data_2P71 # _model_server_result.job_id a8lApQs2seJ8PSupwd0C5A _model_server_result.datetime_utc '2025-01-11 09:53:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2p71 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 2P71 # _exptl.entry_id 2P71 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 352.338 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-IODOHEXADECANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2P71 _cell.length_a 83.79 _cell.length_b 83.79 _cell.length_c 34.88 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2P71 _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 19 A CYS 19 1_555 A SG CYS 54 A CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? disulf ? disulf2 A SG CYS 50 A CYS 50 1_555 A SG CYS 108 A CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? disulf ? disulf3 A SG CYS 97 A CYS 97 1_555 A SG CYS 117 A CYS 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? # _chem_comp.formula 'C16 H33 I' _chem_comp.formula_weight 352.338 _chem_comp.id IHD _chem_comp.mon_nstd_flag . _chem_comp.name 1-IODOHEXADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C16 IHD sing 152 n n C17 H171 IHD sing 153 n n C17 H172 IHD sing 154 n n C17 H173 IHD sing 155 n n C16 C15 IHD sing 156 n n C16 H161 IHD sing 157 n n C16 H162 IHD sing 158 n n C15 C14 IHD sing 159 n n C15 H151 IHD sing 160 n n C15 H152 IHD sing 161 n n C14 C13 IHD sing 162 n n C14 H141 IHD sing 163 n n C14 H142 IHD sing 164 n n C13 C12 IHD sing 165 n n C13 H131 IHD sing 166 n n C13 H132 IHD sing 167 n n C12 C11 IHD sing 168 n n C12 H121 IHD sing 169 n n C12 H122 IHD sing 170 n n C11 C10 IHD sing 171 n n C11 H111 IHD sing 172 n n C11 H112 IHD sing 173 n n C10 C9 IHD sing 174 n n C10 H101 IHD sing 175 n n C10 H102 IHD sing 176 n n C9 C8 IHD sing 177 n n C9 H91 IHD sing 178 n n C9 H92 IHD sing 179 n n C8 C7 IHD sing 180 n n C8 H81 IHD sing 181 n n C8 H82 IHD sing 182 n n C7 C6 IHD sing 183 n n C7 H71 IHD sing 184 n n C7 H72 IHD sing 185 n n C6 C5 IHD sing 186 n n C6 H61 IHD sing 187 n n C6 H62 IHD sing 188 n n C5 C4 IHD sing 189 n n C5 H51 IHD sing 190 n n C5 H52 IHD sing 191 n n C4 C3 IHD sing 192 n n C4 H41 IHD sing 193 n n C4 H42 IHD sing 194 n n C3 C2 IHD sing 195 n n C3 H31 IHD sing 196 n n C3 H32 IHD sing 197 n n C2 I1 IHD sing 198 n n C2 H21 IHD sing 199 n n C2 H22 IHD sing 200 n n # _atom_sites.entry_id 2P71 _atom_sites.fract_transf_matrix[1][1] 0.011935 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011935 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02867 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IHD A 1 300 300 IHD IHD . C 3 HOH A 1 301 1 HOH HOH . C 3 HOH A 2 302 2 HOH HOH . C 3 HOH A 3 303 3 HOH HOH . C 3 HOH A 4 304 4 HOH HOH . C 3 HOH A 5 305 5 HOH HOH . C 3 HOH A 6 306 6 HOH HOH . C 3 HOH A 7 307 7 HOH HOH . C 3 HOH A 8 308 8 HOH HOH . C 3 HOH A 9 309 9 HOH HOH . C 3 HOH A 10 310 10 HOH HOH . C 3 HOH A 11 311 11 HOH HOH . C 3 HOH A 12 312 12 HOH HOH . C 3 HOH A 13 313 13 HOH HOH . C 3 HOH A 14 314 14 HOH HOH . C 3 HOH A 15 315 15 HOH HOH . C 3 HOH A 16 316 16 HOH HOH . C 3 HOH A 17 317 17 HOH HOH . C 3 HOH A 18 318 18 HOH HOH . C 3 HOH A 19 319 19 HOH HOH . C 3 HOH A 20 320 20 HOH HOH . C 3 HOH A 21 321 21 HOH HOH . C 3 HOH A 22 322 22 HOH HOH . C 3 HOH A 23 323 23 HOH HOH . C 3 HOH A 24 324 24 HOH HOH . C 3 HOH A 25 325 25 HOH HOH . C 3 HOH A 26 326 26 HOH HOH . C 3 HOH A 27 327 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C17 IHD . . . B 2 60.585 48.064 -3.609 1 39.67 ? C17 IHD 300 A 1 HETATM 2 C C16 IHD . . . B 2 61.93 47.47 -3.329 1 42.39 ? C16 IHD 300 A 1 HETATM 3 C C15 IHD . . . B 2 62.063 45.929 -3.199 1 44.19 ? C15 IHD 300 A 1 HETATM 4 C C14 IHD . . . B 2 63.598 45.729 -3.151 1 40.19 ? C14 IHD 300 A 1 HETATM 5 C C13 IHD . . . B 2 64.314 44.402 -2.849 1 40.31 ? C13 IHD 300 A 1 HETATM 6 C C12 IHD . . . B 2 63.642 43.08 -3.058 1 42.02 ? C12 IHD 300 A 1 HETATM 7 C C11 IHD . . . B 2 64.322 41.901 -2.363 1 41.09 ? C11 IHD 300 A 1 HETATM 8 C C10 IHD . . . B 2 63.505 40.959 -1.436 1 41.28 ? C10 IHD 300 A 1 HETATM 9 C C9 IHD . . . B 2 62.685 41.743 -0.392 1 45.37 ? C9 IHD 300 A 1 HETATM 10 C C8 IHD . . . B 2 61.335 42.238 -1.033 1 47.03 ? C8 IHD 300 A 1 HETATM 11 C C7 IHD . . . B 2 60.069 41.535 -0.575 1 41.16 ? C7 IHD 300 A 1 HETATM 12 C C6 IHD . . . B 2 59.264 42.464 0.346 1 46.58 ? C6 IHD 300 A 1 HETATM 13 C C5 IHD . . . B 2 58.492 41.577 1.317 1 43.6 ? C5 IHD 300 A 1 HETATM 14 C C4 IHD . . . B 2 57.763 42.182 2.531 1 47.3 ? C4 IHD 300 A 1 HETATM 15 C C3 IHD . . . B 2 57.411 43.684 2.424 1 49.44 ? C3 IHD 300 A 1 HETATM 16 C C2 IHD . . . B 2 58.429 44.535 3.168 1 50.09 ? C2 IHD 300 A 1 HETATM 17 I I1 IHD . . . B 2 59.354 45.767 1.614 1 61.48 ? I1 IHD 300 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #