data_2PC1 # _model_server_result.job_id OIgM9c04q_JRsl5UuRAbeQ _model_server_result.datetime_utc '2024-11-09 02:36:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pc1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":185}' # _entry.id 2PC1 # _exptl.entry_id 2PC1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 94.22 _cell.angle_beta 109.42 _cell.angle_gamma 113.08 _cell.entry_id 2PC1 _cell.length_a 35.48 _cell.length_b 37.65 _cell.length_c 41.5 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PC1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 19 A GLY 0 1_555 A N MSE 20 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 20 A MSE 1 1_555 A N GLN 21 A GLN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale3 A C ILE 33 A ILE 14 1_555 A N MSE 34 A MSE 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C MSE 34 A MSE 15 1_555 A N LEU 35 A LEU 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C GLY 80 A GLY 61 1_555 A N MSE 81 A MSE 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C MSE 81 A MSE 62 1_555 A N LEU 82 A LEU 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale7 A C THR 155 A THR 136 1_555 A N MSE 156 A MSE 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale8 A C MSE 156 A MSE 137 1_555 A N GLN 157 A GLN 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 2PC1 _atom_sites.fract_transf_matrix[1][1] 0.02819 _atom_sites.fract_transf_matrix[1][2] 0.01201 _atom_sites.fract_transf_matrix[1][3] 0.01313 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02887 _atom_sites.fract_transf_matrix[2][3] 0.00698 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02629 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 183 1 SO4 SO4 . C 2 SO4 A 1 184 2 SO4 SO4 . D 3 GOL A 1 185 3 GOL GOL . E 4 HOH A 1 186 4 HOH HOH . E 4 HOH A 2 187 5 HOH HOH . E 4 HOH A 3 188 6 HOH HOH . E 4 HOH A 4 189 7 HOH HOH . E 4 HOH A 5 190 8 HOH HOH . E 4 HOH A 6 191 9 HOH HOH . E 4 HOH A 7 192 10 HOH HOH . E 4 HOH A 8 193 11 HOH HOH . E 4 HOH A 9 194 12 HOH HOH . E 4 HOH A 10 195 13 HOH HOH . E 4 HOH A 11 196 14 HOH HOH . E 4 HOH A 12 197 15 HOH HOH . E 4 HOH A 13 198 16 HOH HOH . E 4 HOH A 14 199 17 HOH HOH . E 4 HOH A 15 200 18 HOH HOH . E 4 HOH A 16 201 19 HOH HOH . E 4 HOH A 17 202 20 HOH HOH . E 4 HOH A 18 203 21 HOH HOH . E 4 HOH A 19 204 22 HOH HOH . E 4 HOH A 20 205 23 HOH HOH . E 4 HOH A 21 206 24 HOH HOH . E 4 HOH A 22 207 25 HOH HOH . E 4 HOH A 23 208 26 HOH HOH . E 4 HOH A 24 209 27 HOH HOH . E 4 HOH A 25 210 28 HOH HOH . E 4 HOH A 26 211 29 HOH HOH . E 4 HOH A 27 212 30 HOH HOH . E 4 HOH A 28 213 31 HOH HOH . E 4 HOH A 29 214 32 HOH HOH . E 4 HOH A 30 215 33 HOH HOH . E 4 HOH A 31 216 34 HOH HOH . E 4 HOH A 32 217 35 HOH HOH . E 4 HOH A 33 218 36 HOH HOH . E 4 HOH A 34 219 37 HOH HOH . E 4 HOH A 35 220 38 HOH HOH . E 4 HOH A 36 221 39 HOH HOH . E 4 HOH A 37 222 40 HOH HOH . E 4 HOH A 38 223 41 HOH HOH . E 4 HOH A 39 224 42 HOH HOH . E 4 HOH A 40 225 43 HOH HOH . E 4 HOH A 41 226 44 HOH HOH . E 4 HOH A 42 227 45 HOH HOH . E 4 HOH A 43 228 46 HOH HOH . E 4 HOH A 44 229 47 HOH HOH . E 4 HOH A 45 230 48 HOH HOH . E 4 HOH A 46 231 49 HOH HOH . E 4 HOH A 47 232 50 HOH HOH . E 4 HOH A 48 233 51 HOH HOH . E 4 HOH A 49 234 52 HOH HOH . E 4 HOH A 50 235 53 HOH HOH . E 4 HOH A 51 236 54 HOH HOH . E 4 HOH A 52 237 55 HOH HOH . E 4 HOH A 53 238 56 HOH HOH . E 4 HOH A 54 239 57 HOH HOH . E 4 HOH A 55 240 58 HOH HOH . E 4 HOH A 56 241 59 HOH HOH . E 4 HOH A 57 242 60 HOH HOH . E 4 HOH A 58 243 61 HOH HOH . E 4 HOH A 59 244 62 HOH HOH . E 4 HOH A 60 245 63 HOH HOH . E 4 HOH A 61 246 64 HOH HOH . E 4 HOH A 62 247 65 HOH HOH . E 4 HOH A 63 248 66 HOH HOH . E 4 HOH A 64 249 67 HOH HOH . E 4 HOH A 65 250 68 HOH HOH . E 4 HOH A 66 251 69 HOH HOH . E 4 HOH A 67 252 70 HOH HOH . E 4 HOH A 68 253 71 HOH HOH . E 4 HOH A 69 254 72 HOH HOH . E 4 HOH A 70 255 73 HOH HOH . E 4 HOH A 71 256 74 HOH HOH . E 4 HOH A 72 257 75 HOH HOH . E 4 HOH A 73 258 76 HOH HOH . E 4 HOH A 74 259 77 HOH HOH . E 4 HOH A 75 260 78 HOH HOH . E 4 HOH A 76 261 79 HOH HOH . E 4 HOH A 77 262 80 HOH HOH . E 4 HOH A 78 263 81 HOH HOH . E 4 HOH A 79 264 82 HOH HOH . E 4 HOH A 80 265 83 HOH HOH . E 4 HOH A 81 266 84 HOH HOH . E 4 HOH A 82 267 85 HOH HOH . E 4 HOH A 83 268 86 HOH HOH . E 4 HOH A 84 269 87 HOH HOH . E 4 HOH A 85 270 88 HOH HOH . E 4 HOH A 86 271 89 HOH HOH . E 4 HOH A 87 272 90 HOH HOH . E 4 HOH A 88 273 91 HOH HOH . E 4 HOH A 89 274 92 HOH HOH . E 4 HOH A 90 275 93 HOH HOH . E 4 HOH A 91 276 94 HOH HOH . E 4 HOH A 92 277 95 HOH HOH . E 4 HOH A 93 278 96 HOH HOH . E 4 HOH A 94 279 97 HOH HOH . E 4 HOH A 95 280 98 HOH HOH . E 4 HOH A 96 281 99 HOH HOH . E 4 HOH A 97 282 100 HOH HOH . E 4 HOH A 98 283 101 HOH HOH . E 4 HOH A 99 284 102 HOH HOH . E 4 HOH A 100 285 103 HOH HOH . E 4 HOH A 101 286 104 HOH HOH . E 4 HOH A 102 287 105 HOH HOH . E 4 HOH A 103 288 106 HOH HOH . E 4 HOH A 104 289 107 HOH HOH . E 4 HOH A 105 290 108 HOH HOH . E 4 HOH A 106 291 109 HOH HOH . E 4 HOH A 107 292 110 HOH HOH . E 4 HOH A 108 293 111 HOH HOH . E 4 HOH A 109 294 112 HOH HOH . E 4 HOH A 110 295 113 HOH HOH . E 4 HOH A 111 296 114 HOH HOH . E 4 HOH A 112 297 115 HOH HOH . E 4 HOH A 113 298 116 HOH HOH . E 4 HOH A 114 299 117 HOH HOH . E 4 HOH A 115 300 118 HOH HOH . E 4 HOH A 116 301 119 HOH HOH . E 4 HOH A 117 302 120 HOH HOH . E 4 HOH A 118 303 121 HOH HOH . E 4 HOH A 119 304 122 HOH HOH . E 4 HOH A 120 305 123 HOH HOH . E 4 HOH A 121 306 124 HOH HOH . E 4 HOH A 122 307 125 HOH HOH . E 4 HOH A 123 308 126 HOH HOH . E 4 HOH A 124 309 127 HOH HOH . E 4 HOH A 125 310 128 HOH HOH . E 4 HOH A 126 311 129 HOH HOH . E 4 HOH A 127 312 130 HOH HOH . E 4 HOH A 128 313 131 HOH HOH . E 4 HOH A 129 314 132 HOH HOH . E 4 HOH A 130 315 133 HOH HOH . E 4 HOH A 131 316 134 HOH HOH . E 4 HOH A 132 317 135 HOH HOH . E 4 HOH A 133 318 136 HOH HOH . E 4 HOH A 134 319 137 HOH HOH . E 4 HOH A 135 320 138 HOH HOH . E 4 HOH A 136 321 139 HOH HOH . E 4 HOH A 137 322 140 HOH HOH . E 4 HOH A 138 323 141 HOH HOH . E 4 HOH A 139 324 142 HOH HOH . E 4 HOH A 140 325 143 HOH HOH . E 4 HOH A 141 326 144 HOH HOH . E 4 HOH A 142 327 145 HOH HOH . E 4 HOH A 143 328 146 HOH HOH . E 4 HOH A 144 329 147 HOH HOH . E 4 HOH A 145 330 148 HOH HOH . E 4 HOH A 146 331 149 HOH HOH . E 4 HOH A 147 332 150 HOH HOH . E 4 HOH A 148 333 151 HOH HOH . E 4 HOH A 149 334 152 HOH HOH . E 4 HOH A 150 335 153 HOH HOH . E 4 HOH A 151 336 154 HOH HOH . E 4 HOH A 152 337 155 HOH HOH . E 4 HOH A 153 338 156 HOH HOH . E 4 HOH A 154 339 157 HOH HOH . E 4 HOH A 155 340 158 HOH HOH . E 4 HOH A 156 341 159 HOH HOH . E 4 HOH A 157 342 160 HOH HOH . E 4 HOH A 158 343 161 HOH HOH . E 4 HOH A 159 344 162 HOH HOH . E 4 HOH A 160 345 163 HOH HOH . E 4 HOH A 161 346 164 HOH HOH . E 4 HOH A 162 347 165 HOH HOH . E 4 HOH A 163 348 166 HOH HOH . E 4 HOH A 164 349 167 HOH HOH . E 4 HOH A 165 350 168 HOH HOH . E 4 HOH A 166 351 169 HOH HOH . E 4 HOH A 167 352 170 HOH HOH . E 4 HOH A 168 353 171 HOH HOH . E 4 HOH A 169 354 172 HOH HOH . E 4 HOH A 170 355 173 HOH HOH . E 4 HOH A 171 356 174 HOH HOH . E 4 HOH A 172 357 175 HOH HOH . E 4 HOH A 173 358 176 HOH HOH . E 4 HOH A 174 359 177 HOH HOH . E 4 HOH A 175 360 178 HOH HOH . E 4 HOH A 176 361 179 HOH HOH . E 4 HOH A 177 362 180 HOH HOH . E 4 HOH A 178 363 181 HOH HOH . E 4 HOH A 179 364 182 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 3 -0.02 32.576 22.568 1 39.52 ? C1 GOL 185 A 1 HETATM 2 O O1 GOL . . . D 3 -0.031 31.183 22.448 1 38.42 ? O1 GOL 185 A 1 HETATM 3 C C2 GOL . . . D 3 0.856 33.11 21.446 1 43.55 ? C2 GOL 185 A 1 HETATM 4 O O2 GOL . . . D 3 2.164 32.684 21.712 1 39.5 ? O2 GOL 185 A 1 HETATM 5 C C3 GOL . . . D 3 0.822 34.634 21.375 1 48.18 ? C3 GOL 185 A 1 HETATM 6 O O3 GOL . . . D 3 -0.246 35.137 22.153 1 55.24 ? O3 GOL 185 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #