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale3 B C LEU 17 B LEU 41 1_555 B N MSE 18 B MSE 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale4 B C MSE 18 B MSE 42 1_555 B N LEU 19 B LEU 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
#
_chem_comp.formula           'C14 H28 O6' 
_chem_comp.formula_weight    292.369 
_chem_comp.id                BOG 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'octyl beta-D-glucopyranoside' 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 BOG sing 70 n n 
C1 C2 BOG sing 71 n n 
C1 O5 BOG sing 72 n n 
C1 H1 BOG sing 73 n n 
O1 C1' BOG sing 74 n n 
C2 O2 BOG sing 75 n n 
C2 C3 BOG sing 76 n n 
C2 H2 BOG sing 77 n n 
O2 HO2 BOG sing 78 n n 
C3 O3 BOG sing 79 n n 
C3 C4 BOG sing 80 n n 
C3 H3 BOG sing 81 n n 
O3 HO3 BOG sing 82 n n 
C4 O4 BOG sing 83 n n 
C4 C5 BOG sing 84 n n 
C4 H4 BOG sing 85 n n 
O4 HO4 BOG sing 86 n n 
C5 O5 BOG sing 87 n n 
C5 C6 BOG sing 88 n n 
C5 H5 BOG sing 89 n n 
C6 O6 BOG sing 90 n n 
C6 H61 BOG sing 91 n n 
C6 H62 BOG sing 92 n n 
O6 HO6 BOG sing 93 n n 
C1' C2' BOG sing 94 n n 
C1' "H1'1" BOG sing 95 n n 
C1' "H1'2" BOG sing 96 n n 
C2' C3' BOG sing 97 n n 
C2' "H2'1" BOG sing 98 n n 
C2' "H2'2" BOG sing 99 n n 
C3' C4' BOG sing 100 n n 
C3' "H3'1" BOG sing 101 n n 
C3' "H3'2" BOG sing 102 n n 
C4' C5' BOG sing 103 n n 
C4' "H4'1" BOG sing 104 n n 
C4' "H4'2" BOG sing 105 n n 
C5' C6' BOG sing 106 n n 
C5' "H5'1" BOG sing 107 n n 
C5' "H5'2" BOG sing 108 n n 
C6' C7' BOG sing 109 n n 
C6' "H6'1" BOG sing 110 n n 
C6' "H6'2" BOG sing 111 n n 
C7' C8' BOG sing 112 n n 
C7' "H7'1" BOG sing 113 n n 
C7' "H7'2" BOG sing 114 n n 
C8' "H8'1" BOG sing 115 n n 
C8' "H8'2" BOG sing 116 n n 
C8' "H8'3" BOG sing 117 n n 
#
_pdbx_chem_comp_identifier.comp_id            BOG 
_pdbx_chem_comp_identifier.identifier         b-octylglucoside 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     2OXL 
_atom_sites.fract_transf_matrix[1][1]    0.014302 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014297 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018175 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 BOG A 1 101 101 BOG BOG . 
D 2 BOG B 1 101 101 BOG BOG . 
E 3 HOH A 1 102 1 HOH HOH . 
E 3 HOH A 2 103 3 HOH HOH . 
E 3 HOH A 3 104 4 HOH HOH . 
E 3 HOH A 4 105 8 HOH HOH . 
E 3 HOH A 5 106 13 HOH HOH . 
E 3 HOH A 6 107 14 HOH HOH . 
E 3 HOH A 7 108 15 HOH HOH . 
E 3 HOH A 8 109 16 HOH HOH . 
E 3 HOH A 9 110 18 HOH HOH . 
E 3 HOH A 10 111 22 HOH HOH . 
E 3 HOH A 11 112 29 HOH HOH . 
F 3 HOH B 1 102 2 HOH HOH . 
F 3 HOH B 2 103 5 HOH HOH . 
F 3 HOH B 3 104 6 HOH HOH . 
F 3 HOH B 4 105 7 HOH HOH . 
F 3 HOH B 5 106 9 HOH HOH . 
F 3 HOH B 6 107 10 HOH HOH . 
F 3 HOH B 7 108 11 HOH HOH . 
F 3 HOH B 8 109 12 HOH HOH . 
F 3 HOH B 9 110 17 HOH HOH . 
F 3 HOH B 10 111 19 HOH HOH . 
F 3 HOH B 11 112 20 HOH HOH . 
F 3 HOH B 12 113 21 HOH HOH . 
F 3 HOH B 13 114 23 HOH HOH . 
F 3 HOH B 14 115 24 HOH HOH . 
F 3 HOH B 15 116 25 HOH HOH . 
F 3 HOH B 16 117 26 HOH HOH . 
F 3 HOH B 17 118 27 HOH HOH . 
F 3 HOH B 18 119 28 HOH HOH . 
F 3 HOH B 19 120 30 HOH HOH . 
F 3 HOH B 20 121 31 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BOG . . . D 2 27.627 -31.038 6.876 0.5 52.77 ? C1 BOG 101 B 1 
HETATM 2 O O1 BOG . . . D 2 27.143 -31.861 5.79 0.5 52.14 ? O1 BOG 101 B 1 
HETATM 3 C C2 BOG . . . D 2 27.923 -29.596 6.463 0.5 50.22 ? C2 BOG 101 B 1 
HETATM 4 O O2 BOG . . . D 2 28.472 -29.537 5.143 0.5 53.86 ? O2 BOG 101 B 1 
HETATM 5 C C3 BOG . . . D 2 28.917 -29.01 7.464 0.5 50.31 ? C3 BOG 101 B 1 
HETATM 6 O O3 BOG . . . D 2 28.95 -27.595 7.26 0.5 41.28 ? O3 BOG 101 B 1 
HETATM 7 C C4 BOG . . . D 2 28.618 -29.381 8.958 0.5 50.81 ? C4 BOG 101 B 1 
HETATM 8 O O4 BOG . . . D 2 28.357 -28.191 9.723 0.5 52.44 ? O4 BOG 101 B 1 
HETATM 9 C C5 BOG . . . D 2 27.503 -30.47 9.194 0.5 52.53 ? C5 BOG 101 B 1 
HETATM 10 O O5 BOG . . . D 2 26.736 -30.871 8.013 0.5 52.41 ? O5 BOG 101 B 1 
HETATM 11 C C6 BOG . . . D 2 26.444 -30.118 10.273 0.5 52.18 ? C6 BOG 101 B 1 
HETATM 12 O O6 BOG . . . D 2 25.909 -31.298 10.897 0.5 49.56 ? O6 BOG 101 B 1 
HETATM 13 C C1' BOG . . . D 2 25.714 -31.987 5.808 1 51.48 ? C1' BOG 101 B 1 
HETATM 14 C C2' BOG . . . D 2 25.251 -31.914 4.354 1 48.6 ? C2' BOG 101 B 1 
HETATM 15 C C3' BOG . . . D 2 23.735 -31.705 4.216 1 40.49 ? C3' BOG 101 B 1 
HETATM 16 C C4' BOG . . . D 2 22.924 -32.342 5.346 1 34.34 ? C4' BOG 101 B 1 
HETATM 17 C C5' BOG . . . D 2 21.634 -32.915 4.792 1 30.96 ? C5' BOG 101 B 1 
HETATM 18 C C6' BOG . . . D 2 20.682 -33.256 5.921 1 28.91 ? C6' BOG 101 B 1 
HETATM 19 C C7' BOG . . . D 2 19.292 -33.353 5.302 1 30.3 ? C7' BOG 101 B 1 
HETATM 20 C C8' BOG . . . D 2 18.264 -33.58 6.385 1 27.49 ? C8' BOG 101 B 1 
#
_model_server_stats.io_time_ms              56 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           20 
#