data_2P0S # _model_server_result.job_id 9TyaRbPwrOwMGWpPl-DyDQ _model_server_result.datetime_utc '2024-10-19 01:48:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2p0s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 2P0S # _exptl.entry_id 2P0S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2P0S _cell.length_a 36.88 _cell.length_b 59.965 _cell.length_c 110.035 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2P0S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 8 A ASP 48 1_555 A N MSE 9 A MSE 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale2 A C MSE 9 A MSE 49 1_555 A N LYS 10 A LYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? covale ? covale3 A C LYS 45 A LYS 85 1_555 A N MSE 46 A MSE 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C MSE 46 A MSE 86 1_555 A N GLY 47 A GLY 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? metalc ? metalc1 C MG MG . A MG 401 1_555 G O HOH . A HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc2 C MG MG . A MG 401 1_555 A OD2 ASP 62 A ASP 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc3 C MG MG . A MG 401 1_555 G O HOH . A HOH 686 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc4 C MG MG . A MG 401 1_555 G O HOH . A HOH 688 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc5 C MG MG . A MG 401 1_555 G O HOH . A HOH 687 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc6 C MG MG . A MG 401 1_555 G O HOH . A HOH 673 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? covale ? covale5 B C ASP 8 B ASP 48 1_555 B N MSE 9 B MSE 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 B C MSE 9 B MSE 49 1_555 B N LYS 10 B LYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 B C LYS 45 B LYS 85 1_555 B N MSE 46 B MSE 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale8 B C MSE 46 B MSE 86 1_555 B N GLY 47 B GLY 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2P0S _atom_sites.fract_transf_matrix[1][1] 0.027115 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016676 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009088 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 401 1 MG MG . D 3 ACT A 1 501 1 ACT ACT . E 4 FMT A 1 602 2 FMT FMT . F 4 FMT B 1 601 1 FMT FMT . G 5 HOH A 1 603 4 HOH HOH . G 5 HOH A 2 604 8 HOH HOH . G 5 HOH A 3 605 20 HOH HOH . G 5 HOH A 4 606 21 HOH HOH . G 5 HOH A 5 607 22 HOH HOH . G 5 HOH A 6 608 28 HOH HOH . G 5 HOH A 7 609 31 HOH HOH . G 5 HOH A 8 610 34 HOH HOH . G 5 HOH A 9 611 39 HOH HOH . G 5 HOH A 10 612 41 HOH HOH . G 5 HOH A 11 613 43 HOH HOH . G 5 HOH A 12 614 44 HOH HOH . G 5 HOH A 13 615 48 HOH HOH . G 5 HOH A 14 616 53 HOH HOH . G 5 HOH A 15 617 54 HOH HOH . G 5 HOH A 16 618 56 HOH HOH . G 5 HOH A 17 619 60 HOH HOH . G 5 HOH A 18 620 63 HOH HOH . G 5 HOH A 19 621 65 HOH HOH . G 5 HOH A 20 622 72 HOH HOH . G 5 HOH A 21 623 73 HOH HOH . G 5 HOH A 22 624 74 HOH HOH . G 5 HOH A 23 625 90 HOH HOH . G 5 HOH A 24 626 93 HOH HOH . G 5 HOH A 25 627 98 HOH HOH . G 5 HOH A 26 628 99 HOH HOH . G 5 HOH A 27 629 100 HOH HOH . G 5 HOH A 28 630 105 HOH HOH . G 5 HOH A 29 631 111 HOH HOH . G 5 HOH A 30 632 113 HOH HOH . G 5 HOH A 31 633 120 HOH HOH . G 5 HOH A 32 634 125 HOH HOH . G 5 HOH A 33 635 138 HOH HOH . G 5 HOH A 34 636 148 HOH HOH . G 5 HOH A 35 637 152 HOH HOH . G 5 HOH A 36 638 154 HOH HOH . G 5 HOH A 37 639 157 HOH HOH . G 5 HOH A 38 640 161 HOH HOH . G 5 HOH A 39 641 169 HOH HOH . G 5 HOH A 40 642 170 HOH HOH . G 5 HOH A 41 643 185 HOH HOH . G 5 HOH A 42 644 187 HOH HOH . G 5 HOH A 43 645 192 HOH HOH . G 5 HOH A 44 646 193 HOH HOH . G 5 HOH A 45 647 212 HOH HOH . G 5 HOH A 46 648 213 HOH HOH . G 5 HOH A 47 649 215 HOH HOH . G 5 HOH A 48 650 216 HOH HOH . G 5 HOH A 49 651 223 HOH HOH . G 5 HOH A 50 652 224 HOH HOH . G 5 HOH A 51 653 230 HOH HOH . G 5 HOH A 52 654 233 HOH HOH . G 5 HOH A 53 655 234 HOH HOH . G 5 HOH A 54 656 248 HOH HOH . G 5 HOH A 55 657 251 HOH HOH . G 5 HOH A 56 658 256 HOH HOH . G 5 HOH A 57 659 259 HOH HOH . G 5 HOH A 58 660 262 HOH HOH . G 5 HOH A 59 661 265 HOH HOH . G 5 HOH A 60 662 273 HOH HOH . G 5 HOH A 61 663 274 HOH HOH . G 5 HOH A 62 664 276 HOH HOH . G 5 HOH A 63 665 277 HOH HOH . G 5 HOH A 64 666 292 HOH HOH . G 5 HOH A 65 667 294 HOH HOH . G 5 HOH A 66 668 301 HOH HOH . G 5 HOH A 67 669 317 HOH HOH . G 5 HOH A 68 670 322 HOH HOH . G 5 HOH A 69 671 326 HOH HOH . G 5 HOH A 70 672 333 HOH HOH . G 5 HOH A 71 673 340 HOH HOH . G 5 HOH A 72 674 341 HOH HOH . G 5 HOH A 73 675 342 HOH HOH . G 5 HOH A 74 676 350 HOH HOH . G 5 HOH A 75 677 352 HOH HOH . G 5 HOH A 76 678 356 HOH HOH . G 5 HOH A 77 679 361 HOH HOH . G 5 HOH A 78 680 364 HOH HOH . G 5 HOH A 79 681 367 HOH HOH . G 5 HOH A 80 682 368 HOH HOH . G 5 HOH A 81 683 369 HOH HOH . G 5 HOH A 82 684 370 HOH HOH . G 5 HOH A 83 685 371 HOH HOH . G 5 HOH A 84 686 372 HOH HOH . G 5 HOH A 85 687 373 HOH HOH . G 5 HOH A 86 688 374 HOH HOH . G 5 HOH A 87 689 375 HOH HOH . G 5 HOH A 88 690 376 HOH HOH . G 5 HOH A 89 691 377 HOH HOH . G 5 HOH A 90 692 378 HOH HOH . G 5 HOH A 91 693 379 HOH HOH . G 5 HOH A 92 694 382 HOH HOH . G 5 HOH A 93 695 383 HOH HOH . H 5 HOH B 1 602 2 HOH HOH . H 5 HOH B 2 603 3 HOH HOH . H 5 HOH B 3 604 5 HOH HOH . H 5 HOH B 4 605 7 HOH HOH . H 5 HOH B 5 606 9 HOH HOH . H 5 HOH B 6 607 11 HOH HOH . H 5 HOH B 7 608 12 HOH HOH . H 5 HOH B 8 609 14 HOH HOH . H 5 HOH B 9 610 15 HOH HOH . H 5 HOH B 10 611 17 HOH HOH . H 5 HOH B 11 612 23 HOH HOH . H 5 HOH B 12 613 24 HOH HOH . H 5 HOH B 13 614 26 HOH HOH . H 5 HOH B 14 615 32 HOH HOH . H 5 HOH B 15 616 33 HOH HOH . H 5 HOH B 16 617 35 HOH HOH . H 5 HOH B 17 618 37 HOH HOH . H 5 HOH B 18 619 40 HOH HOH . H 5 HOH B 19 620 42 HOH HOH . H 5 HOH B 20 621 50 HOH HOH . H 5 HOH B 21 622 51 HOH HOH . H 5 HOH B 22 623 52 HOH HOH . H 5 HOH B 23 624 55 HOH HOH . H 5 HOH B 24 625 57 HOH HOH . H 5 HOH B 25 626 58 HOH HOH . H 5 HOH B 26 627 59 HOH HOH . H 5 HOH B 27 628 64 HOH HOH . H 5 HOH B 28 629 70 HOH HOH . H 5 HOH B 29 630 75 HOH HOH . H 5 HOH B 30 631 77 HOH HOH . H 5 HOH B 31 632 78 HOH HOH . H 5 HOH B 32 633 80 HOH HOH . H 5 HOH B 33 634 84 HOH HOH . H 5 HOH B 34 635 87 HOH HOH . H 5 HOH B 35 636 88 HOH HOH . H 5 HOH B 36 637 94 HOH HOH . H 5 HOH B 37 638 102 HOH HOH . H 5 HOH B 38 639 104 HOH HOH . H 5 HOH B 39 640 121 HOH HOH . H 5 HOH B 40 641 128 HOH HOH . H 5 HOH B 41 642 129 HOH HOH . H 5 HOH B 42 643 132 HOH HOH . H 5 HOH B 43 644 135 HOH HOH . H 5 HOH B 44 645 139 HOH HOH . H 5 HOH B 45 646 140 HOH HOH . H 5 HOH B 46 647 147 HOH HOH . H 5 HOH B 47 648 149 HOH HOH . H 5 HOH B 48 649 188 HOH HOH . H 5 HOH B 49 650 206 HOH HOH . H 5 HOH B 50 651 211 HOH HOH . H 5 HOH B 51 652 217 HOH HOH . H 5 HOH B 52 653 218 HOH HOH . H 5 HOH B 53 654 220 HOH HOH . H 5 HOH B 54 655 221 HOH HOH . H 5 HOH B 55 656 225 HOH HOH . H 5 HOH B 56 657 228 HOH HOH . H 5 HOH B 57 658 232 HOH HOH . H 5 HOH B 58 659 235 HOH HOH . H 5 HOH B 59 660 236 HOH HOH . H 5 HOH B 60 661 239 HOH HOH . H 5 HOH B 61 662 241 HOH HOH . H 5 HOH B 62 663 247 HOH HOH . H 5 HOH B 63 664 257 HOH HOH . H 5 HOH B 64 665 266 HOH HOH . H 5 HOH B 65 666 270 HOH HOH . H 5 HOH B 66 667 278 HOH HOH . H 5 HOH B 67 668 283 HOH HOH . H 5 HOH B 68 669 284 HOH HOH . H 5 HOH B 69 670 286 HOH HOH . H 5 HOH B 70 671 289 HOH HOH . H 5 HOH B 71 672 295 HOH HOH . H 5 HOH B 72 673 302 HOH HOH . H 5 HOH B 73 674 307 HOH HOH . H 5 HOH B 74 675 309 HOH HOH . H 5 HOH B 75 676 324 HOH HOH . H 5 HOH B 76 677 328 HOH HOH . H 5 HOH B 77 678 329 HOH HOH . H 5 HOH B 78 679 334 HOH HOH . H 5 HOH B 79 680 335 HOH HOH . H 5 HOH B 80 681 336 HOH HOH . H 5 HOH B 81 682 338 HOH HOH . H 5 HOH B 82 683 346 HOH HOH . H 5 HOH B 83 684 348 HOH HOH . H 5 HOH B 84 685 349 HOH HOH . H 5 HOH B 85 686 353 HOH HOH . H 5 HOH B 86 687 354 HOH HOH . H 5 HOH B 87 688 355 HOH HOH . H 5 HOH B 88 689 358 HOH HOH . H 5 HOH B 89 690 359 HOH HOH . H 5 HOH B 90 691 365 HOH HOH . H 5 HOH B 91 692 366 HOH HOH . H 5 HOH B 92 693 380 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . F 4 47.516 19.34 31.324 1 32.1 ? C FMT 601 B 1 HETATM 2 O O1 FMT . . . F 4 48.387 18.393 31.139 1 32.11 ? O1 FMT 601 B 1 HETATM 3 O O2 FMT . . . F 4 47.587 20.614 31.344 1 28.01 ? O2 FMT 601 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 376 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 3 #