data_2OY9 # _model_server_result.job_id 4xtporfH2mSPzw9NwCqvFA _model_server_result.datetime_utc '2024-10-18 23:34:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2oy9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":400}' # _entry.id 2OY9 # _exptl.entry_id 2OY9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2OY9 _cell.length_a 91.568 _cell.length_b 91.568 _cell.length_c 47.241 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OY9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 83 A GLU 83 1_555 A N MSE 84 A MSE 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C MSE 84 A MSE 84 1_555 A N GLU 85 A GLU 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C GLN 89 A GLN 89 1_555 A N MSE 90 A MSE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 B C GLU 83 B GLU 83 1_555 B N MSE 84 B MSE 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 B C MSE 84 B MSE 84 1_555 B N GLU 85 B GLU 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 B C GLN 89 B GLN 89 1_555 B N MSE 90 B MSE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 C MG MG . B MG 400 1_555 E O HOH . B HOH 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.893 ? metalc ? metalc2 C MG MG . B MG 400 1_555 E O HOH . B HOH 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc3 C MG MG . B MG 400 1_555 E O HOH . B HOH 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc4 C MG MG . B MG 400 1_555 E O HOH . B HOH 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc5 C MG MG . B MG 400 1_555 E O HOH . B HOH 460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc6 C MG MG . B MG 400 1_555 E O HOH . B HOH 461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2OY9 _atom_sites.fract_transf_matrix[1][1] 0.010921 _atom_sites.fract_transf_matrix[1][2] 0.006305 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01261 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021168 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG B 1 400 400 MG MG2 . D 3 HOH A 1 99 2 HOH TIP . D 3 HOH A 2 100 3 HOH TIP . D 3 HOH A 3 101 4 HOH TIP . D 3 HOH A 4 102 7 HOH TIP . D 3 HOH A 5 103 9 HOH TIP . D 3 HOH A 6 104 12 HOH TIP . D 3 HOH A 7 105 13 HOH TIP . D 3 HOH A 8 106 15 HOH TIP . D 3 HOH A 9 107 17 HOH TIP . D 3 HOH A 10 108 18 HOH TIP . D 3 HOH A 11 109 19 HOH TIP . D 3 HOH A 12 110 20 HOH TIP . D 3 HOH A 13 111 21 HOH TIP . D 3 HOH A 14 112 22 HOH TIP . D 3 HOH A 15 113 23 HOH TIP . D 3 HOH A 16 114 24 HOH TIP . D 3 HOH A 17 115 26 HOH TIP . D 3 HOH A 18 116 27 HOH TIP . D 3 HOH A 19 117 29 HOH TIP . D 3 HOH A 20 118 31 HOH TIP . D 3 HOH A 21 119 33 HOH TIP . D 3 HOH A 22 120 34 HOH TIP . D 3 HOH A 23 121 35 HOH TIP . D 3 HOH A 24 122 36 HOH TIP . D 3 HOH A 25 123 40 HOH TIP . D 3 HOH A 26 124 41 HOH TIP . D 3 HOH A 27 125 43 HOH TIP . D 3 HOH A 28 126 46 HOH TIP . D 3 HOH A 29 127 48 HOH TIP . D 3 HOH A 30 128 49 HOH TIP . D 3 HOH A 31 129 50 HOH TIP . D 3 HOH A 32 130 51 HOH TIP . D 3 HOH A 33 131 52 HOH TIP . D 3 HOH A 34 132 54 HOH TIP . D 3 HOH A 35 133 56 HOH TIP . D 3 HOH A 36 134 57 HOH TIP . D 3 HOH A 37 135 58 HOH TIP . D 3 HOH A 38 136 61 HOH TIP . D 3 HOH A 39 137 62 HOH TIP . D 3 HOH A 40 138 63 HOH TIP . D 3 HOH A 41 139 64 HOH TIP . D 3 HOH A 42 140 66 HOH TIP . D 3 HOH A 43 141 67 HOH TIP . D 3 HOH A 44 142 69 HOH TIP . D 3 HOH A 45 143 72 HOH TIP . D 3 HOH A 46 144 73 HOH TIP . D 3 HOH A 47 145 74 HOH TIP . D 3 HOH A 48 146 75 HOH TIP . D 3 HOH A 49 147 78 HOH TIP . D 3 HOH A 50 148 79 HOH TIP . D 3 HOH A 51 149 80 HOH TIP . D 3 HOH A 52 150 81 HOH TIP . D 3 HOH A 53 151 82 HOH TIP . D 3 HOH A 54 152 86 HOH TIP . D 3 HOH A 55 153 87 HOH TIP . D 3 HOH A 56 154 89 HOH TIP . D 3 HOH A 57 155 90 HOH TIP . D 3 HOH A 58 156 95 HOH TIP . D 3 HOH A 59 157 96 HOH TIP . D 3 HOH A 60 158 98 HOH TIP . D 3 HOH A 61 159 102 HOH TIP . D 3 HOH A 62 160 104 HOH TIP . D 3 HOH A 63 161 106 HOH TIP . D 3 HOH A 64 162 108 HOH TIP . D 3 HOH A 65 163 110 HOH TIP . D 3 HOH A 66 164 112 HOH TIP . D 3 HOH A 67 165 114 HOH TIP . D 3 HOH A 68 166 119 HOH TIP . D 3 HOH A 69 167 123 HOH TIP . D 3 HOH A 70 168 124 HOH TIP . D 3 HOH A 71 169 126 HOH TIP . D 3 HOH A 72 170 128 HOH TIP . E 3 HOH B 1 401 1 HOH TIP . E 3 HOH B 2 402 5 HOH TIP . E 3 HOH B 3 403 6 HOH TIP . E 3 HOH B 4 404 8 HOH TIP . E 3 HOH B 5 405 10 HOH TIP . E 3 HOH B 6 406 11 HOH TIP . E 3 HOH B 7 407 14 HOH TIP . E 3 HOH B 8 408 16 HOH TIP . E 3 HOH B 9 409 25 HOH TIP . E 3 HOH B 10 410 28 HOH TIP . E 3 HOH B 11 411 30 HOH TIP . E 3 HOH B 12 412 32 HOH TIP . E 3 HOH B 13 413 37 HOH TIP . E 3 HOH B 14 414 38 HOH TIP . E 3 HOH B 15 415 39 HOH TIP . E 3 HOH B 16 416 42 HOH TIP . E 3 HOH B 17 417 44 HOH TIP . E 3 HOH B 18 418 45 HOH TIP . E 3 HOH B 19 419 47 HOH TIP . E 3 HOH B 20 420 53 HOH TIP . E 3 HOH B 21 421 55 HOH TIP . E 3 HOH B 22 422 59 HOH TIP . E 3 HOH B 23 423 60 HOH TIP . E 3 HOH B 24 424 65 HOH TIP . E 3 HOH B 25 425 68 HOH TIP . E 3 HOH B 26 426 70 HOH TIP . E 3 HOH B 27 427 71 HOH TIP . E 3 HOH B 28 428 76 HOH TIP . E 3 HOH B 29 429 77 HOH TIP . E 3 HOH B 30 430 83 HOH TIP . E 3 HOH B 31 431 84 HOH TIP . E 3 HOH B 32 432 85 HOH TIP . E 3 HOH B 33 433 88 HOH TIP . E 3 HOH B 34 434 91 HOH TIP . E 3 HOH B 35 435 92 HOH TIP . E 3 HOH B 36 436 93 HOH TIP . E 3 HOH B 37 437 94 HOH TIP . E 3 HOH B 38 438 97 HOH TIP . E 3 HOH B 39 439 99 HOH TIP . E 3 HOH B 40 440 100 HOH TIP . E 3 HOH B 41 441 101 HOH TIP . E 3 HOH B 42 442 103 HOH TIP . E 3 HOH B 43 443 105 HOH TIP . E 3 HOH B 44 444 107 HOH TIP . E 3 HOH B 45 445 109 HOH TIP . E 3 HOH B 46 446 111 HOH TIP . E 3 HOH B 47 447 113 HOH TIP . E 3 HOH B 48 448 115 HOH TIP . E 3 HOH B 49 449 116 HOH TIP . E 3 HOH B 50 450 117 HOH TIP . E 3 HOH B 51 451 118 HOH TIP . E 3 HOH B 52 452 120 HOH TIP . E 3 HOH B 53 453 121 HOH TIP . E 3 HOH B 54 454 122 HOH TIP . E 3 HOH B 55 455 125 HOH TIP . E 3 HOH B 56 456 127 HOH TIP . E 3 HOH B 57 457 129 HOH TIP . E 3 HOH B 58 458 130 HOH TIP . E 3 HOH B 59 459 131 HOH TIP . E 3 HOH B 60 460 132 HOH TIP . E 3 HOH B 61 461 133 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -12.698 _atom_site.Cartn_y 93.824 _atom_site.Cartn_z 1.223 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 400 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #