data_2P06 # _model_server_result.job_id 5p2jr-PL71hrH7J3CgIq3Q _model_server_result.datetime_utc '2024-10-19 16:42:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2p06 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 2P06 # _exptl.entry_id 2P06 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2P06 _cell.length_a 80.083 _cell.length_b 80.083 _cell.length_c 106.771 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2P06 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_674 x-y+1,-y+2,-z-1/3 1 0 0 0 -1 0 0 0 -1 0 138.707825 -35.590333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 22 A MSE 1 1_555 A N ASP 23 A ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 A C GLU 34 A GLU 13 1_555 A N MSE 35 A MSE 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 A C MSE 35 A MSE 14 1_555 A N HIS 36 A HIS 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale4 A C TYR 39 A TYR 18 1_555 A N MSE 40 A MSE 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale5 A C MSE 40 A MSE 19 1_555 A N LYS 41 A LYS 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C GLU 68 A GLU 47 1_555 A N MSE 69 A MSE 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 A C MSE 69 A MSE 48 1_555 A N ASP 70 A ASP 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 A C CYS 95 A CYS 74 1_555 A N MSE 96 A MSE 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 A C MSE 96 A MSE 75 1_555 A N TYR 97 A TYR 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale10 B C GLY 21 B GLY 0 1_555 B N MSE 22 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 B C MSE 22 B MSE 1 1_555 B N ASP 23 B ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 B C GLU 34 B GLU 13 1_555 B N MSE 35 B MSE 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale13 B C MSE 35 B MSE 14 1_555 B N HIS 36 B HIS 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale14 B C TYR 39 B TYR 18 1_555 B N MSE 40 B MSE 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale15 B C MSE 40 B MSE 19 1_555 B N LYS 41 B LYS 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale16 B C GLU 68 B GLU 47 1_555 B N MSE 69 B MSE 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale17 B C MSE 69 B MSE 48 1_555 B N ASP 70 B ASP 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale18 B C CYS 95 B CYS 74 1_555 B N MSE 96 B MSE 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale19 B C MSE 96 B MSE 75 1_555 B N TYR 97 B TYR 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? metalc ? metalc1 A OE1 GLU 68 A GLU 47 1_555 C MG MG . A MG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc2 A OE1 GLU 71 A GLU 50 1_555 C MG MG . A MG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc3 A OE1 GLU 87 A GLU 66 1_555 C MG MG . A MG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc4 A OE2 GLU 87 A GLU 66 1_555 C MG MG . A MG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc5 A OD2 ASP 90 A ASP 69 1_555 C MG MG . A MG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc6 B OE1 GLU 68 B GLU 47 1_555 E MG MG . B MG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc7 B OE1 GLU 71 B GLU 50 1_555 E MG MG . B MG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc8 B OE1 GLU 87 B GLU 66 1_555 E MG MG . B MG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc9 B OD2 ASP 90 B ASP 69 1_555 E MG MG . B MG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc10 C MG MG . A MG 101 1_555 F O HOH . A HOH 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc11 E MG MG . B MG 101 1_555 G O HOH . B HOH 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc12 E MG MG . B MG 101 1_555 G O HOH . B HOH 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2P06 _atom_sites.fract_transf_matrix[1][1] 0.012487 _atom_sites.fract_transf_matrix[1][2] 0.007209 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014419 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009366 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 101 1 MG MG . D 3 GOL A 1 102 1 GOL GOL . E 2 MG B 1 101 1 MG MG . F 