data_2PBJ # _model_server_result.job_id -vRDZbcpinEmC2IOUYn2jw _model_server_result.datetime_utc '2024-11-05 00:27:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pbj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":477}' # _entry.id 2PBJ # _exptl.entry_id 2PBJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111 _cell.angle_gamma 90 _cell.entry_id 2PBJ _cell.length_a 127 _cell.length_b 122.49 _cell.length_c 110.97 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PBJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,Q,R 1 1 C,D,K,L,M,N,O,P,S,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 J N N ? 4 M N N ? 4 P N N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 129 n n N1 HN11 GSH sing 130 n n N1 HN12 GSH sing 131 n n CA1 C1 GSH sing 132 n n CA1 CB1 GSH sing 133 n n CA1 HA1 GSH sing 134 n n C1 O11 GSH doub 135 n n C1 O12 GSH sing 136 n n O12 H12 GSH sing 137 n n CB1 CG1 GSH sing 138 n n CB1 HB12 GSH sing 139 n n CB1 HB13 GSH sing 140 n n CG1 CD1 GSH sing 141 n n CG1 HG12 GSH sing 142 n n CG1 HG13 GSH sing 143 n n CD1 OE1 GSH doub 144 n n CD1 N2 GSH sing 145 n n N2 CA2 GSH sing 146 n n N2 HN2 GSH sing 147 n n CA2 C2 GSH sing 148 n n CA2 CB2 GSH sing 149 n n CA2 HA2 GSH sing 150 n n C2 O2 GSH doub 151 n n C2 N3 GSH sing 152 n n CB2 SG2 GSH sing 153 n n CB2 HB22 GSH sing 154 n n CB2 HB23 GSH sing 155 n n SG2 HSG GSH sing 156 n n N3 CA3 GSH sing 157 n n N3 HN3 GSH sing 158 n n CA3 C3 GSH sing 159 n n CA3 HA31 GSH sing 160 n n CA3 HA32 GSH sing 161 n n C3 O31 GSH doub 162 n n C3 O32 GSH sing 163 n n O32 H32 GSH sing 164 n n # _atom_sites.entry_id 2PBJ _atom_sites.fract_transf_matrix[1][1] 0.007874 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003023 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008164 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009653 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CL A 1 475 475 CL CL . F 3 HEM A 1 476 476 HEM HEM . G 4 GSH A 1 477 477 GSH GSH . H 2 CL B 1 475 475 CL CL . I 3 HEM B 1 476 476 HEM HEM . J 4 GSH B 1 477 477 GSH GSH . K 2 CL C 1 475 475 CL CL . L 3 HEM C 1 476 476 HEM HEM . M 4 GSH C 1 477 477 GSH GSH . N 2 CL D 1 475 475 CL CL . O 3 HEM D 1 476 476 HEM HEM . P 4 GSH D 1 477 477 GSH GSH . Q 5 HOH A 1 478 1 HOH HOH . Q 5 HOH A 2 479 8 HOH HOH . Q 5 HOH A 3 480 9 HOH HOH . Q 5 HOH A 4 481 16 HOH HOH . Q 5 HOH A 5 482 18 HOH HOH . Q 5 HOH A 6 483 25 HOH HOH . Q 5 HOH A 7 484 29 HOH HOH . Q 5 HOH A 8 485 30 HOH HOH . Q 5 HOH A 9 486 33 HOH HOH . Q 5 HOH A 10 487 35 HOH HOH . Q 5 HOH A 11 488 37 HOH HOH . Q 5 HOH A 12 489 38 HOH HOH . Q 5 HOH A 13 490 40 HOH HOH . Q 5 HOH A 14 491 42 HOH HOH . Q 5 HOH A 15 492 46 HOH HOH . Q 5 HOH A 16 493 49 HOH HOH . Q 5 HOH A 17 494 53 HOH HOH . Q 5 HOH A 18 495 59 HOH HOH . Q 5 HOH A 19 496 63 HOH HOH . Q 5 HOH A 20 497 66 HOH HOH . Q 5 HOH A 21 498 69 HOH HOH . Q 5 HOH A 22 499 71 HOH HOH . Q 5 HOH A 23 500 72 HOH HOH . Q 5 HOH A 24 501 73 HOH HOH . Q 5 HOH A 25 502 86 HOH HOH . Q 5 HOH A 26 503 90 HOH HOH . Q 5 HOH A 27 504 95 HOH HOH . Q 5 HOH A 28 505 97 HOH HOH . Q 5 HOH A 29 506 103 HOH HOH . Q 5 HOH A 30 507 104 HOH HOH . Q 5 HOH A 31 508 105 HOH HOH . Q 5 HOH A 32 509 107 HOH HOH . Q 5 HOH A 33 510 112 HOH HOH . Q 5 HOH A 34 511 115 HOH HOH . Q 5 HOH A 35 512 118 HOH HOH . Q 5 HOH A 36 513 123 HOH HOH . Q 5 HOH A 37 514 124 HOH HOH . Q 5 HOH A 38 515 127 HOH HOH . Q 5 HOH A 39 516 128 HOH HOH . Q 5 HOH A 40 517 129 HOH HOH . Q 5 HOH A 41 518 133 HOH HOH . Q 5 HOH A 42 519 134 HOH HOH . Q 5 HOH A 43 520 139 HOH HOH . Q 5 HOH A 44 521 140 HOH HOH . Q 5 HOH A 45 522 142 HOH HOH . Q 5 HOH A 46 523 147 HOH HOH . Q 5 HOH A 47 524 152 HOH HOH . Q 5 HOH A 48 525 154 HOH HOH . Q 5 HOH A 49 526 156 HOH HOH . Q 5 HOH A 50 527 160 HOH HOH . Q 5 HOH A 51 528 161 HOH HOH . Q 5 HOH A 52 529 164 HOH HOH . R 5 HOH B 1 478 2 HOH HOH . R 5 HOH B 2 479 4 HOH HOH . R 5 HOH B 3 480 10 HOH HOH . R 5 HOH B 4 481 11 HOH HOH . R 5 HOH B 5 482 12 HOH HOH . R 5 HOH B 6 483 19 HOH HOH . R 5 HOH B 7 484 20 HOH HOH . R 5 HOH B 8 485 21 HOH HOH . R 5 HOH B 9 486 22 HOH HOH . R 5 HOH B 10 487 28 HOH HOH . R 5 HOH B 11 488 34 HOH HOH . R 5 HOH B 12 489 39 HOH HOH . R 5 HOH B 13 490 41 HOH HOH . R 5 HOH B 14 491 43 HOH HOH . R 5 HOH B 15 492 44 HOH HOH . R 5 HOH B 16 493 45 HOH HOH . R 5 HOH B 17 494 47 HOH HOH . R 5 HOH B 18 495 52 HOH HOH . R 5 HOH B 19 496 57 HOH HOH . R 5 HOH B 20 497 58 HOH HOH . R 5 HOH B 21 498 61 HOH HOH . R 5 HOH B 22 499 68 HOH HOH . R 5 HOH B 23 500 70 HOH HOH . R 5 HOH B 24 501 76 HOH HOH . R 5 HOH B 25 502 83 HOH HOH . R 5 HOH B 26 503 84 HOH HOH . R 5 HOH B 27 504 88 HOH HOH . R 5 HOH B 28 505 96 HOH HOH . R 5 HOH B 29 506 100 HOH HOH . R 5 HOH B 30 507 109 HOH HOH . R 5 HOH B 31 508 114 HOH HOH . R 5 HOH B 32 509 120 HOH HOH . R 5 HOH B 33 510 135 HOH HOH . R 5 HOH B 34 511 138 HOH HOH . R 5 HOH B 35 512 143 HOH HOH . R 5 HOH B 36 513 151 HOH HOH . R 5 HOH B 37 514 155 HOH HOH . R 5 HOH B 38 515 158 HOH HOH . R 5 HOH B 39 516 163 HOH HOH . S 5 HOH C 1 478 3 HOH HOH . S 5 HOH C 2 479 5 HOH HOH . S 5 HOH C 3 480 7 HOH HOH . S 5 HOH C 4 481 13 HOH HOH . S 5 HOH C 5 482 14 HOH HOH . S 5 HOH C 6 483 15 HOH HOH . S 5 HOH C 7 484 17 HOH HOH . S 5 HOH C 8 485 23 HOH HOH . S 5 HOH C 9 486 24 HOH HOH . S 5 HOH C 10 487 31 HOH HOH . S 5 HOH C 11 488 32 HOH HOH . S 5 HOH C 12 489 36 HOH HOH . S 5 HOH C 13 490 48 HOH HOH . S 5 HOH C 14 491 50 HOH HOH . S 5 HOH C 15 492 60 HOH HOH . S 5 HOH C 16 493 64 HOH HOH . S 5 HOH C 17 494 65 HOH HOH . S 5 HOH C 18 495 67 HOH HOH . S 5 HOH C 19 496 74 HOH HOH . S 5 HOH C 20 497 78 HOH HOH . S 5 HOH C 21 498 91 HOH HOH . S 5 HOH C 22 499 94 HOH HOH . S 5 HOH C 23 500 99 HOH HOH . S 5 HOH C 24 501 113 HOH HOH . S 5 HOH C 25 502 116 HOH HOH . S 5 HOH C 26 503 119 HOH HOH . S 5 HOH C 27 504 121 HOH HOH . S 5 HOH C 28 505 125 HOH HOH . S 5 HOH C 29 506 126 HOH HOH . S 5 HOH C 30 507 130 HOH HOH . S 5 HOH C 31 508 131 HOH HOH . S 5 HOH C 32 509 137 HOH HOH . S 5 HOH C 33 510 141 HOH HOH . S 5 HOH C 34 511 146 HOH HOH . S 5 HOH C 35 512 150 HOH HOH . S 5 HOH C 36 513 153 HOH HOH . S 5 HOH C 37 514 157 HOH HOH . S 5 HOH C 38 515 159 HOH HOH . S 5 HOH C 39 516 166 HOH HOH . S 5 HOH C 40 517 167 HOH HOH . T 5 HOH D 1 478 6 HOH HOH . T 5 HOH D 2 479 26 HOH HOH . T 5 HOH D 3 480 27 HOH HOH . T 5 HOH D 4 481 51 HOH HOH . T 5 HOH D 5 482 54 HOH HOH . T 5 HOH D 6 483 55 HOH HOH . T 5 HOH D 7 484 56 HOH HOH . T 5 HOH D 8 485 62 HOH HOH . T 5 HOH D 9 486 75 HOH HOH . T 5 HOH D 10 487 77 HOH HOH . T 5 HOH D 11 488 79 HOH HOH . T 5 HOH D 12 489 80 HOH HOH . T 5 HOH D 13 490 81 HOH HOH . T 5 HOH D 14 491 82 HOH HOH . T 5 HOH D 15 492 85 HOH HOH . T 5 HOH D 16 493 87 HOH HOH . T 5 HOH D 17 494 89 HOH HOH . T 5 HOH D 18 495 92 HOH HOH . T 5 HOH D 19 496 93 HOH HOH . T 5 HOH D 20 497 98 HOH HOH . T 5 HOH D 21 498 101 HOH HOH . T 5 HOH D 22 499 102 HOH HOH . T 5 HOH D 23 500 106 HOH HOH . T 5 HOH D 24 501 108 HOH HOH . T 5 HOH D 25 502 110 HOH HOH . T 5 HOH D 26 503 111 HOH HOH . T 5 HOH D 27 504 117 HOH HOH . T 5 HOH D 28 505 122 HOH HOH . T 5 HOH D 29 506 132 HOH HOH . T 5 HOH D 30 507 136 HOH HOH . T 5 HOH D 31 508 144 HOH HOH . T 5 HOH D 32 509 145 HOH HOH . T 5 HOH D 33 510 148 HOH HOH . T 5 HOH D 34 511 149 HOH HOH . T 5 HOH D 35 512 162 HOH HOH . T 5 HOH D 36 513 165 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . G 4 -22.085 45.329 19.594 1 28.08 ? N1 GSH 477 A 1 HETATM 2 C CA1 GSH . . . G 4 -21.702 46.622 20.154 1 29.15 ? CA1 GSH 477 A 1 HETATM 3 C C1 GSH . . . G 4 -22.91 47.405 20.713 1 29.88 ? C1 GSH 477 A 1 HETATM 4 O O11 GSH . . . G 4 -24.043 47.024 20.416 1 30.6 ? O11 GSH 477 A 1 HETATM 5 O O12 GSH . . . G 4 -22.654 48.448 21.489 1 32.02 ? O12 GSH 477 A 1 HETATM 6 C CB1 GSH . . . G 4 -21.033 47.418 19.052 1 29.97 ? CB1 GSH 477 A 1 HETATM 7 C CG1 GSH . . . G 4 -19.771 48.156 19.55 1 34.1 ? CG1 GSH 477 A 1 HETATM 8 C CD1 GSH . . . G 4 -19.104 48.814 18.305 1 36.46 ? CD1 GSH 477 A 1 HETATM 9 O OE1 GSH . . . G 4 -18.887 48.151 17.286 1 37.27 ? OE1 GSH 477 A 1 HETATM 10 N N2 GSH . . . G 4 -18.792 50.125 18.468 1 36.92 ? N2 GSH 477 A 1 HETATM 11 C CA2 GSH . . . G 4 -17.867 50.807 17.558 1 37.62 ? CA2 GSH 477 A 1 HETATM 12 C C2 GSH . . . G 4 -16.604 51.217 18.341 1 40.36 ? C2 GSH 477 A 1 HETATM 13 O O2 GSH . . . G 4 -16.637 52.018 19.293 1 41.73 ? O2 GSH 477 A 1 HETATM 14 C CB2 GSH . . . G 4 -18.49 52.084 16.987 1 36.05 ? CB2 GSH 477 A 1 HETATM 15 S SG2 GSH . . . G 4 -19.755 51.765 15.707 1 36.54 ? SG2 GSH 477 A 1 HETATM 16 N N3 GSH . . . G 4 -15.447 50.651 17.93 1 41.9 ? N3 GSH 477 A 1 HETATM 17 C CA3 GSH . . . G 4 -14.427 50.162 18.876 1 44.63 ? CA3 GSH 477 A 1 HETATM 18 C C3 GSH . . . G 4 -13.787 48.885 18.334 1 45.71 ? C3 GSH 477 A 1 HETATM 19 O O31 GSH . . . G 4 -12.572 48.728 18.579 1 44.13 ? O31 GSH 477 A 1 HETATM 20 O O32 GSH . . . G 4 -14.51 48.065 17.693 1 46.19 ? O32 GSH 477 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #