data_2PE0
#
_model_server_result.job_id            6y4W9SSF9954PwZMvhX7BA 
_model_server_result.datetime_utc      '2025-01-10 21:17:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2pe0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":501}' 
#
_entry.id    2PE0 
#
_exptl.entry_id    2PE0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              240.257 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-HYDROXY-3-[(1R)-1-(1H-PYRROL-2-YL)ETHYL]-2H-INDOL-2-ONE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2PE0 
_cell.length_a            123.951 
_cell.length_b            123.951 
_cell.length_c            47.217 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2PE0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            C 
_struct_conn.ptnr1_label_comp_id            SEP 
_struct_conn.ptnr1_label_seq_id             168 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             SEP 
_struct_conn.ptnr1_auth_seq_id              241 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            N 
_struct_conn.ptnr2_label_comp_id            PHE 
_struct_conn.ptnr2_label_seq_id             169 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             PHE 
_struct_conn.ptnr2_auth_seq_id              242 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.331 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C14 H12 N2 O2' 
_chem_comp.formula_weight    240.257 
_chem_comp.id                39Z 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-HYDROXY-3-[(1R)-1-(1H-PYRROL-2-YL)ETHYL]-2H-INDOL-2-ONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C3 N1 39Z sing 1 n n 
C3 C5 39Z sing 2 n n 
C3 O4 39Z doub 3 n n 
C5 C7 39Z doub 4 n n 
C5 C19 39Z sing 5 n n 
C6 C11 39Z sing 6 n y 
C6 N1 39Z doub 7 n n 
C6 C7 39Z sing 8 n y 
C7 C8 39Z sing 9 n y 
C8 C9 39Z doub 10 n y 
C8 H8 39Z sing 11 n n 
C9 C10 39Z sing 12 n y 
C9 O12 39Z sing 13 n n 
C10 C11 39Z doub 14 n y 
C10 H10 39Z sing 15 n n 
C11 H11 39Z sing 16 n n 
C19 C20 39Z sing 17 n n 
C19 C21 39Z sing 18 n n 
C19 H19 39Z sing 19 n n 
C20 H201 39Z sing 20 n n 
C20 H202 39Z sing 21 n n 
C20 H203 39Z sing 22 n n 
C21 N22 39Z sing 23 n n 
C21 C26 39Z doub 24 n n 
O12 HO12 39Z sing 25 n n 
C26 C25 39Z sing 26 n n 
C26 H26 39Z sing 27 n n 
C25 C24 39Z doub 28 n n 
C25 H25 39Z sing 29 n n 
C24 N22 39Z sing 30 n n 
C24 H24 39Z sing 31 n n 
N22 HN22 39Z sing 32 n n 
#
_atom_sites.entry_id                     2PE0 
_atom_sites.fract_transf_matrix[1][1]    0.008068 
_atom_sites.fract_transf_matrix[1][2]    0.004658 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009316 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021179 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 600 600 SO4 SO4 . 
C 2 SO4 A 1 601 601 SO4 SO4 . 
D 3 39Z A 1 501 501 39Z 39Z . 
E 4 GOL A 1 602 602 GOL GOL . 
F 4 GOL A 1 603 603 GOL GOL . 
G 4 GOL A 1 604 604 GOL GOL . 
H 5 HOH A 1 701 701 HOH HOH . 
H 5 HOH A 2 702 702 HOH HOH . 
H 5 HOH A 3 703 703 HOH HOH . 
H 5 HOH A 4 704 704 HOH HOH . 
H 5 HOH A 5 705 705 HOH HOH . 
H 5 HOH A 6 707 707 HOH HOH . 
H 5 HOH A 7 710 710 HOH HOH . 
H 5 HOH A 8 711 711 HOH HOH . 
H 5 HOH A 9 712 712 HOH HOH . 
H 5 HOH A 10 715 715 HOH HOH . 
H 5 HOH A 11 719 719 HOH HOH . 
H 5 HOH A 12 723 723 HOH HOH . 
H 5 HOH A 13 725 725 HOH HOH . 
H 5 HOH A 14 727 727 HOH HOH . 
H 5 HOH A 15 733 733 HOH HOH . 
H 5 HOH A 16 740 740 HOH HOH . 
H 5 HOH A 17 746 746 HOH HOH . 
H 5 HOH A 18 750 750 HOH HOH . 
H 5 HOH A 19 762 762 HOH HOH . 
H 5 HOH A 20 763 763 HOH HOH . 
H 5 HOH A 21 769 769 HOH HOH . 
H 5 HOH A 22 770 770 HOH HOH . 
H 5 HOH A 23 771 771 HOH HOH . 
H 5 HOH A 24 772 772 HOH HOH . 
H 5 HOH A 25 773 773 HOH HOH . 
H 5 HOH A 26 774 774 HOH HOH . 
H 5 HOH A 27 775 775 HOH HOH . 
H 5 HOH A 28 776 776 HOH HOH . 
H 5 HOH A 29 778 778 HOH HOH . 
H 5 HOH A 30 780 780 HOH HOH . 
H 5 HOH A 31 782 782 HOH HOH . 
H 5 HOH A 32 783 783 HOH HOH . 
H 5 HOH A 33 791 791 HOH HOH . 
H 5 HOH A 34 792 792 HOH HOH . 
H 5 HOH A 35 793 793 HOH HOH . 
H 5 HOH A 36 796 796 HOH HOH . 
H 5 HOH A 37 797 797 HOH HOH . 
H 5 HOH A 38 800 800 HOH HOH . 
H 5 HOH A 39 801 801 HOH HOH . 
H 5 HOH A 40 802 802 HOH HOH . 
H 5 HOH A 41 803 803 HOH HOH . 
H 5 HOH A 42 805 805 HOH HOH . 
H 5 HOH A 43 806 806 HOH HOH . 
H 5 HOH A 44 807 807 HOH HOH . 
H 5 HOH A 45 808 808 HOH HOH . 
H 5 HOH A 46 809 809 HOH HOH . 
H 5 HOH A 47 810 810 HOH HOH . 
H 5 HOH A 48 811 811 HOH HOH . 
H 5 HOH A 49 812 812 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C3 39Z . . . D 3 -8.157 41.329 44.33 1 17.07 ? C3 39Z 501 A 1 
HETATM 2 C C5 39Z . . . D 3 -7 42.115 44.404 1 19.51 ? C5 39Z 501 A 1 
HETATM 3 C C6 39Z . . . D 3 -8.752 43.287 43.588 1 14.27 ? C6 39Z 501 A 1 
HETATM 4 C C7 39Z . . . D 3 -7.378 43.383 43.922 1 18.86 ? C7 39Z 501 A 1 
HETATM 5 C C8 39Z . . . D 3 -6.704 44.613 43.732 1 16.95 ? C8 39Z 501 A 1 
HETATM 6 C C9 39Z . . . D 3 -7.391 45.724 43.221 1 17.06 ? C9 39Z 501 A 1 
HETATM 7 C C10 39Z . . . D 3 -8.754 45.624 42.896 1 17.6 ? C10 39Z 501 A 1 
HETATM 8 C C11 39Z . . . D 3 -9.433 44.408 43.079 1 16.07 ? C11 39Z 501 A 1 
HETATM 9 C C19 39Z . . . D 3 -5.687 41.728 44.896 1 20.1 ? C19 39Z 501 A 1 
HETATM 10 C C20 39Z . . . D 3 -4.561 42.782 45.001 1 19.52 ? C20 39Z 501 A 1 
HETATM 11 C C21 39Z . . . D 3 -5.362 40.409 45.317 1 18.59 ? C21 39Z 501 A 1 
HETATM 12 O O4 39Z . . . D 3 -8.266 40.156 44.667 1 17.8 ? O4 39Z 501 A 1 
HETATM 13 N N1 39Z . . . D 3 -9.172 42.043 43.845 1 14.39 ? N1 39Z 501 A 1 
HETATM 14 O O12 39Z . . . D 3 -6.731 46.891 43.02 1 19.47 ? O12 39Z 501 A 1 
HETATM 15 C C26 39Z . . . D 3 -4.184 40.024 45.823 1 19.88 ? C26 39Z 501 A 1 
HETATM 16 C C25 39Z . . . D 3 -4.248 38.725 46.113 1 19.79 ? C25 39Z 501 A 1 
HETATM 17 C C24 39Z . . . D 3 -5.463 38.296 45.79 1 17.84 ? C24 39Z 501 A 1 
HETATM 18 N N22 39Z . . . D 3 -6.146 39.329 45.301 1 18.76 ? N22 39Z 501 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           352 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           18 
#