4 HOH A 1 103 6 HOH HOH . F 4 HOH A 2 104 7 HOH HOH . F 4 HOH A 3 105 8 HOH HOH . F 4 HOH A 4 106 9 HOH HOH . F 4 HOH A 5 107 11 HOH HOH . F 4 HOH A 6 108 13 HOH HOH . F 4 HOH A 7 109 14 HOH HOH . F 4 HOH A 8 110 15 HOH HOH . F 4 HOH A 9 111 17 HOH HOH . F 4 HOH A 10 112 18 HOH HOH . F 4 HOH A 11 113 20 HOH HOH . F 4 HOH A 12 114 22 HOH HOH . F 4 HOH A 13 115 26 HOH HOH . F 4 HOH A 14 116 28 HOH HOH . F 4 HOH A 15 117 32 HOH HOH . F 4 HOH A 16 118 34 HOH HOH . F 4 HOH A 17 119 38 HOH HOH . F 4 HOH A 18 120 42 HOH HOH . F 4 HOH A 19 121 47 HOH HOH . F 4 HOH A 20 122 48 HOH HOH . F 4 HOH A 21 123 49 HOH HOH . F 4 HOH A 22 124 51 HOH HOH . F 4 HOH A 23 125 52 HOH HOH . F 4 HOH A 24 126 57 HOH HOH . F 4 HOH A 25 127 63 HOH HOH . F 4 HOH A 26 128 66 HOH HOH . F 4 HOH A 27 129 68 HOH HOH . F 4 HOH A 28 130 69 HOH HOH . F 4 HOH A 29 131 73 HOH HOH . F 4 HOH A 30 132 74 HOH HOH . F 4 HOH A 31 133 80 HOH HOH . F 4 HOH A 32 134 84 HOH HOH . F 4 HOH A 33 135 85 HOH HOH . F 4 HOH A 34 136 86 HOH HOH . F 4 HOH A 35 137 88 HOH HOH . F 4 HOH A 36 138 96 HOH HOH . F 4 HOH A 37 139 97 HOH HOH . F 4 HOH A 38 140 99 HOH HOH . F 4 HOH A 39 141 100 HOH HOH . F 4 HOH A 40 142 102 HOH HOH . F 4 HOH A 41 143 109 HOH HOH . F 4 HOH A 42 144 112 HOH HOH . F 4 HOH A 43 145 114 HOH HOH . F 4 HOH A 44 146 116 HOH HOH . F 4 HOH A 45 147 117 HOH HOH . F 4 HOH A 46 148 119 HOH HOH . F 4 HOH A 47 149 120 HOH HOH . F 4 HOH A 48 150 122 HOH HOH . F 4 HOH A 49 151 123 HOH HOH . F 4 HOH A 50 152 124 HOH HOH . F 4 HOH A 51 153 129 HOH HOH . F 4 HOH A 52 154 130 HOH HOH . F 4 HOH A 53 155 132 HOH HOH . F 4 HOH A 54 156 134 HOH HOH . F 4 HOH A 55 157 137 HOH HOH . F 4 HOH A 56 158 139 HOH HOH . F 4 HOH A 57 159 142 HOH HOH . F 4 HOH A 58 160 143 HOH HOH . F 4 HOH A 59 161 144 HOH HOH . F 4 HOH A 60 162 146 HOH HOH . F 4 HOH A 61 163 147 HOH HOH . F 4 HOH A 62 164 148 HOH HOH . F 4 HOH A 63 165 153 HOH HOH . F 4 HOH A 64 166 154 HOH HOH . G 4 HOH B 1 102 1 HOH HOH . G 4 HOH B 2 103 3 HOH HOH . G 4 HOH B 3 104 4 HOH HOH . G 4 HOH B 4 105 10 HOH HOH . G 4 HOH B 5 106 16 HOH HOH . G 4 HOH B 6 107 19 HOH HOH . G 4 HOH B 7 108 21 HOH HOH . G 4 HOH B 8 109 23 HOH HOH . G 4 HOH B 9 110 27 HOH HOH . G 4 HOH B 10 111 29 HOH HOH . G 4 HOH B 11 112 30 HOH HOH . G 4 HOH B 12 113 33 HOH HOH . G 4 HOH B 13 114 35 HOH HOH . G 4 HOH B 14 115 37 HOH HOH . G 4 HOH B 15 116 45 HOH HOH . G 4 HOH B 16 117 46 HOH HOH . G 4 HOH B 17 118 50 HOH HOH . G 4 HOH B 18 119 53 HOH HOH . G 4 HOH B 19 120 54 HOH HOH . G 4 HOH B 20 121 61 HOH HOH . G 4 HOH B 21 122 62 HOH HOH . G 4 HOH B 22 123 64 HOH HOH . G 4 HOH B 23 124 65 HOH HOH . G 4 HOH B 24 125 67 HOH HOH . G 4 HOH B 25 126 71 HOH HOH . G 4 HOH B 26 127 72 HOH HOH . G 4 HOH B 27 128 76 HOH HOH . G 4 HOH B 28 129 77 HOH HOH . G 4 HOH B 29 130 78 HOH HOH . G 4 HOH B 30 131 81 HOH HOH . G 4 HOH B 31 132 82 HOH HOH . G 4 HOH B 32 133 83 HOH HOH . G 4 HOH B 33 134 87 HOH HOH . G 4 HOH B 34 135 89 HOH HOH . G 4 HOH B 35 136 90 HOH HOH . G 4 HOH B 36 137 91 HOH HOH . G 4 HOH B 37 138 93 HOH HOH . G 4 HOH B 38 139 94 HOH HOH . G 4 HOH B 39 140 95 HOH HOH . G 4 HOH B 40 141 98 HOH HOH . G 4 HOH B 41 142 101 HOH HOH . G 4 HOH B 42 143 105 HOH HOH . G 4 HOH B 43 144 107 HOH HOH . G 4 HOH B 44 145 110 HOH HOH . G 4 HOH B 45 146 113 HOH HOH . G 4 HOH B 46 147 121 HOH HOH . G 4 HOH B 47 148 125 HOH HOH . G 4 HOH B 48 149 126 HOH HOH . G 4 HOH B 49 150 128 HOH HOH . G 4 HOH B 50 151 133 HOH HOH . G 4 HOH B 51 152 135 HOH HOH . G 4 HOH B 52 153 136 HOH HOH . G 4 HOH B 53 154 138 HOH HOH . G 4 HOH B 54 155 140 HOH HOH . G 4 HOH B 55 156 141 HOH HOH . G 4 HOH B 56 157 145 HOH HOH . G 4 HOH B 57 158 149 HOH HOH . G 4 HOH B 58 159 150 HOH HOH . G 4 HOH B 59 160 151 HOH HOH . G 4 HOH B 60 161 155 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 9.373 _atom_site.Cartn_y 65.156 _atom_site.Cartn_z 1.208 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 12.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 101 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #