data_2P6F # _model_server_result.job_id 3-Hltdin2EK4yAQGQhUsFA _model_server_result.datetime_utc '2024-10-18 23:27:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2p6f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":605}' # _entry.id 2P6F # _exptl.entry_id 2P6F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 977.89 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TETRADECANOYL-COA _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.46 _cell.angle_gamma 90 _cell.entry_id 2P6F _cell.length_a 188.76 _cell.length_b 151.492 _cell.length_c 133.939 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2P6F _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,H 1 1 B,I,J 2 1 C,K,L 3 1 D,M,N 4 1 E,O,P 5 1 F,Q,R 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 I N N ? 2 K N N ? 2 M N N ? 2 O N N ? 2 Q N N # _chem_comp.formula 'C35 H62 N7 O17 P3 S' _chem_comp.formula_weight 977.89 _chem_comp.id MYA _chem_comp.mon_nstd_flag . _chem_comp.name TETRADECANOYL-COA _chem_comp.type non-polymer _chem_comp.pdbx_synonyms MYRISTOYL-COA # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2M S1 MYA sing 274 n n S1 C2 MYA sing 275 n n C2 C3 MYA sing 276 n n C2 H2 MYA sing 277 n n C2 H2A MYA sing 278 n n C3 N4 MYA sing 279 n n C3 H3 MYA sing 280 n n C3 H3A MYA sing 281 n n N4 C5 MYA sing 282 n n N4 HN4 MYA sing 283 n n O5 C5 MYA doub 284 n n C5 C6 MYA sing 285 n n C6 C7 MYA sing 286 n n C6 H6 MYA sing 287 n n C6 H6A MYA sing 288 n n N8 C7 MYA sing 289 n n C7 H7 MYA sing 290 n n C7 H7A MYA sing 291 n n C9 N8 MYA sing 292 n n N8 HN8 MYA sing 293 n n C10 C9 MYA sing 294 n n C9 O9 MYA doub 295 n n C11 C10 MYA sing 296 n n O10 C10 MYA sing 297 n n C10 H10 MYA sing 298 n n O10 HO10 MYA sing 299 n n C12 C11 MYA sing 300 n n C13 C11 MYA sing 301 n n C11 C14 MYA sing 302 n n C12 O6A MYA sing 303 n n C12 H12 MYA sing 304 n n C12 H12A MYA sing 305 n n C13 H13 MYA sing 306 n n C13 H13A MYA sing 307 n n C13 H13B MYA sing 308 n n C14 H14 MYA sing 309 n n C14 H14A MYA sing 310 n n C14 H14B MYA sing 311 n n C2A N1A MYA doub 312 n y N1A C6A MYA sing 313 n y P1A O1A MYA sing 314 n n O1A HO1A MYA sing 315 n n O5X P1A MYA sing 316 n n O2A P1A MYA doub 317 n n P1A O3A MYA sing 318 n n C2X C1X MYA sing 319 n n C1X O4X MYA sing 320 n n C1X N9A MYA sing 321 n n C1X H1X MYA sing 322 n n N3A C2A MYA sing 323 n y C2A H2AA MYA sing 324 n n O3A P2A MYA sing 325 n n O6A P2A MYA sing 326 n n P2A O4A MYA doub 327 n n P2A O5A MYA sing 328 n n C3M C2M MYA sing 329 n n C2M O2M MYA doub 330 n n O2X C2X MYA sing 331 n n C3X C2X MYA sing 332 n n C2X H2X MYA sing 333 n n O2X HO2X MYA sing 334 n n N3A C4A MYA doub 335 n y C4M C3M MYA sing 336 n n C3M H3M MYA sing 337 n n C3M H3MA MYA sing 338 n n O3X C3X MYA sing 339 n n C3X C4X MYA sing 340 n n C3X H3X MYA sing 341 n n P3X O3X MYA sing 342 n n O9A P3X MYA doub 343 n n O8A P3X MYA sing 344 n n P3X O7A MYA sing 345 n n C4A N9A MYA sing 346 n y C4A C5A MYA sing 347 n y C5M C4M MYA sing 348 n n C4M H4M MYA sing 349 n n C4M H4MA MYA sing 350 n n C4X O4X MYA sing 351 n n C4X C5X MYA sing 352 n n C4X H4X MYA sing 353 n n C5A C6A MYA doub 354 n y C5A N7A MYA sing 355 n y O5A HO5A MYA sing 356 n n C6M C5M MYA sing 357 n n C5M H5M MYA sing 358 n n C5M H5MA MYA sing 359 n n C5X O5X MYA sing 360 n n C5X H5X MYA sing 361 n n C5X H5XA MYA sing 362 n n C6A N6A MYA sing 363 n n N6A HN6A MYA sing 364 n n N6A HN6B MYA sing 365 n n C7M C6M MYA sing 366 n n C6M H6M MYA sing 367 n n C6M H6MA MYA sing 368 n n C8A N7A MYA doub 369 n y O7A HO7A MYA sing 370 n n C8M C7M MYA sing 371 n n C7M H7M MYA sing 372 n n C7M H7MA MYA sing 373 n n N9A C8A MYA sing 374 n y C8A H8A MYA sing 375 n n O8A HO8A MYA sing 376 n n C9M C8M MYA sing 377 n n C8M H8M MYA sing 378 n n C8M H8MA MYA sing 379 n n CAM C9M MYA sing 380 n n C9M H9M MYA sing 381 n n C9M H9MA MYA sing 382 n n CAM CBM MYA sing 383 n n CAM HAM MYA sing 384 n n CAM HAMA MYA sing 385 n n CCM CBM MYA sing 386 n n CBM HBM MYA sing 387 n n CBM HBMA MYA sing 388 n n CDM CCM MYA sing 389 n n CCM HCM MYA sing 390 n n CCM HCMA MYA sing 391 n n CEM CDM MYA sing 392 n n CDM HDM MYA sing 393 n n CDM HDMA MYA sing 394 n n CFM CEM MYA sing 395 n n CEM HEM MYA sing 396 n n CEM HEMA MYA sing 397 n n CFM HFM MYA sing 398 n n CFM HFMA MYA sing 399 n n CFM HFMB MYA sing 400 n n # _atom_sites.entry_id 2P6F _atom_sites.fract_transf_matrix[1][1] 0.005298 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001666 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006601 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007827 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 MYA A 1 601 601 MYA MYA . H 3 GN8 A 1 701 701 GN8 GN8 . I 2 MYA B 1 602 602 MYA MYA . J 3 GN8 B 1 702 702 GN8 GN8 . K 2 MYA C 1 603 603 MYA MYA . L 3 GN8 C 1 703 703 GN8 GN8 . M 2 MYA D 1 604 604 MYA MYA . N 3 GN8 D 1 704 704 GN8 GN8 . O 2 MYA E 1 605 605 MYA MYA . P 3 GN8 E 1 705 705 GN8 GN8 . Q 2 MYA F 1 606 606 MYA MYA . R 3 GN8 F 1 706 706 GN8 GN8 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 MYA . . . O 2 36.777 -31.004 -4.678 1 21.25 ? S1 MYA 605 E 1 HETATM 2 C C2 MYA . . . O 2 35.774 -29.647 -4.169 1 22.26 ? C2 MYA 605 E 1 HETATM 3 C C3 MYA . . . O 2 36.183 -28.404 -4.951 1 22.98 ? C3 MYA 605 E 1 HETATM 4 N N4 MYA . . . O 2 34.968 -27.61 -5.025 1 23.58 ? N4 MYA 605 E 1 HETATM 5 C C5 MYA . . . O 2 34.183 -27.426 -6.082 1 24.12 ? C5 MYA 605 E 1 HETATM 6 O O5 MYA . . . O 2 34.402 -27.916 -7.18 1 24.46 ? O5 MYA 605 E 1 HETATM 7 C C6 MYA . . . O 2 32.975 -26.547 -5.866 1 24.73 ? C6 MYA 605 E 1 HETATM 8 C C7 MYA . . . O 2 33.427 -25.102 -5.675 1 25.47 ? C7 MYA 605 E 1 HETATM 9 N N8 MYA . . . O 2 34.304 -24.822 -6.805 1 26.03 ? N8 MYA 605 E 1 HETATM 10 C C9 MYA . . . O 2 35.308 -23.953 -6.856 1 26.48 ? C9 MYA 605 E 1 HETATM 11 O O9 MYA . . . O 2 35.603 -23.24 -5.906 1 26.27 ? O9 MYA 605 E 1 HETATM 12 C C10 MYA . . . O 2 36.046 -23.874 -8.176 1 27.05 ? C10 MYA 605 E 1 HETATM 13 O O10 MYA . . . O 2 36.124 -22.497 -8.565 1 27.36 ? O10 MYA 605 E 1 HETATM 14 C C11 MYA . . . O 2 37.436 -24.547 -8.206 1 27.48 ? C11 MYA 605 E 1 HETATM 15 C C12 MYA . . . O 2 38.06 -24.395 -9.598 1 28.1 ? C12 MYA 605 E 1 HETATM 16 C C13 MYA . . . O 2 37.292 -26.041 -7.944 1 27.54 ? C13 MYA 605 E 1 HETATM 17 C C14 MYA . . . O 2 38.4 -23.953 -7.18 1 27.17 ? C14 MYA 605 E 1 HETATM 18 N N1A MYA . . . O 2 39.863 -30.934 -8.083 1 25.23 ? N1A MYA 605 E 1 HETATM 19 O O1A MYA . . . O 2 42.531 -21.92 -10.447 1 29.88 ? O1A MYA 605 E 1 HETATM 20 P P1A MYA . . . O 2 41.97 -22.47 -11.738 1 29.84 ? P1A MYA 605 E 1 HETATM 21 C C1X MYA . . . O 2 42.065 -27.848 -11.611 1 26.76 ? C1X MYA 605 E 1 HETATM 22 C C2A MYA . . . O 2 41.124 -30.945 -8.547 1 25.52 ? C2A MYA 605 E 1 HETATM 23 O O2A MYA . . . O 2 41.728 -21.532 -12.893 1 29.63 ? O2A MYA 605 E 1 HETATM 24 P P2A MYA . . . O 2 39.191 -22.558 -11.182 1 29.84 ? P2A MYA 605 E 1 HETATM 25 C C2M MYA . . . O 2 37.982 -30.981 -3.521 1 21.25 ? C2M MYA 605 E 1 HETATM 26 O O2M MYA . . . O 2 38.015 -30.119 -2.653 1 20.89 ? O2M MYA 605 E 1 HETATM 27 C C2X MYA . . . O 2 41.994 -28.15 -13.097 1 27.69 ? C2X MYA 605 E 1 HETATM 28 O O2X MYA . . . O 2 42.453 -29.477 -13.346 1 27.81 ? O2X MYA 605 E 1 HETATM 29 N N3A MYA . . . O 2 41.532 -30.067 -9.475 1 25.33 ? N3A MYA 605 E 1 HETATM 30 O O3A MYA . . . O 2 40.615 -23.284 -11.395 1 29.94 ? O3A MYA 605 E 1 HETATM 31 C C3M MYA . . . O 2 39.04 -32.058 -3.558 1 20.95 ? C3M MYA 605 E 1 HETATM 32 C C3X MYA . . . O 2 42.897 -27.105 -13.743 1 28.72 ? C3X MYA 605 E 1 HETATM 33 O O3X MYA . . . O 2 44.207 -27.62 -14.031 1 30.47 ? O3X MYA 605 E 1 HETATM 34 P P3X MYA . . . O 2 44.637 -28.45 -15.359 1 31.81 ? P3X MYA 605 E 1 HETATM 35 C C4A MYA . . . O 2 40.671 -29.137 -9.964 1 25.54 ? C4A MYA 605 E 1 HETATM 36 O O4A MYA . . . O 2 38.235 -23.077 -12.235 1 29.7 ? O4A MYA 605 E 1 HETATM 37 C C4M MYA . . . O 2 40.434 -31.444 -3.537 1 20.64 ? C4M MYA 605 E 1 HETATM 38 C C4X MYA . . . O 2 43.039 -26.012 -12.694 1 28.35 ? C4X MYA 605 E 1 HETATM 39 O O4X MYA . . . O 2 42.362 -26.455 -11.516 1 27.53 ? O4X MYA 605 E 1 HETATM 40 C C5A MYA . . . O 2 39.365 -29.103 -9.498 1 25.26 ? C5A MYA 605 E 1 HETATM 41 O O5A MYA . . . O 2 39.434 -21.068 -11.057 1 29.53 ? O5A MYA 605 E 1 HETATM 42 C C5M MYA . . . O 2 40.944 -31.1 -4.932 1 20.61 ? C5M MYA 605 E 1 HETATM 43 C C5X MYA . . . O 2 42.457 -24.676 -13.139 1 28.95 ? C5X MYA 605 E 1 HETATM 44 O O5X MYA . . . O 2 42.935 -23.651 -12.263 1 29.56 ? O5X MYA 605 E 1 HETATM 45 C C6A MYA . . . O 2 38.968 -30.028 -8.538 1 25.28 ? C6A MYA 605 E 1 HETATM 46 N N6A MYA . . . O 2 37.701 -30.028 -8.06 1 25.23 ? N6A MYA 605 E 1 HETATM 47 O O6A MYA . . . O 2 38.724 -23.133 -9.745 1 29.07 ? O6A MYA 605 E 1 HETATM 48 C C6M MYA . . . O 2 41.788 -32.229 -5.519 1 20.28 ? C6M MYA 605 E 1 HETATM 49 N N7A MYA . . . O 2 38.732 -28.102 -10.138 1 25.4 ? N7A MYA 605 E 1 HETATM 50 O O7A MYA . . . O 2 45.47 -27.492 -16.18 1 31.54 ? O7A MYA 605 E 1 HETATM 51 C C7M MYA . . . O 2 43.286 -31.939 -5.491 1 19.69 ? C7M MYA 605 E 1 HETATM 52 C C8A MYA . . . O 2 39.628 -27.53 -10.976 1 25.66 ? C8A MYA 605 E 1 HETATM 53 O O8A MYA . . . O 2 43.352 -28.88 -16.039 1 32.02 ? O8A MYA 605 E 1 HETATM 54 C C8M MYA . . . O 2 43.959 -32.844 -4.463 1 18.82 ? C8M MYA 605 E 1 HETATM 55 N N9A MYA . . . O 2 40.808 -28.167 -10.874 1 26.1 ? N9A MYA 605 E 1 HETATM 56 O O9A MYA . . . O 2 45.439 -29.599 -14.797 1 31.86 ? O9A MYA 605 E 1 HETATM 57 C C9M MYA . . . O 2 45.472 -32.858 -4.622 1 18.02 ? C9M MYA 605 E 1 HETATM 58 C CAM MYA . . . O 2 46.116 -33.696 -3.522 1 16.97 ? CAM MYA 605 E 1 HETATM 59 C CBM MYA . . . O 2 47.254 -32.93 -2.861 1 16.04 ? CBM MYA 605 E 1 HETATM 60 C CCM MYA . . . O 2 47.564 -33.499 -1.482 1 15.51 ? CCM MYA 605 E 1 HETATM 61 C CDM MYA . . . O 2 48.868 -34.288 -1.479 1 14.79 ? CDM MYA 605 E 1 HETATM 62 C CEM MYA . . . O 2 49.252 -34.719 -0.062 1 13.54 ? CEM MYA 605 E 1 HETATM 63 C CFM MYA . . . O 2 50.263 -35.864 -0.166 1 13.87 ? CFM MYA 605 E 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 63 #