data_2PBJ
#
_model_server_result.job_id            4sK4Amz2WWeT1jpdJ2EAIA 
_model_server_result.datetime_utc      '2024-11-05 00:33:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2pbj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":477}' 
#
_entry.id    2PBJ 
#
_exptl.entry_id    2PBJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              307.323 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLUTATHIONE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111 
_cell.angle_gamma         90 
_cell.entry_id            2PBJ 
_cell.length_a            127 
_cell.length_b            122.49 
_cell.length_c            110.97 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2PBJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,Q,R 1 1 
C,D,K,L,M,N,O,P,S,T 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 J N N 
? 4 M N N 
? 4 P N N 
#
_chem_comp.formula           'C10 H17 N3 O6 S' 
_chem_comp.formula_weight    307.323 
_chem_comp.id                GSH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLUTATHIONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 CA1 GSH sing 129 n n 
N1 HN11 GSH sing 130 n n 
N1 HN12 GSH sing 131 n n 
CA1 C1 GSH sing 132 n n 
CA1 CB1 GSH sing 133 n n 
CA1 HA1 GSH sing 134 n n 
C1 O11 GSH doub 135 n n 
C1 O12 GSH sing 136 n n 
O12 H12 GSH sing 137 n n 
CB1 CG1 GSH sing 138 n n 
CB1 HB12 GSH sing 139 n n 
CB1 HB13 GSH sing 140 n n 
CG1 CD1 GSH sing 141 n n 
CG1 HG12 GSH sing 142 n n 
CG1 HG13 GSH sing 143 n n 
CD1 OE1 GSH doub 144 n n 
CD1 N2 GSH sing 145 n n 
N2 CA2 GSH sing 146 n n 
N2 HN2 GSH sing 147 n n 
CA2 C2 GSH sing 148 n n 
CA2 CB2 GSH sing 149 n n 
CA2 HA2 GSH sing 150 n n 
C2 O2 GSH doub 151 n n 
C2 N3 GSH sing 152 n n 
CB2 SG2 GSH sing 153 n n 
CB2 HB22 GSH sing 154 n n 
CB2 HB23 GSH sing 155 n n 
SG2 HSG GSH sing 156 n n 
N3 CA3 GSH sing 157 n n 
N3 HN3 GSH sing 158 n n 
CA3 C3 GSH sing 159 n n 
CA3 HA31 GSH sing 160 n n 
CA3 HA32 GSH sing 161 n n 
C3 O31 GSH doub 162 n n 
C3 O32 GSH sing 163 n n 
O32 H32 GSH sing 164 n n 
#
_atom_sites.entry_id                     2PBJ 
_atom_sites.fract_transf_matrix[1][1]    0.007874 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003023 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008164 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009653 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CL A 1 475 475 CL CL . 
F 3 HEM A 1 476 476 HEM HEM . 
G 4 GSH A 1 477 477 GSH GSH . 
H 2 CL B 1 475 475 CL CL . 
I 3 HEM B 1 476 476 HEM HEM . 
J 4 GSH B 1 477 477 GSH GSH . 
K 2 CL C 1 475 475 CL CL . 
L 3 HEM C 1 476 476 HEM HEM . 
M 4 GSH C 1 477 477 GSH GSH . 
N 2 CL D 1 475 475 CL CL . 
O 3 HEM D 1 476 476 HEM HEM . 
P 4 GSH D 1 477 477 GSH GSH . 
Q 5 HOH A 1 478 1 HOH HOH . 
Q 5 HOH A 2 479 8 HOH HOH . 
Q 5 HOH A 3 480 9 HOH HOH . 
Q 5 HOH A 4 481 16 HOH HOH . 
Q 5 HOH A 5 482 18 HOH HOH . 
Q 5 HOH A 6 483 25 HOH HOH . 
Q 5 HOH A 7 484 29 HOH HOH . 
Q 5 HOH A 8 485 30 HOH HOH . 
Q 5 HOH A 9 486 33 HOH HOH . 
Q 5 HOH A 10 487 35 HOH HOH . 
Q 5 HOH A 11 488 37 HOH HOH . 
Q 5 HOH A 12 489 38 HOH HOH . 
Q 5 HOH A 13 490 40 HOH HOH . 
Q 5 HOH A 14 491 42 HOH HOH . 
Q 5 HOH A 15 492 46 HOH HOH . 
Q 5 HOH A 16 493 49 HOH HOH . 
Q 5 HOH A 17 494 53 HOH HOH . 
Q 5 HOH A 18 495 59 HOH HOH . 
Q 5 HOH A 19 496 63 HOH HOH . 
Q 5 HOH A 20 497 66 HOH HOH . 
Q 5 HOH A 21 498 69 HOH HOH . 
Q 5 HOH A 22 499 71 HOH HOH . 
Q 5 HOH A 23 500 72 HOH HOH . 
Q 5 HOH A 24 501 73 HOH HOH . 
Q 5 HOH A 25 502 86 HOH HOH . 
Q 5 HOH A 26 503 90 HOH HOH . 
Q 5 HOH A 27 504 95 HOH HOH . 
Q 5 HOH A 28 505 97 HOH HOH . 
Q 5 HOH A 29 506 103 HOH HOH . 
Q 5 HOH A 30 507 104 HOH HOH . 
Q 5 HOH A 31 508 105 HOH HOH . 
Q 5 HOH A 32 509 107 HOH HOH . 
Q 5 HOH A 33 510 112 HOH HOH . 
Q 5 HOH A 34 511 115 HOH HOH . 
Q 5 HOH A 35 512 118 HOH HOH . 
Q 5 HOH A 36 513 123 HOH HOH . 
Q 5 HOH A 37 514 124 HOH HOH . 
Q 5 HOH A 38 515 127 HOH HOH . 
Q 5 HOH A 39 516 128 HOH HOH . 
Q 5 HOH A 40 517 129 HOH HOH . 
Q 5 HOH A 41 518 133 HOH HOH . 
Q 5 HOH A 42 519 134 HOH HOH . 
Q 5 HOH A 43 520 139 HOH HOH . 
Q 5 HOH A 44 521 140 HOH HOH . 
Q 5 HOH A 45 522 142 HOH HOH . 
Q 5 HOH A 46 523 147 HOH HOH . 
Q 5 HOH A 47 524 152 HOH HOH . 
Q 5 HOH A 48 525 154 HOH HOH . 
Q 5 HOH A 49 526 156 HOH HOH . 
Q 5 HOH A 50 527 160 HOH HOH . 
Q 5 HOH A 51 528 161 HOH HOH . 
Q 5 HOH A 52 529 164 HOH HOH . 
R 5 HOH B 1 478 2 HOH HOH . 
R 5 HOH B 2 479 4 HOH HOH . 
R 5 HOH B 3 480 10 HOH HOH . 
R 5 HOH B 4 481 11 HOH HOH . 
R 5 HOH B 5 482 12 HOH HOH . 
R 5 HOH B 6 483 19 HOH HOH . 
R 5 HOH B 7 484 20 HOH HOH . 
R 5 HOH B 8 485 21 HOH HOH . 
R 5 HOH B 9 486 22 HOH HOH . 
R 5 HOH B 10 487 28 HOH HOH . 
R 5 HOH B 11 488 34 HOH HOH . 
R 5 HOH B 12 489 39 HOH HOH . 
R 5 HOH B 13 490 41 HOH HOH . 
R 5 HOH B 14 491 43 HOH HOH . 
R 5 HOH B 15 492 44 HOH HOH . 
R 5 HOH B 16 493 45 HOH HOH . 
R 5 HOH B 17 494 47 HOH HOH . 
R 5 HOH B 18 495 52 HOH HOH . 
R 5 HOH B 19 496 57 HOH HOH . 
R 5 HOH B 20 497 58 HOH HOH . 
R 5 HOH B 21 498 61 HOH HOH . 
R 5 HOH B 22 499 68 HOH HOH . 
R 5 HOH B 23 500 70 HOH HOH . 
R 5 HOH B 24 501 76 HOH HOH . 
R 5 HOH B 25 502 83 HOH HOH . 
R 5 HOH B 26 503 84 HOH HOH . 
R 5 HOH B 27 504 88 HOH HOH . 
R 5 HOH B 28 505 96 HOH HOH . 
R 5 HOH B 29 506 100 HOH HOH . 
R 5 HOH B 30 507 109 HOH HOH . 
R 5 HOH B 31 508 114 HOH HOH . 
R 5 HOH B 32 509 120 HOH HOH . 
R 5 HOH B 33 510 135 HOH HOH . 
R 5 HOH B 34 511 138 HOH HOH . 
R 5 HOH B 35 512 143 HOH HOH . 
R 5 HOH B 36 513 151 HOH HOH . 
R 5 HOH B 37 514 155 HOH HOH . 
R 5 HOH B 38 515 158 HOH HOH . 
R 5 HOH B 39 516 163 HOH HOH . 
S 5 HOH C 1 478 3 HOH HOH . 
S 5 HOH C 2 479 5 HOH HOH . 
S 5 HOH C 3 480 7 HOH HOH . 
S 5 HOH C 4 481 13 HOH HOH . 
S 5 HOH C 5 482 14 HOH HOH . 
S 5 HOH C 6 483 15 HOH HOH . 
S 5 HOH C 7 484 17 HOH HOH . 
S 5 HOH C 8 485 23 HOH HOH . 
S 5 HOH C 9 486 24 HOH HOH . 
S 5 HOH C 10 487 31 HOH HOH . 
S 5 HOH C 11 488 32 HOH HOH . 
S 5 HOH C 12 489 36 HOH HOH . 
S 5 HOH C 13 490 48 HOH HOH . 
S 5 HOH C 14 491 50 HOH HOH . 
S 5 HOH C 15 492 60 HOH HOH . 
S 5 HOH C 16 493 64 HOH HOH . 
S 5 HOH C 17 494 65 HOH HOH . 
S 5 HOH C 18 495 67 HOH HOH . 
S 5 HOH C 19 496 74 HOH HOH . 
S 5 HOH C 20 497 78 HOH HOH . 
S 5 HOH C 21 498 91 HOH HOH . 
S 5 HOH C 22 499 94 HOH HOH . 
S 5 HOH C 23 500 99 HOH HOH . 
S 5 HOH C 24 501 113 HOH HOH . 
S 5 HOH C 25 502 116 HOH HOH . 
S 5 HOH C 26 503 119 HOH HOH . 
S 5 HOH C 27 504 121 HOH HOH . 
S 5 HOH C 28 505 125 HOH HOH . 
S 5 HOH C 29 506 126 HOH HOH . 
S 5 HOH C 30 507 130 HOH HOH . 
S 5 HOH C 31 508 131 HOH HOH . 
S 5 HOH C 32 509 137 HOH HOH . 
S 5 HOH C 33 510 141 HOH HOH . 
S 5 HOH C 34 511 146 HOH HOH . 
S 5 HOH C 35 512 150 HOH HOH . 
S 5 HOH C 36 513 153 HOH HOH . 
S 5 HOH C 37 514 157 HOH HOH . 
S 5 HOH C 38 515 159 HOH HOH . 
S 5 HOH C 39 516 166 HOH HOH . 
S 5 HOH C 40 517 167 HOH HOH . 
T 5 HOH D 1 478 6 HOH HOH . 
T 5 HOH D 2 479 26 HOH HOH . 
T 5 HOH D 3 480 27 HOH HOH . 
T 5 HOH D 4 481 51 HOH HOH . 
T 5 HOH D 5 482 54 HOH HOH . 
T 5 HOH D 6 483 55 HOH HOH . 
T 5 HOH D 7 484 56 HOH HOH . 
T 5 HOH D 8 485 62 HOH HOH . 
T 5 HOH D 9 486 75 HOH HOH . 
T 5 HOH D 10 487 77 HOH HOH . 
T 5 HOH D 11 488 79 HOH HOH . 
T 5 HOH D 12 489 80 HOH HOH . 
T 5 HOH D 13 490 81 HOH HOH . 
T 5 HOH D 14 491 82 HOH HOH . 
T 5 HOH D 15 492 85 HOH HOH . 
T 5 HOH D 16 493 87 HOH HOH . 
T 5 HOH D 17 494 89 HOH HOH . 
T 5 HOH D 18 495 92 HOH HOH . 
T 5 HOH D 19 496 93 HOH HOH . 
T 5 HOH D 20 497 98 HOH HOH . 
T 5 HOH D 21 498 101 HOH HOH . 
T 5 HOH D 22 499 102 HOH HOH . 
T 5 HOH D 23 500 106 HOH HOH . 
T 5 HOH D 24 501 108 HOH HOH . 
T 5 HOH D 25 502 110 HOH HOH . 
T 5 HOH D 26 503 111 HOH HOH . 
T 5 HOH D 27 504 117 HOH HOH . 
T 5 HOH D 28 505 122 HOH HOH . 
T 5 HOH D 29 506 132 HOH HOH . 
T 5 HOH D 30 507 136 HOH HOH . 
T 5 HOH D 31 508 144 HOH HOH . 
T 5 HOH D 32 509 145 HOH HOH . 
T 5 HOH D 33 510 148 HOH HOH . 
T 5 HOH D 34 511 149 HOH HOH . 
T 5 HOH D 35 512 162 HOH HOH . 
T 5 HOH D 36 513 165 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 GSH . . . M 4 21.964 25.171 19.805 1 29.93 ? N1 GSH 477 C 1 
HETATM 2 C CA1 GSH . . . M 4 21.569 23.871 20.365 1 31.81 ? CA1 GSH 477 C 1 
HETATM 3 C C1 GSH . . . M 4 22.774 23.06 20.926 1 31.6 ? C1 GSH 477 C 1 
HETATM 4 O O11 GSH . . . M 4 23.913 23.442 20.657 1 31.54 ? O11 GSH 477 C 1 
HETATM 5 O O12 GSH . . . M 4 22.501 21.993 21.664 1 31.9 ? O12 GSH 477 C 1 
HETATM 6 C CB1 GSH . . . M 4 20.889 23.082 19.253 1 33.42 ? CB1 GSH 477 C 1 
HETATM 7 C CG1 GSH . . . M 4 19.59 22.369 19.724 1 36.3 ? CG1 GSH 477 C 1 
HETATM 8 C CD1 GSH . . . M 4 18.977 21.668 18.466 1 38.26 ? CD1 GSH 477 C 1 
HETATM 9 O OE1 GSH . . . M 4 18.784 22.312 17.421 1 39.49 ? OE1 GSH 477 C 1 
HETATM 10 N N2 GSH . . . M 4 18.678 20.348 18.638 1 37.1 ? N2 GSH 477 C 1 
HETATM 11 C CA2 GSH . . . M 4 17.76 19.656 17.724 1 35.89 ? CA2 GSH 477 C 1 
HETATM 12 C C2 GSH . . . M 4 16.478 19.241 18.475 1 37.86 ? C2 GSH 477 C 1 
HETATM 13 O O2 GSH . . . M 4 16.47 18.403 19.392 1 39.93 ? O2 GSH 477 C 1 
HETATM 14 C CB2 GSH . . . M 4 18.397 18.393 17.156 1 33.5 ? CB2 GSH 477 C 1 
HETATM 15 S SG2 GSH . . . M 4 19.656 18.754 15.893 1 32.42 ? SG2 GSH 477 C 1 
HETATM 16 N N3 GSH . . . M 4 15.348 19.846 18.074 1 38.13 ? N3 GSH 477 C 1 
HETATM 17 C CA3 GSH . . . M 4 14.321 20.303 19.017 1 41.91 ? CA3 GSH 477 C 1 
HETATM 18 C C3 GSH . . . M 4 13.686 21.583 18.493 1 43.62 ? C3 GSH 477 C 1 
HETATM 19 O O31 GSH . . . M 4 12.481 21.74 18.746 1 43.59 ? O31 GSH 477 C 1 
HETATM 20 O O32 GSH . . . M 4 14.406 22.404 17.853 1 44.48 ? O32 GSH 477 C 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           20 
#