data_2OXZ # _model_server_result.job_id j30a8mWxf3jNSvW6MkhENw _model_server_result.datetime_utc '2024-11-15 01:34:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2oxz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":267}' # _entry.id 2OXZ # _exptl.entry_id 2OXZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.41 _cell.angle_gamma 90 _cell.entry_id 2OXZ _cell.length_a 51.546 _cell.length_b 60.378 _cell.length_c 54.449 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OXZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 20 A ASP 124 1_555 G CA CA . A CA 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc2 A OD2 ASP 20 A ASP 124 1_555 G CA CA . A CA 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc3 A O ASP 54 A ASP 158 1_555 F CA CA . A CA 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc4 A NE2 HIS 64 A HIS 168 1_555 E ZN ZN . A ZN 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc5 A OD1 ASP 66 A ASP 170 1_555 E ZN ZN . A ZN 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc6 A OD2 ASP 71 A ASP 175 1_555 H CA CA . A CA 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc7 A O GLY 72 A GLY 176 1_555 H CA CA . A CA 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc8 A O GLY 74 A GLY 178 1_555 H CA CA . A CA 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc9 A O ILE 76 A ILE 180 1_555 H CA CA . A CA 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc10 A NE2 HIS 79 A HIS 183 1_555 E ZN ZN . A ZN 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc11 A O GLY 86 A GLY 190 1_555 F CA CA . A CA 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc12 A O GLY 88 A GLY 192 1_555 F CA CA . A CA 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc13 A OD2 ASP 90 A ASP 194 1_555 F CA CA . A CA 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc14 A ND1 HIS 92 A HIS 196 1_555 E ZN ZN . A ZN 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc15 A OD1 ASP 94 A ASP 198 1_555 H CA CA . A CA 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc16 A O GLU 95 A GLU 199 1_555 G CA CA . A CA 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc17 A OE2 GLU 95 A GLU 199 1_555 G CA CA . A CA 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc18 A O GLU 97 A GLU 201 1_555 G CA CA . A CA 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc19 A OE2 GLU 97 A GLU 201 1_555 H CA CA . A CA 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc20 A NE2 HIS 114 A HIS 218 1_555 D ZN ZN . A ZN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc21 A NE2 HIS 118 A HIS 222 1_555 D ZN ZN . A ZN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc22 A NE2 HIS 124 A HIS 228 1_555 D ZN ZN . A ZN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc23 D ZN ZN . A ZN 264 1_555 B OXT GLY 3 Y GLY 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc24 F CA CA . A CA 266 1_555 I O HOH . A HOH 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc25 F CA CA . A CA 266 1_555 I O HOH . A HOH 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.886 ? metalc ? metalc26 G CA CA . A CA 267 1_555 I O HOH . A HOH 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? metalc ? metalc27 G CA CA . A CA 267 1_555 I O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2OXZ _atom_sites.fract_transf_matrix[1][1] 0.0194 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009218 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016562 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020333 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN A 1 264 264 ZN ZN . E 4 ZN A 1 265 265 ZN ZN . F 5 CA A 1 266 266 CA CA . G 5 CA A 1 267 267 CA CA . H 5 CA A 1 268 268 CA CA . I 6 HOH A 1 269 1 HOH HOH . I 6 HOH A 2 270 2 HOH HOH . I 6 HOH A 3 271 3 HOH HOH . I 6 HOH A 4 272 4 HOH HOH . I 6 HOH A 5 273 5 HOH HOH . I 6 HOH A 6 274 6 HOH HOH . I 6 HOH A 7 275 7 HOH HOH . I 6 HOH A 8 276 8 HOH HOH . I 6 HOH A 9 277 9 HOH HOH . I 6 HOH A 10 278 11 HOH HOH . I 6 HOH A 11 279 12 HOH HOH . I 6 HOH A 12 280 13 HOH HOH . I 6 HOH A 13 281 14 HOH HOH . I 6 HOH A 14 282 15 HOH HOH . I 6 HOH A 15 283 16 HOH HOH . I 6 HOH A 16 284 17 HOH HOH . I 6 HOH A 17 285 19 HOH HOH . I 6 HOH A 18 286 20 HOH HOH . I 6 HOH A 19 287 21 HOH HOH . I 6 HOH A 20 288 22 HOH HOH . I 6 HOH A 21 289 24 HOH HOH . I 6 HOH A 22 290 25 HOH HOH . I 6 HOH A 23 291 26 HOH HOH . I 6 HOH A 24 292 28 HOH HOH . I 6 HOH A 25 293 29 HOH HOH . I 6 HOH A 26 294 30 HOH HOH . I 6 HOH A 27 295 31 HOH HOH . I 6 HOH A 28 296 32 HOH HOH . I 6 HOH A 29 297 33 HOH HOH . I 6 HOH A 30 298 34 HOH HOH . I 6 HOH A 31 299 36 HOH HOH . I 6 HOH A 32 300 38 HOH HOH . I 6 HOH A 33 301 39 HOH HOH . I 6 HOH A 34 302 40 HOH HOH . I 6 HOH A 35 303 41 HOH HOH . I 6 HOH A 36 304 42 HOH HOH . I 6 HOH A 37 305 43 HOH HOH . I 6 HOH A 38 306 44 HOH HOH . I 6 HOH A 39 307 45 HOH HOH . I 6 HOH A 40 308 46 HOH HOH . I 6 HOH A 41 309 48 HOH HOH . I 6 HOH A 42 310 49 HOH HOH . I 6 HOH A 43 311 50 HOH HOH . I 6 HOH A 44 312 51 HOH HOH . I 6 HOH A 45 313 52 HOH HOH . I 6 HOH A 46 314 54 HOH HOH . I 6 HOH A 47 315 55 HOH HOH . I 6 HOH A 48 316 56 HOH HOH . I 6 HOH A 49 317 57 HOH HOH . I 6 HOH A 50 318 60 HOH HOH . I 6 HOH A 51 319 61 HOH HOH . I 6 HOH A 52 320 62 HOH HOH . I 6 HOH A 53 321 63 HOH HOH . I 6 HOH A 54 322 65 HOH HOH . I 6 HOH A 55 323 66 HOH HOH . I 6 HOH A 56 324 67 HOH HOH . I 6 HOH A 57 325 68 HOH HOH . I 6 HOH A 58 326 69 HOH HOH . I 6 HOH A 59 327 70 HOH HOH . I 6 HOH A 60 328 71 HOH HOH . I 6 HOH A 61 329 72 HOH HOH . I 6 HOH A 62 330 73 HOH HOH . I 6 HOH A 63 331 74 HOH HOH . I 6 HOH A 64 332 75 HOH HOH . I 6 HOH A 65 333 76 HOH HOH . I 6 HOH A 66 334 77 HOH HOH . I 6 HOH A 67 335 78 HOH HOH . I 6 HOH A 68 336 79 HOH HOH . I 6 HOH A 69 337 80 HOH HOH . I 6 HOH A 70 338 81 HOH HOH . I 6 HOH A 71 339 82 HOH HOH . I 6 HOH A 72 340 83 HOH HOH . I 6 HOH A 73 341 84 HOH HOH . I 6 HOH A 74 342 85 HOH HOH . I 6 HOH A 75 343 86 HOH HOH . I 6 HOH A 76 344 87 HOH HOH . I 6 HOH A 77 345 88 HOH HOH . I 6 HOH A 78 346 89 HOH HOH . I 6 HOH A 79 347 90 HOH HOH . I 6 HOH A 80 348 91 HOH HOH . I 6 HOH A 81 349 92 HOH HOH . I 6 HOH A 82 350 93 HOH HOH . I 6 HOH A 83 351 95 HOH HOH . I 6 HOH A 84 352 96 HOH HOH . I 6 HOH A 85 353 97 HOH HOH . I 6 HOH A 86 354 99 HOH HOH . I 6 HOH A 87 355 100 HOH HOH . I 6 HOH A 88 356 101 HOH HOH . I 6 HOH A 89 357 102 HOH HOH . I 6 HOH A 90 358 103 HOH HOH . I 6 HOH A 91 359 104 HOH HOH . I 6 HOH A 92 360 105 HOH HOH . I 6 HOH A 93 361 106 HOH HOH . I 6 HOH A 94 362 107 HOH HOH . I 6 HOH A 95 363 108 HOH HOH . I 6 HOH A 96 364 109 HOH HOH . I 6 HOH A 97 365 110 HOH HOH . I 6 HOH A 98 366 111 HOH HOH . I 6 HOH A 99 367 112 HOH HOH . I 6 HOH A 100 368 113 HOH HOH . I 6 HOH A 101 369 115 HOH HOH . I 6 HOH A 102 370 116 HOH HOH . I 6 HOH A 103 371 117 HOH HOH . I 6 HOH A 104 372 118 HOH HOH . I 6 HOH A 105 373 119 HOH HOH . J 6 HOH Y 1 120 120 HOH HOH . J 6 HOH Y 2 121 121 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 5 _atom_site.Cartn_x 9.041 _atom_site.Cartn_y -10.341 _atom_site.Cartn_z -15.091 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 1.69 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 267 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 365 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #