data_2P6F
#
_model_server_result.job_id            gVunxGYbQAUBCwtTabCQYA 
_model_server_result.datetime_utc      '2024-10-18 23:26:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2p6f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":602}' 
#
_entry.id    2P6F 
#
_exptl.entry_id    2P6F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              977.89 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            TETRADECANOYL-COA 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.46 
_cell.angle_gamma         90 
_cell.entry_id            2P6F 
_cell.length_a            188.76 
_cell.length_b            151.492 
_cell.length_c            133.939 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2P6F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
? monomeric 1 author_defined_assembly 5 
? monomeric 1 author_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,G,H 1 1 
B,I,J 2 1 
C,K,L 3 1 
D,M,N 4 1 
E,O,P 5 1 
F,Q,R 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 I N N 
? 2 K N N 
? 2 M N N 
? 2 O N N 
? 2 Q N N 
#
_chem_comp.formula           'C35 H62 N7 O17 P3 S' 
_chem_comp.formula_weight    977.89 
_chem_comp.id                MYA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              TETRADECANOYL-COA 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     MYRISTOYL-COA 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2M S1 MYA sing 274 n n 
S1 C2 MYA sing 275 n n 
C2 C3 MYA sing 276 n n 
C2 H2 MYA sing 277 n n 
C2 H2A MYA sing 278 n n 
C3 N4 MYA sing 279 n n 
C3 H3 MYA sing 280 n n 
C3 H3A MYA sing 281 n n 
N4 C5 MYA sing 282 n n 
N4 HN4 MYA sing 283 n n 
O5 C5 MYA doub 284 n n 
C5 C6 MYA sing 285 n n 
C6 C7 MYA sing 286 n n 
C6 H6 MYA sing 287 n n 
C6 H6A MYA sing 288 n n 
N8 C7 MYA sing 289 n n 
C7 H7 MYA sing 290 n n 
C7 H7A MYA sing 291 n n 
C9 N8 MYA sing 292 n n 
N8 HN8 MYA sing 293 n n 
C10 C9 MYA sing 294 n n 
C9 O9 MYA doub 295 n n 
C11 C10 MYA sing 296 n n 
O10 C10 MYA sing 297 n n 
C10 H10 MYA sing 298 n n 
O10 HO10 MYA sing 299 n n 
C12 C11 MYA sing 300 n n 
C13 C11 MYA sing 301 n n 
C11 C14 MYA sing 302 n n 
C12 O6A MYA sing 303 n n 
C12 H12 MYA sing 304 n n 
C12 H12A MYA sing 305 n n 
C13 H13 MYA sing 306 n n 
C13 H13A MYA sing 307 n n 
C13 H13B MYA sing 308 n n 
C14 H14 MYA sing 309 n n 
C14 H14A MYA sing 310 n n 
C14 H14B MYA sing 311 n n 
C2A N1A MYA doub 312 n y 
N1A C6A MYA sing 313 n y 
P1A O1A MYA sing 314 n n 
O1A HO1A MYA sing 315 n n 
O5X P1A MYA sing 316 n n 
O2A P1A MYA doub 317 n n 
P1A O3A MYA sing 318 n n 
C2X C1X MYA sing 319 n n 
C1X O4X MYA sing 320 n n 
C1X N9A MYA sing 321 n n 
C1X H1X MYA sing 322 n n 
N3A C2A MYA sing 323 n y 
C2A H2AA MYA sing 324 n n 
O3A P2A MYA sing 325 n n 
O6A P2A MYA sing 326 n n 
P2A O4A MYA doub 327 n n 
P2A O5A MYA sing 328 n n 
C3M C2M MYA sing 329 n n 
C2M O2M MYA doub 330 n n 
O2X C2X MYA sing 331 n n 
C3X C2X MYA sing 332 n n 
C2X H2X MYA sing 333 n n 
O2X HO2X MYA sing 334 n n 
N3A C4A MYA doub 335 n y 
C4M C3M MYA sing 336 n n 
C3M H3M MYA sing 337 n n 
C3M H3MA MYA sing 338 n n 
O3X C3X MYA sing 339 n n 
C3X C4X MYA sing 340 n n 
C3X H3X MYA sing 341 n n 
P3X O3X MYA sing 342 n n 
O9A P3X MYA doub 343 n n 
O8A P3X MYA sing 344 n n 
P3X O7A MYA sing 345 n n 
C4A N9A MYA sing 346 n y 
C4A C5A MYA sing 347 n y 
C5M C4M MYA sing 348 n n 
C4M H4M MYA sing 349 n n 
C4M H4MA MYA sing 350 n n 
C4X O4X MYA sing 351 n n 
C4X C5X MYA sing 352 n n 
C4X H4X MYA sing 353 n n 
C5A C6A MYA doub 354 n y 
C5A N7A MYA sing 355 n y 
O5A HO5A MYA sing 356 n n 
C6M C5M MYA sing 357 n n 
C5M H5M MYA sing 358 n n 
C5M H5MA MYA sing 359 n n 
C5X O5X MYA sing 360 n n 
C5X H5X MYA sing 361 n n 
C5X H5XA MYA sing 362 n n 
C6A N6A MYA sing 363 n n 
N6A HN6A MYA sing 364 n n 
N6A HN6B MYA sing 365 n n 
C7M C6M MYA sing 366 n n 
C6M H6M MYA sing 367 n n 
C6M H6MA MYA sing 368 n n 
C8A N7A MYA doub 369 n y 
O7A HO7A MYA sing 370 n n 
C8M C7M MYA sing 371 n n 
C7M H7M MYA sing 372 n n 
C7M H7MA MYA sing 373 n n 
N9A C8A MYA sing 374 n y 
C8A H8A MYA sing 375 n n 
O8A HO8A MYA sing 376 n n 
C9M C8M MYA sing 377 n n 
C8M H8M MYA sing 378 n n 
C8M H8MA MYA sing 379 n n 
CAM C9M MYA sing 380 n n 
C9M H9M MYA sing 381 n n 
C9M H9MA MYA sing 382 n n 
CAM CBM MYA sing 383 n n 
CAM HAM MYA sing 384 n n 
CAM HAMA MYA sing 385 n n 
CCM CBM MYA sing 386 n n 
CBM HBM MYA sing 387 n n 
CBM HBMA MYA sing 388 n n 
CDM CCM MYA sing 389 n n 
CCM HCM MYA sing 390 n n 
CCM HCMA MYA sing 391 n n 
CEM CDM MYA sing 392 n n 
CDM HDM MYA sing 393 n n 
CDM HDMA MYA sing 394 n n 
CFM CEM MYA sing 395 n n 
CEM HEM MYA sing 396 n n 
CEM HEMA MYA sing 397 n n 
CFM HFM MYA sing 398 n n 
CFM HFMA MYA sing 399 n n 
CFM HFMB MYA sing 400 n n 
#
_atom_sites.entry_id                     2P6F 
_atom_sites.fract_transf_matrix[1][1]    0.005298 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001666 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006601 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007827 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 MYA A 1 601 601 MYA MYA . 
H 3 GN8 A 1 701 701 GN8 GN8 . 
I 2 MYA B 1 602 602 MYA MYA . 
J 3 GN8 B 1 702 702 GN8 GN8 . 
K 2 MYA C 1 603 603 MYA MYA . 
L 3 GN8 C 1 703 703 GN8 GN8 . 
M 2 MYA D 1 604 604 MYA MYA . 
N 3 GN8 D 1 704 704 GN8 GN8 . 
O 2 MYA E 1 605 605 MYA MYA . 
P 3 GN8 E 1 705 705 GN8 GN8 . 
Q 2 MYA F 1 606 606 MYA MYA . 
R 3 GN8 F 1 706 706 GN8 GN8 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 MYA . . . I 2 16.605 -112.887 59.071 1 26.04 ? S1 MYA 602 B 1 
HETATM 2 C C2 MYA . . . I 2 15.345 -111.668 59.26 1 27.03 ? C2 MYA 602 B 1 
HETATM 3 C C3 MYA . . . I 2 15.93 -110.287 58.982 1 27.66 ? C3 MYA 602 B 1 
HETATM 4 N N4 MYA . . . I 2 14.815 -109.362 59.123 1 28.5 ? N4 MYA 602 B 1 
HETATM 5 C C5 MYA . . . I 2 14.008 -108.919 58.16 1 28.82 ? C5 MYA 602 B 1 
HETATM 6 O O5 MYA . . . I 2 14.126 -109.269 56.993 1 29.41 ? O5 MYA 602 B 1 
HETATM 7 C C6 MYA . . . I 2 12.911 -107.952 58.567 1 28.53 ? C6 MYA 602 B 1 
HETATM 8 C C7 MYA . . . I 2 13.365 -106.495 58.456 1 27.98 ? C7 MYA 602 B 1 
HETATM 9 N N8 MYA . . . I 2 14.209 -106.461 57.274 1 27.61 ? N8 MYA 602 B 1 
HETATM 10 C C9 MYA . . . I 2 15.315 -105.768 57.037 1 27.26 ? C9 MYA 602 B 1 
HETATM 11 O O9 MYA . . . I 2 15.799 -104.981 57.836 1 27.05 ? O9 MYA 602 B 1 
HETATM 12 C C10 MYA . . . I 2 15.917 -106.032 55.676 1 27.4 ? C10 MYA 602 B 1 
HETATM 13 O O10 MYA . . . I 2 15.773 -104.882 54.835 1 27.32 ? O10 MYA 602 B 1 
HETATM 14 C C11 MYA . . . I 2 17.365 -106.568 55.716 1 27.65 ? C11 MYA 602 B 1 
HETATM 15 C C12 MYA . . . I 2 18.002 -106.48 54.325 1 28.04 ? C12 MYA 602 B 1 
HETATM 16 C C13 MYA . . . I 2 17.314 -108.04 56.104 1 27.7 ? C13 MYA 602 B 1 
HETATM 17 C C14 MYA . . . I 2 18.274 -105.823 56.693 1 27.34 ? C14 MYA 602 B 1 
HETATM 18 N N1A MYA . . . I 2 19.776 -112.793 55.636 1 22.47 ? N1A MYA 602 B 1 
HETATM 19 O O1A MYA . . . I 2 22.507 -103.94 53.44 1 29.56 ? O1A MYA 602 B 1 
HETATM 20 P P1A MYA . . . I 2 21.823 -104.47 52.201 1 29.44 ? P1A MYA 602 B 1 
HETATM 21 C C1X MYA . . . I 2 22.183 -109.846 52.134 1 24.35 ? C1X MYA 602 B 1 
HETATM 22 C C2A MYA . . . I 2 21.021 -112.925 55.15 1 22.62 ? C2A MYA 602 B 1 
HETATM 23 O O2A MYA . . . I 2 21.437 -103.515 51.1 1 29.59 ? O2A MYA 602 B 1 
HETATM 24 P P2A MYA . . . I 2 19.031 -104.704 52.623 1 28.98 ? P2A MYA 602 B 1 
HETATM 25 C C2M MYA . . . I 2 17.492 -112.712 60.475 1 25.57 ? C2M MYA 602 B 1 
HETATM 26 O O2M MYA . . . I 2 16.931 -112.433 61.521 1 25.6 ? O2M MYA 602 B 1 
HETATM 27 C C2X MYA . . . I 2 21.976 -110.005 50.638 1 25.58 ? C2X MYA 602 B 1 
HETATM 28 O O2X MYA . . . I 2 22.261 -111.34 50.207 1 25.33 ? O2X MYA 602 B 1 
HETATM 29 N N3A MYA . . . I 2 21.496 -112.064 54.235 1 22.42 ? N3A MYA 602 B 1 
HETATM 30 O O3A MYA . . . I 2 20.524 -105.32 52.653 1 29.38 ? O3A MYA 602 B 1 
HETATM 31 C C3M MYA . . . I 2 18.991 -112.895 60.479 1 25.05 ? C3M MYA 602 B 1 
HETATM 32 C C3X MYA . . . I 2 22.923 -108.978 50.036 1 27 ? C3X MYA 602 B 1 
HETATM 33 O O3X MYA . . . I 2 24.23 -109.516 49.821 1 29.17 ? O3X MYA 602 B 1 
HETATM 34 P P3X MYA . . . I 2 24.682 -110.338 48.505 1 30.67 ? P3X MYA 602 B 1 
HETATM 35 C C4A MYA . . . I 2 20.721 -111.041 53.78 1 22.93 ? C4A MYA 602 B 1 
HETATM 36 O O4A MYA . . . I 2 18.247 -105.385 51.523 1 28.75 ? O4A MYA 602 B 1 
HETATM 37 C C4M MYA . . . I 2 19.476 -113.524 59.179 1 24.65 ? C4M MYA 602 B 1 
HETATM 38 C C4X MYA . . . I 2 23.066 -107.916 51.108 1 26.72 ? C4X MYA 602 B 1 
HETATM 39 O O4X MYA . . . I 2 22.623 -108.502 52.337 1 25.28 ? O4X MYA 602 B 1 
HETATM 40 C C5A MYA . . . I 2 19.433 -110.889 54.272 1 22.53 ? C5A MYA 602 B 1 
HETATM 41 O O5A MYA . . . I 2 19.143 -103.199 52.643 1 28.88 ? O5A MYA 602 B 1 
HETATM 42 C C5M MYA . . . I 2 20.843 -112.969 58.807 1 24.21 ? C5M MYA 602 B 1 
HETATM 43 C C5X MYA . . . I 2 22.252 -106.666 50.781 1 27.73 ? C5X MYA 602 B 1 
HETATM 44 O O5X MYA . . . I 2 22.785 -105.583 51.543 1 28.83 ? O5X MYA 602 B 1 
HETATM 45 C C6A MYA . . . I 2 18.967 -111.791 55.221 1 22.18 ? C6A MYA 602 B 1 
HETATM 46 N N6A MYA . . . I 2 17.717 -111.674 55.722 1 22.17 ? N6A MYA 602 B 1 
HETATM 47 O O6A MYA . . . I 2 18.436 -105.146 54.054 1 28.43 ? O6A MYA 602 B 1 
HETATM 48 C C6M MYA . . . I 2 21.906 -114.055 58.913 1 23.8 ? C6M MYA 602 B 1 
HETATM 49 N N7A MYA . . . I 2 18.893 -109.812 53.666 1 22.86 ? N7A MYA 602 B 1 
HETATM 50 O O7A MYA . . . I 2 25.515 -109.365 47.699 1 31 ? O7A MYA 602 B 1 
HETATM 51 C C7M MYA . . . I 2 23.28 -113.429 59.083 1 22.88 ? C7M MYA 602 B 1 
HETATM 52 C C8A MYA . . . I 2 19.821 -109.308 52.821 1 22.68 ? C8A MYA 602 B 1 
HETATM 53 O O8A MYA . . . I 2 23.39 -110.749 47.832 1 31 ? O8A MYA 602 B 1 
HETATM 54 C C8M MYA . . . I 2 24.356 -114.402 58.631 1 22.26 ? C8M MYA 602 B 1 
HETATM 55 N N9A MYA . . . I 2 20.929 -110.062 52.89 1 23.17 ? N9A MYA 602 B 1 
HETATM 56 O O9A MYA . . . I 2 25.483 -111.49 49.069 1 30.86 ? O9A MYA 602 B 1 
HETATM 57 C C9M MYA . . . I 2 25.517 -114.381 59.618 1 21.64 ? C9M MYA 602 B 1 
HETATM 58 C CAM MYA . . . I 2 25.786 -115.788 60.182 1 20.71 ? CAM MYA 602 B 1 
HETATM 59 C CBM MYA . . . I 2 27.266 -115.906 60.533 1 19.8 ? CBM MYA 602 B 1 
HETATM 60 C CCM MYA . . . I 2 27.526 -115.767 62.031 1 18.7 ? CCM MYA 602 B 1 
HETATM 61 C CDM MYA . . . I 2 28.993 -116.027 62.338 1 17.82 ? CDM MYA 602 B 1 
HETATM 62 C CEM MYA . . . I 2 29.171 -117.268 63.206 1 16.94 ? CEM MYA 602 B 1 
HETATM 63 C CFM MYA . . . I 2 30.529 -117.891 62.95 1 16.72 ? CFM MYA 602 B 1 
#
_model_server_stats.io_time_ms              64 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    33 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           63 
#