data_2OXX # _model_server_result.job_id BJIU6QKDc-AaNiie3X06oA _model_server_result.datetime_utc '2024-11-22 04:40:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2oxx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 2OXX # _exptl.entry_id 2OXX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 465.785 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4,5,6,7-TETRABROMO-1H,3H-BENZIMIDAZOL-2-THIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.82 _cell.angle_gamma 90 _cell.entry_id 2OXX _cell.length_a 141.348 _cell.length_b 60.524 _cell.length_c 45.492 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OXX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H2 Br4 N2 S' _chem_comp.formula_weight 465.785 _chem_comp.id K22 _chem_comp.mon_nstd_flag . _chem_comp.name 4,5,6,7-TETRABROMO-1H,3H-BENZIMIDAZOL-2-THIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR1 C5 K22 sing 173 n n C5 C2 K22 doub 174 n y C5 C7 K22 sing 175 n y C2 BR2 K22 sing 176 n n C2 C3 K22 sing 177 n y C7 N14 K22 sing 178 n n C7 C8 K22 doub 179 n y N14 C13 K22 sing 180 n n N14 H14 K22 sing 181 n n C13 S10 K22 doub 182 n n C13 N6 K22 sing 183 n n N6 C8 K22 sing 184 n n N6 H6 K22 sing 185 n n C8 C4 K22 sing 186 n y C4 C3 K22 doub 187 n y C4 BR4 K22 sing 188 n n C3 BR3 K22 sing 189 n n # _atom_sites.entry_id 2OXX _atom_sites.fract_transf_matrix[1][1] 0.007075 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00161 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016522 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022544 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K22 A 1 501 501 K22 K22 . C 3 HOH A 1 502 1 HOH HOH . C 3 HOH A 2 503 2 HOH HOH . C 3 HOH A 3 504 3 HOH HOH . C 3 HOH A 4 505 4 HOH HOH . C 3 HOH A 5 506 5 HOH HOH . C 3 HOH A 6 507 6 HOH HOH . C 3 HOH A 7 508 7 HOH HOH . C 3 HOH A 8 509 8 HOH HOH . C 3 HOH A 9 510 9 HOH HOH . C 3 HOH A 10 511 10 HOH HOH . C 3 HOH A 11 512 11 HOH HOH . C 3 HOH A 12 513 12 HOH HOH . C 3 HOH A 13 514 13 HOH HOH . C 3 HOH A 14 515 14 HOH HOH . C 3 HOH A 15 516 15 HOH HOH . C 3 HOH A 16 517 16 HOH HOH . C 3 HOH A 17 518 17 HOH HOH . C 3 HOH A 18 519 18 HOH HOH . C 3 HOH A 19 520 19 HOH HOH . C 3 HOH A 20 521 20 HOH HOH . C 3 HOH A 21 522 21 HOH HOH . C 3 HOH A 22 523 22 HOH HOH . C 3 HOH A 23 524 23 HOH HOH . C 3 HOH A 24 525 24 HOH HOH . C 3 HOH A 25 526 25 HOH HOH . C 3 HOH A 26 527 26 HOH HOH . C 3 HOH A 27 528 27 HOH HOH . C 3 HOH A 28 529 28 HOH HOH . C 3 HOH A 29 530 29 HOH HOH . C 3 HOH A 30 531 30 HOH HOH . C 3 HOH A 31 532 31 HOH HOH . C 3 HOH A 32 533 34 HOH HOH . C 3 HOH A 33 534 35 HOH HOH . C 3 HOH A 34 535 36 HOH HOH . C 3 HOH A 35 536 37 HOH HOH . C 3 HOH A 36 537 39 HOH HOH . C 3 HOH A 37 538 40 HOH HOH . C 3 HOH A 38 539 41 HOH HOH . C 3 HOH A 39 540 43 HOH HOH . C 3 HOH A 40 541 44 HOH HOH . C 3 HOH A 41 542 45 HOH HOH . C 3 HOH A 42 543 46 HOH HOH . C 3 HOH A 43 544 47 HOH HOH . C 3 HOH A 44 545 48 HOH HOH . C 3 HOH A 45 546 49 HOH HOH . C 3 HOH A 46 547 50 HOH HOH . C 3 HOH A 47 548 51 HOH HOH . C 3 HOH A 48 549 52 HOH HOH . C 3 HOH A 49 550 53 HOH HOH . C 3 HOH A 50 551 54 HOH HOH . C 3 HOH A 51 552 55 HOH HOH . C 3 HOH A 52 553 56 HOH HOH . C 3 HOH A 53 554 57 HOH HOH . C 3 HOH A 54 555 58 HOH HOH . C 3 HOH A 55 556 59 HOH HOH . C 3 HOH A 56 557 60 HOH HOH . C 3 HOH A 57 558 61 HOH HOH . C 3 HOH A 58 559 62 HOH HOH . C 3 HOH A 59 560 63 HOH HOH . C 3 HOH A 60 561 64 HOH HOH . C 3 HOH A 61 562 65 HOH HOH . C 3 HOH A 62 563 66 HOH HOH . C 3 HOH A 63 564 67 HOH HOH . C 3 HOH A 64 565 69 HOH HOH . C 3 HOH A 65 566 70 HOH HOH . C 3 HOH A 66 567 71 HOH HOH . C 3 HOH A 67 568 73 HOH HOH . C 3 HOH A 68 569 74 HOH HOH . C 3 HOH A 69 570 76 HOH HOH . C 3 HOH A 70 571 77 HOH HOH . C 3 HOH A 71 572 78 HOH HOH . C 3 HOH A 72 573 79 HOH HOH . C 3 HOH A 73 574 81 HOH HOH . C 3 HOH A 74 575 83 HOH HOH . C 3 HOH A 75 576 84 HOH HOH . C 3 HOH A 76 577 85 HOH HOH . C 3 HOH A 77 578 86 HOH HOH . C 3 HOH A 78 579 87 HOH HOH . C 3 HOH A 79 580 88 HOH HOH . C 3 HOH A 80 581 89 HOH HOH . C 3 HOH A 81 582 90 HOH HOH . C 3 HOH A 82 583 91 HOH HOH . C 3 HOH A 83 584 92 HOH HOH . C 3 HOH A 84 585 93 HOH HOH . C 3 HOH A 85 586 94 HOH HOH . C 3 HOH A 86 587 95 HOH HOH . C 3 HOH A 87 588 96 HOH HOH . C 3 HOH A 88 589 97 HOH HOH . C 3 HOH A 89 590 98 HOH HOH . C 3 HOH A 90 591 99 HOH HOH . C 3 HOH A 91 592 100 HOH HOH . C 3 HOH A 92 593 101 HOH HOH . C 3 HOH A 93 594 102 HOH HOH . C 3 HOH A 94 595 103 HOH HOH . C 3 HOH A 95 596 104 HOH HOH . C 3 HOH A 96 597 105 HOH HOH . C 3 HOH A 97 598 106 HOH HOH . C 3 HOH A 98 599 107 HOH HOH . C 3 HOH A 99 600 108 HOH HOH . C 3 HOH A 100 601 109 HOH HOH . C 3 HOH A 101 602 110 HOH HOH . C 3 HOH A 102 603 111 HOH HOH . C 3 HOH A 103 604 112 HOH HOH . C 3 HOH A 104 605 113 HOH HOH . C 3 HOH A 105 606 114 HOH HOH . C 3 HOH A 106 607 115 HOH HOH . C 3 HOH A 107 608 116 HOH HOH . C 3 HOH A 108 609 117 HOH HOH . C 3 HOH A 109 610 118 HOH HOH . C 3 HOH A 110 611 119 HOH HOH . C 3 HOH A 111 612 120 HOH HOH . C 3 HOH A 112 613 121 HOH HOH . C 3 HOH A 113 614 122 HOH HOH . C 3 HOH A 114 615 123 HOH HOH . C 3 HOH A 115 616 124 HOH HOH . C 3 HOH A 116 617 125 HOH HOH . C 3 HOH A 117 618 126 HOH HOH . C 3 HOH A 118 619 127 HOH HOH . C 3 HOH A 119 620 128 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 BR BR1 K22 . . . B 2 22.581 8.442 16.782 1 45.68 ? BR1 K22 501 A 1 HETATM 2 C C5 K22 . . . B 2 22.191 7.858 18.532 1 44.47 ? C5 K22 501 A 1 HETATM 3 C C2 K22 . . . B 2 21.213 8.612 19.149 1 44.42 ? C2 K22 501 A 1 HETATM 4 BR BR2 K22 . . . B 2 20.327 10.052 18.253 1 42.22 ? BR2 K22 501 A 1 HETATM 5 C C7 K22 . . . B 2 22.805 6.786 19.223 1 44.38 ? C7 K22 501 A 1 HETATM 6 N N14 K22 . . . B 2 23.759 5.877 18.943 1 44.18 ? N14 K22 501 A 1 HETATM 7 C C13 K22 . . . B 2 23.931 5.075 20.033 1 44.73 ? C13 K22 501 A 1 HETATM 8 S S10 K22 . . . B 2 24.965 3.798 20.219 1 45.38 ? S10 K22 501 A 1 HETATM 9 N N6 K22 . . . B 2 23.103 5.464 21.007 1 43.43 ? N6 K22 501 A 1 HETATM 10 C C8 K22 . . . B 2 22.413 6.498 20.54 1 44.02 ? C8 K22 501 A 1 HETATM 11 C C4 K22 . . . B 2 21.445 7.253 21.154 1 44.65 ? C4 K22 501 A 1 HETATM 12 BR BR4 K22 . . . B 2 20.89 6.886 22.937 1 49.1 ? BR4 K22 501 A 1 HETATM 13 C C3 K22 . . . B 2 20.874 8.278 20.441 1 44.46 ? C3 K22 501 A 1 HETATM 14 BR BR3 K22 . . . B 2 19.575 9.27 21.298 1 42.88 ? BR3 K22 501 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #