data_2P4G # _model_server_result.job_id a1iOYACynZ6zkJGrJttF2g _model_server_result.datetime_utc '2024-11-02 03:27:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2p4g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":273}' # _entry.id 2P4G # _exptl.entry_id 2P4G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 15 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2P4G _cell.length_a 113.51 _cell.length_b 113.51 _cell.length_c 55.94 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2P4G _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 56.755 98.302544 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PRO 56 A PRO 55 1_555 A N MSE 57 A MSE 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C MSE 57 A MSE 56 1_555 A N GLY 58 A GLY 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 A C GLU 244 A GLU 243 1_555 A N MSE 245 A MSE 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C MSE 245 A MSE 244 1_555 A N LEU 246 A LEU 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # _atom_sites.entry_id 2P4G _atom_sites.fract_transf_matrix[1][1] 0.00881 _atom_sites.fract_transf_matrix[1][2] 0.00509 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01017 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01788 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 270 16 NO3 NO3 . C 3 EDO A 1 271 1 EDO EDO . D 3 EDO A 1 272 2 EDO EDO . E 3 EDO A 1 273 3 EDO EDO . F 3 EDO A 1 274 4 EDO EDO . G 3 EDO A 1 275 5 EDO EDO . H 3 EDO A 1 276 6 EDO EDO . I 3 EDO A 1 277 7 EDO EDO . J 3 EDO A 1 278 8 EDO EDO . K 3 EDO A 1 279 9 EDO EDO . L 3 EDO A 1 280 10 EDO EDO . M 3 EDO A 1 281 11 EDO EDO . N 3 EDO A 1 282 12 EDO EDO . O 3 EDO A 1 283 13 EDO EDO . P 3 EDO A 1 284 14 EDO EDO . Q 3 EDO A 1 285 15 EDO EDO . R 4 HOH A 1 286 17 HOH HOH . R 4 HOH A 2 287 18 HOH HOH . R 4 HOH A 3 288 19 HOH HOH . R 4 HOH A 4 289 20 HOH HOH . R 4 HOH A 5 290 21 HOH HOH . R 4 HOH A 6 291 22 HOH HOH . R 4 HOH A 7 292 23 HOH HOH . R 4 HOH A 8 293 24 HOH HOH . R 4 HOH A 9 294 25 HOH HOH . R 4 HOH A 10 295 26 HOH HOH . R 4 HOH A 11 296 27 HOH HOH . R 4 HOH A 12 297 28 HOH HOH . R 4 HOH A 13 298 29 HOH HOH . R 4 HOH A 14 299 30 HOH HOH . R 4 HOH A 15 300 31 HOH HOH . R 4 HOH A 16 301 32 HOH HOH . R 4 HOH A 17 302 33 HOH HOH . R 4 HOH A 18 303 34 HOH HOH . R 4 HOH A 19 304 35 HOH HOH . R 4 HOH A 20 305 36 HOH HOH . R 4 HOH A 21 306 37 HOH HOH . R 4 HOH A 22 307 38 HOH HOH . R 4 HOH A 23 308 39 HOH HOH . R 4 HOH A 24 309 40 HOH HOH . R 4 HOH A 25 310 41 HOH HOH . R 4 HOH A 26 311 42 HOH HOH . R 4 HOH A 27 312 43 HOH HOH . R 4 HOH A 28 313 44 HOH HOH . R 4 HOH A 29 314 45 HOH HOH . R 4 HOH A 30 315 46 HOH HOH . R 4 HOH A 31 316 47 HOH HOH . R 4 HOH A 32 317 48 HOH HOH . R 4 HOH A 33 318 49 HOH HOH . R 4 HOH A 34 319 50 HOH HOH . R 4 HOH A 35 320 51 HOH HOH . R 4 HOH A 36 321 52 HOH HOH . R 4 HOH A 37 322 53 HOH HOH . R 4 HOH A 38 323 54 HOH HOH . R 4 HOH A 39 324 55 HOH HOH . R 4 HOH A 40 325 56 HOH HOH . R 4 HOH A 41 326 57 HOH HOH . R 4 HOH A 42 327 58 HOH HOH . R 4 HOH A 43 328 59 HOH HOH . R 4 HOH A 44 329 60 HOH HOH . R 4 HOH A 45 330 61 HOH HOH . R 4 HOH A 46 331 62 HOH HOH . R 4 HOH A 47 332 63 HOH HOH . R 4 HOH A 48 333 64 HOH HOH . R 4 HOH A 49 334 65 HOH HOH . R 4 HOH A 50 335 66 HOH HOH . R 4 HOH A 51 336 67 HOH HOH . R 4 HOH A 52 337 68 HOH HOH . R 4 HOH A 53 338 69 HOH HOH . R 4 HOH A 54 339 70 HOH HOH . R 4 HOH A 55 340 71 HOH HOH . R 4 HOH A 56 341 72 HOH HOH . R 4 HOH A 57 342 73 HOH HOH . R 4 HOH A 58 343 74 HOH HOH . R 4 HOH A 59 344 75 HOH HOH . R 4 HOH A 60 345 76 HOH HOH . R 4 HOH A 61 346 77 HOH HOH . R 4 HOH A 62 347 78 HOH HOH . R 4 HOH A 63 348 79 HOH HOH . R 4 HOH A 64 349 80 HOH HOH . R 4 HOH A 65 350 81 HOH HOH . R 4 HOH A 66 351 82 HOH HOH . R 4 HOH A 67 352 83 HOH HOH . R 4 HOH A 68 353 84 HOH HOH . R 4 HOH A 69 354 85 HOH HOH . R 4 HOH A 70 355 86 HOH HOH . R 4 HOH A 71 356 87 HOH HOH . R 4 HOH A 72 357 88 HOH HOH . R 4 HOH A 73 358 89 HOH HOH . R 4 HOH A 74 359 90 HOH HOH . R 4 HOH A 75 360 91 HOH HOH . R 4 HOH A 76 361 92 HOH HOH . R 4 HOH A 77 362 93 HOH HOH . R 4 HOH A 78 363 94 HOH HOH . R 4 HOH A 79 364 95 HOH HOH . R 4 HOH A 80 365 96 HOH HOH . R 4 HOH A 81 366 97 HOH HOH . R 4 HOH A 82 367 98 HOH HOH . R 4 HOH A 83 368 99 HOH HOH . R 4 HOH A 84 369 100 HOH HOH . R 4 HOH A 85 370 101 HOH HOH . R 4 HOH A 86 371 102 HOH HOH . R 4 HOH A 87 372 103 HOH HOH . R 4 HOH A 88 373 104 HOH HOH . R 4 HOH A 89 374 105 HOH HOH . R 4 HOH A 90 375 106 HOH HOH . R 4 HOH A 91 376 107 HOH HOH . R 4 HOH A 92 377 108 HOH HOH . R 4 HOH A 93 378 109 HOH HOH . R 4 HOH A 94 379 110 HOH HOH . R 4 HOH A 95 380 111 HOH HOH . R 4 HOH A 96 381 112 HOH HOH . R 4 HOH A 97 382 113 HOH HOH . R 4 HOH A 98 383 114 HOH HOH . R 4 HOH A 99 384 115 HOH HOH . R 4 HOH A 100 385 116 HOH HOH . R 4 HOH A 101 386 117 HOH HOH . R 4 HOH A 102 387 118 HOH HOH . R 4 HOH A 103 388 119 HOH HOH . R 4 HOH A 104 389 120 HOH HOH . R 4 HOH A 105 390 121 HOH HOH . R 4 HOH A 106 391 122 HOH HOH . R 4 HOH A 107 392 123 HOH HOH . R 4 HOH A 108 393 124 HOH HOH . R 4 HOH A 109 394 125 HOH HOH . R 4 HOH A 110 395 126 HOH HOH . R 4 HOH A 111 396 127 HOH HOH . R 4 HOH A 112 397 128 HOH HOH . R 4 HOH A 113 398 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 56.88 33.494 17.735 1 77.09 ? C1 EDO 273 A 1 HETATM 2 O O1 EDO . . . E 3 56.11 33.529 16.537 1 61.26 ? O1 EDO 273 A 1 HETATM 3 C C2 EDO . . . E 3 56 33.106 18.904 1 78.17 ? C2 EDO 273 A 1 HETATM 4 O O2 EDO . . . E 3 56.505 33.752 20.072 1 87.55 ? O2 EDO 273 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #