data_2OZ6 # _model_server_result.job_id vWqwu9bw0pGxK6cNC6FwcA _model_server_result.datetime_utc '2024-12-21 12:15:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2oz6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 2OZ6 # _exptl.entry_id 2OZ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 329.206 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2OZ6 _cell.length_a 69.95 _cell.length_b 69.95 _cell.length_c 147.49 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2OZ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_465 -x-1,-y+1,z -1 0 0 0 -1 0 0 0 1 -69.95 69.95 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C10 H12 N5 O6 P' _chem_comp.formula_weight 329.206 _chem_comp.id CMP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'CYCLIC AMP;CAMP' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P CMP doub 70 n n P O2P CMP sing 71 n n P O5' CMP sing 72 n n P O3' CMP sing 73 n n O2P HOP2 CMP sing 74 n n O5' C5' CMP sing 75 n n C5' C4' CMP sing 76 n n C5' "H5'1" CMP sing 77 n n C5' "H5'2" CMP sing 78 n n C4' O4' CMP sing 79 n n C4' C3' CMP sing 80 n n C4' H4' CMP sing 81 n n O4' C1' CMP sing 82 n n C3' O3' CMP sing 83 n n C3' C2' CMP sing 84 n n C3' H3' CMP sing 85 n n C2' O2' CMP sing 86 n n C2' C1' CMP sing 87 n n C2' H2' CMP sing 88 n n O2' HO2' CMP sing 89 n n C1' N9 CMP sing 90 n n C1' H1' CMP sing 91 n n N9 C8 CMP sing 92 n y N9 C4 CMP sing 93 n y C8 N7 CMP doub 94 n y C8 H8 CMP sing 95 n n N7 C5 CMP sing 96 n y C5 C6 CMP sing 97 n y C5 C4 CMP doub 98 n y C6 N6 CMP sing 99 n n C6 N1 CMP doub 100 n y N6 HN61 CMP sing 101 n n N6 HN62 CMP sing 102 n n N1 C2 CMP sing 103 n y C2 N3 CMP doub 104 n y C2 H2 CMP sing 105 n n N3 C4 CMP sing 106 n y # _atom_sites.entry_id 2OZ6 _atom_sites.fract_transf_matrix[1][1] 0.014296 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014296 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00678 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CMP A 1 302 302 CMP CMP . C 2 CMP A 1 301 301 CMP CMP . D 3 HOH A 1 303 304 HOH HOH . D 3 HOH A 2 304 305 HOH HOH . D 3 HOH A 3 305 306 HOH HOH . D 3 HOH A 4 306 307 HOH HOH . D 3 HOH A 5 307 308 HOH HOH . D 3 HOH A 6 308 309 HOH HOH . D 3 HOH A 7 309 310 HOH HOH . D 3 HOH A 8 310 312 HOH HOH . D 3 HOH A 9 311 314 HOH HOH . D 3 HOH A 10 312 315 HOH HOH . D 3 HOH A 11 313 316 HOH HOH . D 3 HOH A 12 314 317 HOH HOH . D 3 HOH A 13 315 318 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P CMP . . . C 2 -26.966 42.915 -4.483 1 31.84 ? P CMP 301 A 1 HETATM 2 O O1P CMP . . . C 2 -28.027 43.481 -3.58 1 32.49 ? O1P CMP 301 A 1 HETATM 3 O O2P CMP . . . C 2 -26.936 43.741 -5.738 1 28.67 ? O2P CMP 301 A 1 HETATM 4 O O5' CMP . . . C 2 -25.641 42.958 -3.722 1 31.37 ? O5' CMP 301 A 1 HETATM 5 C C5' CMP . . . C 2 -25.491 42.182 -2.502 1 28.49 ? C5' CMP 301 A 1 HETATM 6 C C4' CMP . . . C 2 -25.539 40.762 -3.077 1 32.12 ? C4' CMP 301 A 1 HETATM 7 O O4' CMP . . . C 2 -25.435 39.713 -2.1 1 32.57 ? O4' CMP 301 A 1 HETATM 8 C C3' CMP . . . C 2 -26.893 40.55 -3.776 1 31.1 ? C3' CMP 301 A 1 HETATM 9 O O3' CMP . . . C 2 -27.093 41.441 -4.868 1 31.58 ? O3' CMP 301 A 1 HETATM 10 C C2' CMP . . . C 2 -26.934 39.042 -3.84 1 29.35 ? C2' CMP 301 A 1 HETATM 11 O O2' CMP . . . C 2 -26.112 38.475 -4.809 1 29.62 ? O2' CMP 301 A 1 HETATM 12 C C1' CMP . . . C 2 -26.609 38.911 -2.289 1 30.23 ? C1' CMP 301 A 1 HETATM 13 N N9 CMP . . . C 2 -27.578 38.128 -1.383 1 29.38 ? N9 CMP 301 A 1 HETATM 14 C C8 CMP . . . C 2 -28.439 38.973 -0.636 1 29.33 ? C8 CMP 301 A 1 HETATM 15 N N7 CMP . . . C 2 -29.292 38.384 0.141 1 31.18 ? N7 CMP 301 A 1 HETATM 16 C C5 CMP . . . C 2 -28.981 37.054 -0.086 1 29.9 ? C5 CMP 301 A 1 HETATM 17 C C6 CMP . . . C 2 -29.486 35.822 0.403 1 27.78 ? C6 CMP 301 A 1 HETATM 18 N N6 CMP . . . C 2 -30.472 35.747 1.287 1 26.62 ? N6 CMP 301 A 1 HETATM 19 N N1 CMP . . . C 2 -28.881 34.675 -0.101 1 26.38 ? N1 CMP 301 A 1 HETATM 20 C C2 CMP . . . C 2 -27.867 34.605 -1.004 1 24.44 ? C2 CMP 301 A 1 HETATM 21 N N3 CMP . . . C 2 -27.338 35.75 -1.509 1 27.87 ? N3 CMP 301 A 1 HETATM 22 C C4 CMP . . . C 2 -27.96 36.85 -0.988 1 30.59 ? C4 CMP 301 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 22 #